RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 IGLV2-11P01706 119 aa13.15□□□□□ -0.31
SMARCD3-206ENST00000470588 IGHG2P01859 326 aa13.15□□□□□ -0.31
SMARCD3-206ENST00000470588 MT-ND6P03923 174 aa13.15□□□□□ -0.31
SMARCD3-206ENST00000470588 PRR27Q6MZM9 219 aa13.15□□□□□ -0.31
SMARCD3-206ENST00000470588 CLEC19AQ6UXS0 136 aa13.15□□□□□ -0.31
SMARCD3-206ENST00000470588 TMEM75Q8N9X5 138 aa13.15□□□□□ -0.31
SMARCD3-206ENST00000470588 CCDC140Q96MF4 163 aa13.15□□□□□ -0.31
SMARCD3-206ENST00000470588 FOXC2Q99958 501 aa13.15□□□□□ -0.31
SMARCD3-206ENST00000470588 PRSS22Q9GZN4 317 aa13.15□□□□□ -0.31
SMARCD3-206ENST00000470588 MRPL18Q9H0U6 180 aaKnown RBP13.15□□□□□ -0.31
SMARCD3-206ENST00000470588 ZFP30Q9Y2G7 519 aa13.15□□□□□ -0.31
SMARCD3-206ENST00000470588 C19orf71A6NCJ1 209 aa13.14□□□□□ -0.31
SMARCD3-206ENST00000470588 CBLN1P23435 193 aa13.14□□□□□ -0.31
SMARCD3-206ENST00000470588 LY6EQ16553 131 aa13.14□□□□□ -0.31
SMARCD3-206ENST00000470588 C9orf152Q5JTZ5 239 aa13.14□□□□□ -0.31
SMARCD3-206ENST00000470588 Q86TA4 180 aa13.14□□□□□ -0.31
SMARCD3-206ENST00000470588 TEX29Q8N6K0 151 aa13.14□□□□□ -0.31
SMARCD3-206ENST00000470588 TSKUQ8WUA8 353 aa13.14□□□□□ -0.31
SMARCD3-206ENST00000470588 DAZAP1Q96EP5 407 aaKnown RBP13.14□□□□□ -0.31
SMARCD3-206ENST00000470588 SERTM2A0A1B0GWG4 89 aa13.13□□□□□ -0.31
SMARCD3-206ENST00000470588 DIRC3C9JPN6 131 aa13.13□□□□□ -0.31
SMARCD3-206ENST00000470588 H3BUA1 57 aa13.13□□□□□ -0.31
SMARCD3-206ENST00000470588 ZNF253O75346 499 aa13.13□□□□□ -0.31
SMARCD3-206ENST00000470588 TCL1AP56279 114 aa13.13□□□□□ -0.31
SMARCD3-206ENST00000470588 PDZD11Q5EBL8 140 aa13.13□□□□□ -0.31
SMARCD3-206ENST00000470588 CT83Q5H943 113 aa13.13□□□□□ -0.31
SMARCD3-206ENST00000470588 RASL11AQ6T310 242 aa13.13□□□□□ -0.31
SMARCD3-206ENST00000470588 OR10D4PQ8NGN7 298 aa13.13□□□□□ -0.31
SMARCD3-206ENST00000470588 ZFAND3Q9H8U3 227 aa13.13□□□□□ -0.31
SMARCD3-206ENST00000470588 ASH1LQ9NR48 2969 aaKnown RBP13.13□□□□□ -0.31
SMARCD3-206ENST00000470588 CSN1S1P47710 185 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 RELQ04864 619 aaPredicted RBP13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 PRNTQ86SH4 94 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 WFDC11Q8NEX6 87 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 NAT8BQ9UHF3 227 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 APCP25054 2843 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 A8MWL6 223 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 SNURFLB1AK76 121 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 FABP4P15090 132 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 PSG3Q16557 428 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 TMEM136Q6ZRR5 245 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 HIST1H2BLQ99880 126 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 RPP21Q9H633 154 aaKnown RBP13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 GNB4Q9HAV0 340 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 ZNF331Q9NQX6 463 aaPredicted RBP13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 PSG8Q9UQ74 426 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 SMAD5-AS1Q9Y6J3 95 aa13.12□□□□□ -0.31
SMARCD3-206ENST00000470588 SPINK4O60575 86 aa13.11□□□□□ -0.31
SMARCD3-206ENST00000470588 CA1P00915 261 aaPredicted RBP13.11□□□□□ -0.31
SMARCD3-206ENST00000470588 P01737 135 aa13.11□□□□□ -0.31
SMARCD3-206ENST00000470588 TRGV3P03979 118 aa13.11□□□□□ -0.31
SMARCD3-206ENST00000470588 OR4B1Q8NGF8 309 aa13.11□□□□□ -0.31
SMARCD3-206ENST00000470588 WIPF2Q8TF74 440 aaPredicted RBP13.11□□□□□ -0.31
SMARCD3-206ENST00000470588 TRAV8-1A0A0A6YYK1 113 aa13.1□□□□□ -0.31
SMARCD3-206ENST00000470588 FRMD6-AS1P0C7T7 363 aa13.1□□□□□ -0.31
SMARCD3-206ENST00000470588 PPIFP30405 207 aaKnown RBP13.1□□□□□ -0.31
SMARCD3-206ENST00000470588 C1orf194Q5T5A4 169 aa13.1□□□□□ -0.31
SMARCD3-206ENST00000470588 LINC00322Q6ZN03 302 aaPredicted RBP13.1□□□□□ -0.31
SMARCD3-206ENST00000470588 NUP35Q8NFH5 326 aa13.1□□□□□ -0.31
SMARCD3-206ENST00000470588 USMG5Q96IX5 58 aa13.1□□□□□ -0.31
SMARCD3-206ENST00000470588 PRRC2AP48634 2157 aaKnown RBP13.1□□□□□ -0.31
SMARCD3-206ENST00000470588 IGHV3-35A0A0C4DH35 117 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 FBLL1A6NHQ2 334 aaKnown RBP13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 BUB3O43684 328 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 HLA-DQA1P01909 254 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 GFRA4Q9GZZ7 299 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 NIT2Q9NQR4 276 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 LINC00527Q9UJ94 153 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 A0A087X0K7 114 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 FAM231BA6NCW3 169 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 NPIPB6E9PJ23 425 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 SMAD7O15105 426 aaKnown RBP13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 FSHBP01225 129 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 AMBPP02760 352 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 SLC35B1P78383 322 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 DEFB112Q30KQ8 113 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 MRPL54Q6P161 138 aaKnown RBP13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 C9orf139Q6ZV77 190 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 CIARTQ8N365 385 aaPredicted RBP13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 PACRGQ96M98 296 aaPredicted RBP13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 NEU1Q99519 415 aa13.09□□□□□ -0.31
SMARCD3-206ENST00000470588 CLPSL1A2RUU4 121 aa13.08□□□□□ -0.32
SMARCD3-206ENST00000470588 PCP4L1A6NKN8 68 aa13.08□□□□□ -0.32
SMARCD3-206ENST00000470588 ZNF785A8K8V0 405 aa13.08□□□□□ -0.32
SMARCD3-206ENST00000470588 M0R3E3 92 aa13.08□□□□□ -0.32
SMARCD3-206ENST00000470588 CRISP2P16562 243 aa13.08□□□□□ -0.32
SMARCD3-206ENST00000470588 S100A12P80511 92 aa13.08□□□□□ -0.32
SMARCD3-206ENST00000470588 ATP5L2Q7Z4Y8 100 aa13.08□□□□□ -0.32
SMARCD3-206ENST00000470588 GBGT1Q8N5D6 347 aa13.08□□□□□ -0.32
SMARCD3-206ENST00000470588 OR5R1Q8NH85 324 aa13.08□□□□□ -0.32
SMARCD3-206ENST00000470588 METTL26Q96S19 204 aa13.08□□□□□ -0.32
SMARCD3-206ENST00000470588 U3KQE9 123 aa13.08□□□□□ -0.32
SMARCD3-206ENST00000470588 TPPP2P59282 170 aa13.07□□□□□ -0.32
SMARCD3-206ENST00000470588 BLCAPP62952 87 aa13.07□□□□□ -0.32
SMARCD3-206ENST00000470588 Q0VG73 95 aa13.07□□□□□ -0.32
SMARCD3-206ENST00000470588 PYY3Q5JQD4 70 aa13.07□□□□□ -0.32
SMARCD3-206ENST00000470588 DNLZQ5SXM8 178 aa13.07□□□□□ -0.32
SMARCD3-206ENST00000470588 C16orf54Q6UWD8 224 aa13.07□□□□□ -0.32
SMARCD3-206ENST00000470588 TMEM18Q96B42 140 aa13.07□□□□□ -0.32
SMARCD3-206ENST00000470588 ZNF580Q9UK33 172 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms