RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 MGST2Q99735 147 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 SEC22CQ9BRL7 303 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 TMEM147Q9BVK8 224 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 C11orf1Q9H5F2 150 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 CACFD1Q9UGQ2 172 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 SLC45A2Q9UMX9 530 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 HIGD1AQ9Y241 93 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 GOLT1BQ9Y3E0 138 aa5.67□□□□□ -1.5
USP48-207ENST00000471752 FAM24AA6NFZ4 105 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 FABP1P07148 127 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 P0DMU3 169 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 FAM231AP0DMU4 169 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 FAM231CP0DMU5 169 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 IL7P13232 177 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 PLP1P60201 277 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 DAD1P61803 113 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 TNP2Q05952 138 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 LGALS9BQ3B8N2 356 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 C4orf46Q504U0 113 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 ZNF738Q8NE65 137 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 OR8A1Q8NGG7 326 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 LINC01587Q99440 93 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 TMEM208Q9BTX3 173 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 ARV1Q9H2C2 271 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 NACAE9PAV3 2078 aa5.66□□□□□ -1.5
USP48-207ENST00000471752 TRAV6A0A075B6T7 132 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 TMEM189A5PLL7 270 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 J3KRW8 73 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 AGPAT2O15120 278 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 CST7O76096 145 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 NUP62P37198 522 aaPredicted RBP5.65□□□□□ -1.5
USP48-207ENST00000471752 RHOBP62745 196 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 RPP30P78346 268 aaKnown RBP5.65□□□□□ -1.5
USP48-207ENST00000471752 DLK1P80370 383 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 OPCMLQ14982 345 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 OXA1LQ15070 435 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 SPANXN2Q5MJ10 180 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 SPATA31B1PQ5VZV4 182 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 MIC13Q5XKP0 118 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 TRIQKQ629K1 86 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 MITD1Q8WV92 249 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 RPUSD4Q96CM3 377 aaKnown RBP5.65□□□□□ -1.5
USP48-207ENST00000471752 NPVFQ9HCQ7 196 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 PFDN2Q9UHV9 154 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 DNAH8Q96JB1 4490 aa5.65□□□□□ -1.5
USP48-207ENST00000471752 MUC4Q99102 2169 aa5.65□□□□□ -1.51
USP48-207ENST00000471752 A0A087X0K7 114 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 NAP1L6A6NFF2 107 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 FAM25EA8MYX2 175 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 F5H768 121 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 BOLA2-SMG1P6H3BVE0 249 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 K7EPK0 472 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 DUSP14O95147 198 aaKnown RBP5.64□□□□□ -1.51
USP48-207ENST00000471752 CFDP00746 253 aaPredicted RBP5.64□□□□□ -1.51
USP48-207ENST00000471752 INSP01308 110 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 IFNA21P01568 189 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 CT45A10P0DMU9 189 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 HOXA5P20719 270 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 MEOX2P50222 304 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 ERCC8Q13216 396 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 IL15RAQ13261 267 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 GCSAMLQ5JQS6 135 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 LINC00305Q7Z4B0 112 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 UBE2DNLQ8IWF7 75 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 SAT2Q96F10 170 aaPredicted RBP5.64□□□□□ -1.51
USP48-207ENST00000471752 KRTAP1-5Q9BYS1 174 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 NOP10Q9NPE3 64 aaKnown RBP5.64□□□□□ -1.51
USP48-207ENST00000471752 ZNF331Q9NQX6 463 aaPredicted RBP5.64□□□□□ -1.51
USP48-207ENST00000471752 LINC00588Q9Y4M8 146 aa5.64□□□□□ -1.51
USP48-207ENST00000471752 LSM5Q9Y4Y9 91 aaKnown RBP5.64□□□□□ -1.51
USP48-207ENST00000471752 IGSF23A1L1A6 192 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 A6NJY4 79 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 SIX6O95475 246 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 NUDT3O95989 172 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 IGLC2P0DOY2 106 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 RPL7P18124 248 aaKnown RBP5.63□□□□□ -1.51
USP48-207ENST00000471752 RAP2BP61225 183 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 GFI1BQ5VTD9 330 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 TEPPQ6URK8 271 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 LINC00336Q6ZUF6 198 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 OR10P1Q8NGE3 313 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 ZNRF2Q8NHG8 242 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 RNF141Q8WVD5 230 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 GPR82Q96P67 336 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 C20orf85Q9H1P6 137 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 ZNF586Q9NXT0 402 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 VPS13BQ7Z7G8 4022 aa5.63□□□□□ -1.51
USP48-207ENST00000471752 A0A0J9YY99 117 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 LYRM9A8MSI8 78 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 ZNF701M0R085 212 aaPredicted RBP5.62□□□□□ -1.51
USP48-207ENST00000471752 M0R3E3 92 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 GOSR2O14653 212 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 LYRM1O43325 122 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 TSC22D2O75157 780 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 EIF3GO75821 320 aaKnown RBP eCLIP5.62□□□□□ -1.51
USP48-207ENST00000471752 NDUFB4O95168 129 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 TCRBP04435 133 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 INPP1P49441 399 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 SELENOTP62341 195 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 RNF212Q495C1 297 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms