RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 KLF7O75840 302 aaPredicted RBP2.47□□□□□ -2.01
COL11A1-208ENST00000470170 NPYP01303 97 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 HBDP02042 147 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 RBP4P02753 201 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 IGKV4-1P06312 121 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 CD2P06729 351 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 TRGC1P0CF51 173 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 CGB3P0DN86 165 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 CGB7P0DN87 165 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 CCL3P10147 92 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 TGFBR1P36897 503 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 ZNF90Q03938 601 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 MIAQ16674 131 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 Q56UQ5 140 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 MRPL54Q6P161 138 aaKnown RBP2.47□□□□□ -2.01
COL11A1-208ENST00000470170 DPPA3Q6W0C5 159 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 AAED1Q7RTV5 226 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 MIR7-3HGQ8N6C7 128 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 PLPP5Q8NEB5 264 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 RBPMSQ93062 196 aaKnown RBP2.47□□□□□ -2.01
COL11A1-208ENST00000470170 RBMXL1Q96E39 390 aaKnown RBP2.47□□□□□ -2.01
COL11A1-208ENST00000470170 NOP16Q9Y3C1 178 aaKnown RBP2.47□□□□□ -2.01
COL11A1-208ENST00000470170 BLMP54132 1417 aaPredicted RBP2.47□□□□□ -2.01
COL11A1-208ENST00000470170 MYOM3Q5VTT5 1437 aa2.47□□□□□ -2.01
COL11A1-208ENST00000470170 KTN1Q86UP2 1357 aaKnown RBP2.47□□□□□ -2.01
COL11A1-208ENST00000470170 GPATCH8Q9UKJ3 1502 aaKnown RBP2.47□□□□□ -2.01
COL11A1-208ENST00000470170 FANCAO15360 1455 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 CDK5RAP2Q96SN8 1893 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 PHLPP1O60346 1717 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 TRBV20-1A0A075B6N2 111 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 OR51F1A6NGY5 319 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 A8MWP4 228 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 APOC4-APOC2K7ER74 178 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 SYNGR2O43760 224 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 CREBL2O60519 120 aaPredicted RBP2.46□□□□□ -2.02
COL11A1-208ENST00000470170 MPC2O95563 127 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 APOC2P02655 101 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 TRGV3P03979 118 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 IGKV1-16P04430 117 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 TPT1P13693 172 aaKnown RBP2.46□□□□□ -2.02
COL11A1-208ENST00000470170 NFYAP23511 347 aaPredicted RBP2.46□□□□□ -2.02
COL11A1-208ENST00000470170 C7orf65Q6ZTY9 151 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 LYZL2Q7Z4W2 148 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 C10orf111Q8N326 155 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 SIGLECL1Q8N7X8 197 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 WFDC11Q8NEX6 87 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 CIRBP-AS1Q8TBR5 109 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 SMCR5Q8TEV8 140 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 DIRC1Q969H9 104 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 RAB37Q96AX2 223 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 TTTY13Q9BZ97 58 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 FKBP11Q9NYL4 201 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 AP4S1Q9Y587 144 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 CHCHD2Q9Y6H1 151 aaPredicted RBP2.46□□□□□ -2.02
COL11A1-208ENST00000470170 PPRC1Q5VV67 1664 aaKnown RBP2.46□□□□□ -2.02
COL11A1-208ENST00000470170 ZFYVE16Q7Z3T8 1539 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 UBR2Q8IWV8 1755 aa2.46□□□□□ -2.02
COL11A1-208ENST00000470170 A2ML1A8K2U0 1454 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 NWD1Q149M9 1564 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 COL5A1P20908 1838 aaPredicted RBP2.45□□□□□ -2.02
COL11A1-208ENST00000470170 FOCADQ5VW36 1801 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 CEP162Q5TB80 1403 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 IGHV3-73A0A0B4J1V6 119 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 A0A0J9YW62 118 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 TCRBV3S1A0A5B6 114 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 H3BMM0 161 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 C3orf84H3BNL1 204 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 K7ERJ3 54 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 GEMIN2O14893 280 aaKnown RBP2.45□□□□□ -2.02
COL11A1-208ENST00000470170 LY6HO94772 140 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 IGKV1D-33P01593 117 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 IGKV1-33P01594 117 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 LINC00032P0C843 101 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 ZNF705BP0CI00 300 aaPredicted RBP2.45□□□□□ -2.02
COL11A1-208ENST00000470170 RNASE2P10153 161 aaKnown RBP2.45□□□□□ -2.02
COL11A1-208ENST00000470170 MPV17P39210 176 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 SNRPD3P62318 126 aaKnown RBP2.45□□□□□ -2.02
COL11A1-208ENST00000470170 UBA52P62987 128 aaKnown RBP2.45□□□□□ -2.02
COL11A1-208ENST00000470170 ZNF846Q147U1 533 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 C6orf52Q5T4I8 152 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 FOXI2Q6ZQN5 318 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 CLDND2Q8NHS1 167 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 LCN9Q8WX39 176 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 UBE2WQ96B02 151 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 UPK3BQ9BT76 320 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 SEC11CQ9BY50 192 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 DPY30Q9C005 99 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 AGPAT4-IT1Q9H0P7 198 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 SLC35B3Q9H1N7 401 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 SMDT1Q9H4I9 107 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 ZNF355PQ9NSJ1 428 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 NHP2Q9NX24 153 aaKnown RBP2.45□□□□□ -2.02
COL11A1-208ENST00000470170 DNAJC15Q9Y5T4 150 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 HSPE1-MOB4S4R3N1 261 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 MYH11P35749 1972 aa2.45□□□□□ -2.02
COL11A1-208ENST00000470170 PLXND1Q9Y4D7 1925 aa2.44□□□□□ -2.02
COL11A1-208ENST00000470170 TROQ12816 1431 aaPredicted RBP2.44□□□□□ -2.02
COL11A1-208ENST00000470170 ERICH3Q5RHP9 1530 aa2.44□□□□□ -2.02
COL11A1-208ENST00000470170 H3BT86 120 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms