RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 GCSHP23434 173 aa12.69□□□□□ -0.38
LINC00888-201ENST00000468380 Q6ZSN1 163 aa12.69□□□□□ -0.38
LINC00888-201ENST00000468380 TMED4Q7Z7H5 227 aa12.69□□□□□ -0.38
LINC00888-201ENST00000468380 OR51S1Q8NGJ8 323 aa12.69□□□□□ -0.38
LINC00888-201ENST00000468380 RPUSD4Q96CM3 377 aaKnown RBP12.69□□□□□ -0.38
LINC00888-201ENST00000468380 ATP6V1G2O95670 118 aa12.68□□□□□ -0.38
LINC00888-201ENST00000468380 RPL7P18124 248 aaKnown RBP12.68□□□□□ -0.38
LINC00888-201ENST00000468380 GFI1BQ5VTD9 330 aa12.68□□□□□ -0.38
LINC00888-201ENST00000468380 CCDC28AQ8IWP9 274 aa12.68□□□□□ -0.38
LINC00888-201ENST00000468380 C20orf144Q9BQM9 153 aa12.68□□□□□ -0.38
LINC00888-201ENST00000468380 A0A087X0K7 114 aa12.67□□□□□ -0.38
LINC00888-201ENST00000468380 AKR1C4P17516 323 aa12.67□□□□□ -0.38
LINC00888-201ENST00000468380 SSBP1Q04837 148 aaKnown RBP12.67□□□□□ -0.38
LINC00888-201ENST00000468380 MIXL1Q9H2W2 232 aa12.67□□□□□ -0.38
LINC00888-201ENST00000468380 SNURFLB1AK76 121 aa12.66□□□□□ -0.38
LINC00888-201ENST00000468380 C15orf40Q8WUR7 153 aa12.66□□□□□ -0.38
LINC00888-201ENST00000468380 HIGD1AQ9Y241 93 aa12.66□□□□□ -0.38
LINC00888-201ENST00000468380 HMCN2Q8NDA2 5059 aa12.65□□□□□ -0.38
LINC00888-201ENST00000468380 DNAH8Q96JB1 4490 aa12.65□□□□□ -0.38
LINC00888-201ENST00000468380 PRAC2D3DTV9 90 aa12.65□□□□□ -0.38
LINC00888-201ENST00000468380 MRPS12O15235 138 aaKnown RBP12.65□□□□□ -0.38
LINC00888-201ENST00000468380 SNRPCP09234 159 aaKnown RBP12.65□□□□□ -0.38
LINC00888-201ENST00000468380 AKAIN1P0CW23 69 aa12.65□□□□□ -0.38
LINC00888-201ENST00000468380 S100A7P31151 101 aa12.65□□□□□ -0.38
LINC00888-201ENST00000468380 DAZ2Q13117 558 aaKnown RBP12.65□□□□□ -0.38
LINC00888-201ENST00000468380 PRRT1Q99946 306 aa12.65□□□□□ -0.38
LINC00888-201ENST00000468380 HYPMO75409 117 aa12.64□□□□□ -0.39
LINC00888-201ENST00000468380 RAP2BP61225 183 aa12.64□□□□□ -0.39
LINC00888-201ENST00000468380 AKR1C1Q04828 323 aa12.64□□□□□ -0.39
LINC00888-201ENST00000468380 PATE2Q6UY27 113 aa12.64□□□□□ -0.39
LINC00888-201ENST00000468380 CYP2G1PQ6ZSU1 146 aa12.64□□□□□ -0.39
LINC00888-201ENST00000468380 NFE4Q86UQ8 179 aa12.64□□□□□ -0.39
LINC00888-201ENST00000468380 CLVS1Q8IUQ0 354 aaPredicted RBP12.64□□□□□ -0.39
LINC00888-201ENST00000468380 LRRC20Q8TCA0 184 aa12.64□□□□□ -0.39
LINC00888-201ENST00000468380 PMS2P5A8MQ11 134 aa12.63□□□□□ -0.39
LINC00888-201ENST00000468380 J3KRW8 73 aa12.63□□□□□ -0.39
LINC00888-201ENST00000468380 WRBO00258 174 aa12.63□□□□□ -0.39
LINC00888-201ENST00000468380 IL5P05113 134 aa12.63□□□□□ -0.39
LINC00888-201ENST00000468380 PLP1P60201 277 aa12.63□□□□□ -0.39
LINC00888-201ENST00000468380 ACOT7LQ6ZUV0 252 aa12.63□□□□□ -0.39
LINC00888-201ENST00000468380 ZBTB8BQ8NAP8 495 aaPredicted RBP12.63□□□□□ -0.39
LINC00888-201ENST00000468380 SMIM4Q8WVI0 70 aa12.63□□□□□ -0.39
LINC00888-201ENST00000468380 NAA50Q9GZZ1 169 aaKnown RBP12.63□□□□□ -0.39
LINC00888-201ENST00000468380 ZNF331Q9NQX6 463 aaPredicted RBP12.63□□□□□ -0.39
LINC00888-201ENST00000468380 A0A087WXM4 84 aa12.62□□□□□ -0.39
LINC00888-201ENST00000468380 TRAV12-3A0A0B4J271 114 aa12.62□□□□□ -0.39
LINC00888-201ENST00000468380 LINC00854A0A1B0GVQ3 168 aa12.62□□□□□ -0.39
LINC00888-201ENST00000468380 KRTAP29-1A8MX34 341 aaPredicted RBP12.62□□□□□ -0.39
LINC00888-201ENST00000468380 OR5G3P0C626 314 aa12.62□□□□□ -0.39
LINC00888-201ENST00000468380 SPANXN5Q5MJ07 72 aa12.62□□□□□ -0.39
LINC00888-201ENST00000468380 LYPD5Q6UWN5 251 aa12.62□□□□□ -0.39
LINC00888-201ENST00000468380 CCDC190Q86UF4 302 aa12.62□□□□□ -0.39
LINC00888-201ENST00000468380 AP3S1Q92572 193 aa12.62□□□□□ -0.39
LINC00888-201ENST00000468380 VCX3AQ9NNX9 186 aa12.62□□□□□ -0.39
LINC00888-201ENST00000468380 GSN-AS1Q9NRJ2 163 aa12.62□□□□□ -0.39
LINC00888-201ENST00000468380 TRGV2A0A075B6R0 118 aa12.61□□□□□ -0.39
LINC00888-201ENST00000468380 SYNGR2O43760 224 aa12.61□□□□□ -0.39
LINC00888-201ENST00000468380 ZNF324O75467 553 aaPredicted RBP12.61□□□□□ -0.39
LINC00888-201ENST00000468380 LINC00869P0C866 280 aa12.61□□□□□ -0.39
LINC00888-201ENST00000468380 CT45A10P0DMU9 189 aa12.61□□□□□ -0.39
LINC00888-201ENST00000468380 C11orf72Q8NBR9 251 aa12.61□□□□□ -0.39
LINC00888-201ENST00000468380 ZNF431Q8TF32 576 aaPredicted RBP12.61□□□□□ -0.39
LINC00888-201ENST00000468380 FAM30AQ9NZY2 134 aa12.61□□□□□ -0.39
LINC00888-201ENST00000468380 LRP1Q07954 4544 aaKnown RBP12.6□□□□□ -0.39
LINC00888-201ENST00000468380 H3BP45 60 aa12.6□□□□□ -0.39
LINC00888-201ENST00000468380 CTDSP2O14595 271 aa12.6□□□□□ -0.39
LINC00888-201ENST00000468380 PAX4O43316 350 aa12.6□□□□□ -0.39
LINC00888-201ENST00000468380 MED6O75586 246 aa12.6□□□□□ -0.39
LINC00888-201ENST00000468380 RPP30P78346 268 aaKnown RBP12.6□□□□□ -0.39
LINC00888-201ENST00000468380 SRPXP78539 464 aa12.6□□□□□ -0.39
LINC00888-201ENST00000468380 MRPS10P82664 201 aaKnown RBP12.6□□□□□ -0.39
LINC00888-201ENST00000468380 CTF1Q16619 201 aa12.6□□□□□ -0.39
LINC00888-201ENST00000468380 CIB3Q96Q77 187 aaPredicted RBP12.6□□□□□ -0.39
LINC00888-201ENST00000468380 TMEM70Q9BUB7 260 aa12.6□□□□□ -0.39
LINC00888-201ENST00000468380 MSRB1Q9NZV6 116 aa12.6□□□□□ -0.39
LINC00888-201ENST00000468380 ICOSQ9Y6W8 199 aa12.6□□□□□ -0.39
LINC00888-201ENST00000468380 ANKRD20A5PA0PJZ0 165 aa12.59□□□□□ -0.39
LINC00888-201ENST00000468380 H3BTX0 84 aa12.59□□□□□ -0.39
LINC00888-201ENST00000468380 SLC17A3O00476 420 aa12.59□□□□□ -0.39
LINC00888-201ENST00000468380 SLC25A6P12236 298 aa12.59□□□□□ -0.39
LINC00888-201ENST00000468380 ANXA3P12429 323 aa12.59□□□□□ -0.39
LINC00888-201ENST00000468380 ANXA7P20073 488 aaKnown RBP12.59□□□□□ -0.39
LINC00888-201ENST00000468380 SCGB3A2Q96PL1 93 aa12.59□□□□□ -0.39
LINC00888-201ENST00000468380 PYGO2Q9BRQ0 406 aa12.59□□□□□ -0.39
LINC00888-201ENST00000468380 FUT9Q9Y231 359 aa12.59□□□□□ -0.39
LINC00888-201ENST00000468380 TRGV1A0A0A0MS02 117 aa12.58□□□□□ -0.4
LINC00888-201ENST00000468380 DUXBA0A1W2PPF3 345 aa12.58□□□□□ -0.4
LINC00888-201ENST00000468380 SMCO3A2RU48 225 aa12.58□□□□□ -0.4
LINC00888-201ENST00000468380 ARL6Q9H0F7 186 aa12.58□□□□□ -0.4
LINC00888-201ENST00000468380 SCP2D1Q9UJQ7 156 aa12.58□□□□□ -0.4
LINC00888-201ENST00000468380 KLF12Q9Y4X4 402 aa12.58□□□□□ -0.4
LINC00888-201ENST00000468380 TRAV9-2A0A087WT02 112 aa12.57□□□□□ -0.4
LINC00888-201ENST00000468380 CTDSPLO15194 276 aa12.57□□□□□ -0.4
LINC00888-201ENST00000468380 IGHV3-53P01767 116 aa12.57□□□□□ -0.4
LINC00888-201ENST00000468380 CXCL2P19875 107 aa12.57□□□□□ -0.4
LINC00888-201ENST00000468380 TEPPQ6URK8 271 aa12.57□□□□□ -0.4
LINC00888-201ENST00000468380 LCN15Q6UWW0 184 aa12.57□□□□□ -0.4
LINC00888-201ENST00000468380 LINC00467Q9BRT7 94 aa12.57□□□□□ -0.4
LINC00888-201ENST00000468380 ARV1Q9H2C2 271 aa12.57□□□□□ -0.4
LINC00888-201ENST00000468380 STRAPQ9Y3F4 350 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms