RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 TRBV20-1A0A075B6N2 111 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 LOC285095A0A1B0GVY8 99 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 LOC107986453A0A1B0GWG9 222 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF860A6NHJ4 632 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 A8MUN3 132 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF727A8MUV8 499 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 SOCS3O14543 225 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 SERF1AO75920 110 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 CST7O76096 145 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 GAS8-AS1O95177 125 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 LTAP01374 205 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 IGLV2-23P01705 113 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 CXCL1P09341 107 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF688P0C7X2 276 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 GLI2P10070 1586 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 PTHLHP12272 177 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 HLA-DRB4P13762 266 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 COX7CP15954 63 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 FAUP35544 74 aaKnown RBP2.38□□□□□ -2.03
SCN3A-207ENST00000471697 NMUP48645 174 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 EBI3Q14213 229 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 DIAPH2-AS1Q14236 149 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 COL24A1Q17RW2 1714 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 LGALS9BQ3B8N2 356 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF497Q6ZNH5 498 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 LINC00305Q7Z4B0 112 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 SMIM29Q86T20 159 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 VWDEQ8N2E2 1590 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 TOMM5Q8N4H5 51 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 CMTM2Q8TAZ6 248 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 RBMXL1Q96E39 390 aaKnown RBP2.38□□□□□ -2.03
SCN3A-207ENST00000471697 VSIG2Q96IQ7 327 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 CARD19Q96LW7 228 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 OTORQ9NRC9 128 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 SLC39A9Q9NUM3 307 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 PCTPQ9UKL6 214 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 HLA-DRB4X5D2U9 266 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 DOCK8Q8NF50 2099 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 RGPD8O14715 1765 aaPredicted RBP2.38□□□□□ -2.03
SCN3A-207ENST00000471697 RGPD5Q99666 1765 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 NESP48681 1621 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 C1orf167Q5SNV9 1468 aa2.38□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF646O15015 1829 aaPredicted RBP2.38□□□□□ -2.03
SCN3A-207ENST00000471697 E9PCH4 1651 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 IQGAP1P46940 1657 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 TRPM7Q96QT4 1865 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 NINQ8N4C6 2090 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 PIKFYVEQ9Y2I7 2098 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 RGPD3A6NKT7 1758 aaPredicted RBP2.37□□□□□ -2.03
SCN3A-207ENST00000471697 ANKRD36CQ5JPF3 1778 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 TRBV6-7A0A0A0MS04 114 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 TRGV5A0A0B4J1U4 118 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 A0A0J9YXY3 114 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 FAM236AA0A1B0GUQ0 79 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 FAM236BA0A1B0GV22 79 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 ZFP92A6NM28 416 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 C9JQL5 133 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 H3BT86 120 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 SYS1-DBNDD2H3BUS1 97 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 COX7A2LO14548 114 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF737O75373 536 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 GYPBP06028 91 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 SMIM13P0DJ93 91 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 PIPP12273 146 aaPredicted RBP2.37□□□□□ -2.03
SCN3A-207ENST00000471697 PLA2G2AP14555 144 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 MPV17L2Q567V2 206 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 EBLN2Q6P2I7 272 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 CEMP1Q6PRD7 247 aaPredicted RBP2.37□□□□□ -2.03
SCN3A-207ENST00000471697 KTN1-AS1Q86SY8 53 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 WDR86Q86TI4 376 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 TEN1Q86WV5 123 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 BPIFA4PQ86YQ2 179 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 SAXO1Q8IYX7 474 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 OR10G2Q8NGC3 310 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 MYOZ3Q8TDC0 251 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 ABHD14BQ96IU4 210 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 PRELID3AQ96N28 172 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 MGST2Q99735 147 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 NAA38Q9BRA0 125 aaKnown RBP2.37□□□□□ -2.03
SCN3A-207ENST00000471697 TM2D3Q9BRN9 247 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 PLA2G2FQ9BZM2 168 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 C11orf68Q9H3H3 251 aaKnown RBP2.37□□□□□ -2.03
SCN3A-207ENST00000471697 C6orf106Q9H6K1 298 aaPredicted RBP2.37□□□□□ -2.03
SCN3A-207ENST00000471697 FGF22Q9HCT0 170 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 TAC3Q9UHF0 121 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 ZFC3H1O60293 1989 aaKnown RBP2.37□□□□□ -2.03
SCN3A-207ENST00000471697 NOTCH3Q9UM47 2321 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 RGPD1P0DJD0 1748 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 SPHKAPQ2M3C7 1700 aa2.37□□□□□ -2.03
SCN3A-207ENST00000471697 XRN1Q8IZH2 1706 aaKnown RBP2.37□□□□□ -2.03
SCN3A-207ENST00000471697 ARHGEF28Q8N1W1 1705 aaKnown RBP2.37□□□□□ -2.03
SCN3A-207ENST00000471697 MAST1Q9Y2H9 1570 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 IQGAP3Q86VI3 1631 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 AFDNP55196 1824 aaKnown RBP2.36□□□□□ -2.03
SCN3A-207ENST00000471697 IGHV1-45A0A0A0MS14 117 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 IGKV1-6A0A0C4DH72 117 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 MUC21A0A0G2JKD1 596 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 TRBV7-7A0A0K0K1E9 115 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 MUC21A0A140T8X8 626 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 PGLYRP1O75594 196 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms