RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.85□□□□□ -0.19
VARS2-206ENST00000473916 BUB3O43684 328 aa13.85□□□□□ -0.19
VARS2-206ENST00000473916 RPL7P18124 248 aaKnown RBP13.85□□□□□ -0.19
VARS2-206ENST00000473916 S100PP25815 95 aa13.85□□□□□ -0.19
VARS2-206ENST00000473916 RELQ04864 619 aaPredicted RBP13.85□□□□□ -0.19
VARS2-206ENST00000473916 S100A7AQ86SG5 101 aa13.85□□□□□ -0.19
VARS2-206ENST00000473916 USMG5Q96IX5 58 aa13.85□□□□□ -0.19
VARS2-206ENST00000473916 PPP1R2P9O14990 202 aa13.84□□□□□ -0.19
VARS2-206ENST00000473916 GGCTO75223 188 aaKnown RBP13.84□□□□□ -0.19
VARS2-206ENST00000473916 IGLV2-11P01706 119 aa13.84□□□□□ -0.19
VARS2-206ENST00000473916 TRGC2P03986 189 aa13.84□□□□□ -0.19
VARS2-206ENST00000473916 HLA-DMBP28068 263 aa13.84□□□□□ -0.19
VARS2-206ENST00000473916 SRP14P37108 136 aaKnown RBP13.84□□□□□ -0.19
VARS2-206ENST00000473916 RAB5BP61020 215 aa13.84□□□□□ -0.19
VARS2-206ENST00000473916 CMTM2Q8TAZ6 248 aa13.84□□□□□ -0.19
VARS2-206ENST00000473916 ANK3Q12955 4377 aaKnown RBP13.83□□□□□ -0.19
VARS2-206ENST00000473916 PSMB8P28062 276 aa13.83□□□□□ -0.2
VARS2-206ENST00000473916 PRR27Q6MZM9 219 aa13.83□□□□□ -0.2
VARS2-206ENST00000473916 CA1P00915 261 aaPredicted RBP13.83□□□□□ -0.2
VARS2-206ENST00000473916 IGHG4P01861 327 aa13.83□□□□□ -0.2
VARS2-206ENST00000473916 RNF24Q9Y225 148 aa13.83□□□□□ -0.2
VARS2-206ENST00000473916 NF1P21359 2839 aa13.82□□□□□ -0.2
VARS2-206ENST00000473916 LINC00322Q6ZN03 302 aaPredicted RBP13.82□□□□□ -0.2
VARS2-206ENST00000473916 Q86TA4 180 aa13.82□□□□□ -0.2
VARS2-206ENST00000473916 ZNF580Q9UK33 172 aa13.82□□□□□ -0.2
VARS2-206ENST00000473916 LTAP01374 205 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 PDE6HQ13956 83 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 IBA57Q5T440 356 aaKnown RBP13.81□□□□□ -0.2
VARS2-206ENST00000473916 FMC1Q96HJ9 113 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 METTL26Q96S19 204 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 ATP6V0BQ99437 205 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 PRSS22Q9GZN4 317 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 SAV1Q9H4B6 383 aaPredicted RBP13.81□□□□□ -0.2
VARS2-206ENST00000473916 ZNF320A2RRD8 509 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 RPLP1P05386 114 aaKnown RBP13.81□□□□□ -0.2
VARS2-206ENST00000473916 MTORP42345 2549 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 KCNIP4Q6PIL6 250 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 PRNTQ86SH4 94 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 LYPD1Q8N2G4 141 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 GPR82Q96P67 336 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 MLST8Q9BVC4 326 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 NPFFR1Q9GZQ6 430 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 IL36BQ9NZH7 164 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 U3KQE9 123 aa13.81□□□□□ -0.2
VARS2-206ENST00000473916 DIRC3C9JPN6 131 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 PHOX2AO14813 284 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 OSTCQ9NRP0 149 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 SERTAD4Q9NUC0 356 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 NOTCH2Q04721 2471 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 A0A0G2JLM5 398 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 FRMD6-AS1P0C7T7 363 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 TCL1AP56279 114 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 FOXL1Q12952 345 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 IMMP2LQ96T52 175 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 YAE1D1Q9NRH1 226 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 SELENOKQ9Y6D0 94 aa13.8□□□□□ -0.2
VARS2-206ENST00000473916 ZNF705FA8MVS1 300 aaPredicted RBP13.79□□□□□ -0.2
VARS2-206ENST00000473916 EDN2P20800 178 aa13.79□□□□□ -0.2
VARS2-206ENST00000473916 SNRPEP62304 92 aaKnown RBP13.79□□□□□ -0.2
VARS2-206ENST00000473916 RNF182Q8N6D2 247 aa13.79□□□□□ -0.2
VARS2-206ENST00000473916 FRZBQ92765 325 aa13.79□□□□□ -0.2
VARS2-206ENST00000473916 AAMDCQ9H7C9 122 aa13.79□□□□□ -0.2
VARS2-206ENST00000473916 SRD5A3Q9H8P0 318 aa13.79□□□□□ -0.2
VARS2-206ENST00000473916 IGKV2-40A0A087WW87 121 aaPredicted RBP13.78□□□□□ -0.2
VARS2-206ENST00000473916 ZNF785A8K8V0 405 aa13.78□□□□□ -0.2
VARS2-206ENST00000473916 NDUFA4O00483 81 aa13.78□□□□□ -0.2
VARS2-206ENST00000473916 IGKV2D-40P01614 121 aaPredicted RBP13.78□□□□□ -0.2
VARS2-206ENST00000473916 NUDT10Q8NFP7 164 aa13.78□□□□□ -0.2
VARS2-206ENST00000473916 NUDT11Q96G61 164 aa13.78□□□□□ -0.2
VARS2-206ENST00000473916 ZNF331Q9NQX6 463 aaPredicted RBP13.78□□□□□ -0.2
VARS2-206ENST00000473916 ZNF705GA8MUZ8 300 aaPredicted RBP13.78□□□□□ -0.2
VARS2-206ENST00000473916 CD5LO43866 347 aa13.78□□□□□ -0.2
VARS2-206ENST00000473916 RPEL1Q2QD12 228 aa13.78□□□□□ -0.2
VARS2-206ENST00000473916 SMR3AQ99954 134 aa13.78□□□□□ -0.2
VARS2-206ENST00000473916 HIST1H2BKO60814 126 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 HIST1H2BJP06899 126 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 HIST1H2BOP23527 126 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 HIST1H2BBP33778 126 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 HIST1H2BDP58876 126 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 HIST1H2BCP62807 126 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 SLC35B1P78383 322 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 PSG9Q00887 426 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 HIST2H2BEQ16778 126 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.77□□□□□ -0.21
VARS2-206ENST00000473916 HIST1H2BHQ93079 126 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 HIST1H2BNQ99877 126 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 HIST1H2BMQ99879 126 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 OTOGQ6ZRI0 2925 aa13.77□□□□□ -0.21
VARS2-206ENST00000473916 A0A087X0K7 114 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 DNAJC9-AS1A6NH13 148 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 SPINK4O60575 86 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 TYMSP04818 313 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 PSG3Q16557 428 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 SMUG1Q53HV7 270 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 HIST2H2BDQ6DRA6 164 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 TMEM75Q8N9X5 138 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 ESM1Q9NQ30 184 aa13.76□□□□□ -0.21
VARS2-206ENST00000473916 PEF1Q9UBV8 284 aaKnown RBP13.76□□□□□ -0.21
VARS2-206ENST00000473916 S100A9P06702 114 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms