RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 IFNA14P01570 189 aa0.49□□□□□ -2.33
LRCH3-211ENST00000466054 IFNA4P05014 189 aa0.49□□□□□ -2.33
LRCH3-211ENST00000466054 S100A7AQ86SG5 101 aa0.49□□□□□ -2.33
LRCH3-211ENST00000466054 CEP19Q96LK0 163 aa0.49□□□□□ -2.33
LRCH3-211ENST00000466054 SH3BGRL3Q9H299 93 aa0.49□□□□□ -2.33
LRCH3-211ENST00000466054 LYRM2Q9NU23 88 aaPredicted RBP0.49□□□□□ -2.33
LRCH3-211ENST00000466054 MGAMO43451 1857 aa0.49□□□□□ -2.33
LRCH3-211ENST00000466054 COL24A1Q17RW2 1714 aa0.49□□□□□ -2.33
LRCH3-211ENST00000466054 PPYP01298 95 aa0.48□□□□□ -2.33
LRCH3-211ENST00000466054 APOA2P02652 100 aa0.48□□□□□ -2.33
LRCH3-211ENST00000466054 PHBP35232 272 aa0.48□□□□□ -2.33
LRCH3-211ENST00000466054 GNG5P63218 68 aa0.48□□□□□ -2.33
LRCH3-211ENST00000466054 KLRD1Q13241 179 aa0.48□□□□□ -2.33
LRCH3-211ENST00000466054 TMEM14EPQ6UXP3 125 aa0.48□□□□□ -2.33
LRCH3-211ENST00000466054 PPTC7Q8NI37 304 aa0.48□□□□□ -2.33
LRCH3-211ENST00000466054 ZHX1-C8orf76Q96EF9 292 aa0.48□□□□□ -2.33
LRCH3-211ENST00000466054 WFDC10AQ9H1F0 79 aa0.48□□□□□ -2.33
LRCH3-211ENST00000466054 TCEAL2Q9H3H9 227 aaPredicted RBP0.48□□□□□ -2.33
LRCH3-211ENST00000466054 SSR3Q9UNL2 185 aa0.48□□□□□ -2.33
LRCH3-211ENST00000466054 NISCHQ9Y2I1 1504 aa0.48□□□□□ -2.33
LRCH3-211ENST00000466054 hDV103S1A0JD37 113 aa0.47□□□□□ -2.33
LRCH3-211ENST00000466054 RIIAD1A6NNX1 92 aa0.47□□□□□ -2.33
LRCH3-211ENST00000466054 ATP5HO75947 161 aa0.47□□□□□ -2.33
LRCH3-211ENST00000466054 TRGC2P03986 189 aa0.47□□□□□ -2.33
LRCH3-211ENST00000466054 OGNP20774 298 aaKnown RBP0.47□□□□□ -2.33
LRCH3-211ENST00000466054 INSL3P51460 131 aa0.47□□□□□ -2.33
LRCH3-211ENST00000466054 TMBIM6P55061 237 aa0.47□□□□□ -2.33
LRCH3-211ENST00000466054 FOXA3P55318 350 aaPredicted RBP0.47□□□□□ -2.33
LRCH3-211ENST00000466054 ARPP19P56211 112 aa0.47□□□□□ -2.33
LRCH3-211ENST00000466054 GLIPR1L1Q6UWM5 242 aa0.47□□□□□ -2.33
LRCH3-211ENST00000466054 LRRC18Q8N456 261 aa0.47□□□□□ -2.33
LRCH3-211ENST00000466054 GPX7Q96SL4 187 aaPredicted RBP0.47□□□□□ -2.33
LRCH3-211ENST00000466054 MAP1LC3BQ9GZQ8 125 aa0.47□□□□□ -2.33
LRCH3-211ENST00000466054 NIT2Q9NQR4 276 aa0.47□□□□□ -2.33
LRCH3-211ENST00000466054 TET1Q8NFU7 2136 aa0.47□□□□□ -2.33
LRCH3-211ENST00000466054 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
LRCH3-211ENST00000466054 MRPS15P82914 257 aaKnown RBP0.46□□□□□ -2.34
LRCH3-211ENST00000466054 ATOH7Q8N100 152 aa0.46□□□□□ -2.34
LRCH3-211ENST00000466054 MALSU1Q96EH3 234 aa0.46□□□□□ -2.34
LRCH3-211ENST00000466054 PAIP2Q9BPZ3 127 aaKnown RBP0.46□□□□□ -2.34
LRCH3-211ENST00000466054 FANCMQ8IYD8 2048 aa0.46□□□□□ -2.34
LRCH3-211ENST00000466054 ERBINQ96RT1 1412 aa0.46□□□□□ -2.34
LRCH3-211ENST00000466054 AHNAKQ09666 5890 aaKnown RBP0.46□□□□□ -2.34
LRCH3-211ENST00000466054 A0A0D9SG42 100 aa0.45□□□□□ -2.34
LRCH3-211ENST00000466054 RER1O15258 196 aa0.45□□□□□ -2.34
LRCH3-211ENST00000466054 LYRM1O43325 122 aa0.45□□□□□ -2.34
LRCH3-211ENST00000466054 HIST1H2BKO60814 126 aa0.45□□□□□ -2.34
LRCH3-211ENST00000466054 HIST1H2BJP06899 126 aa0.45□□□□□ -2.34
LRCH3-211ENST00000466054 CXCL1P09341 107 aa0.45□□□□□ -2.34
LRCH3-211ENST00000466054 HACD4Q5VWC8 232 aa0.45□□□□□ -2.34
LRCH3-211ENST00000466054 NUP35Q8NFH5 326 aa0.45□□□□□ -2.34
LRCH3-211ENST00000466054 PBDC1Q9BVG4 233 aa0.45□□□□□ -2.34
LRCH3-211ENST00000466054 RNF11Q9Y3C5 154 aa0.45□□□□□ -2.34
LRCH3-211ENST00000466054 CAMSAP2Q08AD1 1489 aa0.45□□□□□ -2.34
LRCH3-211ENST00000466054 KCPQ6ZWJ8 1503 aa0.44□□□□□ -2.34
LRCH3-211ENST00000466054 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
LRCH3-211ENST00000466054 IFNA1P01562 189 aa0.44□□□□□ -2.34
LRCH3-211ENST00000466054 CIRBPQ14011 172 aaKnown RBP0.44□□□□□ -2.34
LRCH3-211ENST00000466054 ASB4Q9Y574 426 aa0.44□□□□□ -2.34
LRCH3-211ENST00000466054 MUC5BQ9HC84 5762 aaPredicted RBP0.43□□□□□ -2.34
LRCH3-211ENST00000466054 PIK3C2AO00443 1686 aa0.43□□□□□ -2.34
LRCH3-211ENST00000466054 TRAV23DV6A0A075B6W5 121 aa0.43□□□□□ -2.34
LRCH3-211ENST00000466054 IGHV3-33P01772 117 aa0.43□□□□□ -2.34
LRCH3-211ENST00000466054 PRH1P02810 166 aa0.43□□□□□ -2.34
LRCH3-211ENST00000466054 EIF3IQ13347 325 aaKnown RBP0.43□□□□□ -2.34
LRCH3-211ENST00000466054 C1orf140Q5VVS0 124 aa0.43□□□□□ -2.34
LRCH3-211ENST00000466054 PHF5AQ7RTV0 110 aaKnown RBP0.43□□□□□ -2.34
LRCH3-211ENST00000466054 OR13C6PQ8NH95 151 aa0.43□□□□□ -2.34
LRCH3-211ENST00000466054 GINS3Q9BRX5 216 aa0.43□□□□□ -2.34
LRCH3-211ENST00000466054 RTL8AQ9BWD3 113 aa0.43□□□□□ -2.34
LRCH3-211ENST00000466054 CD109Q6YHK3 1445 aa0.43□□□□□ -2.34
LRCH3-211ENST00000466054 MUC4Q99102 2169 aa0.43□□□□□ -2.34
LRCH3-211ENST00000466054 ZGRF1Q86YA3 2104 aa0.43□□□□□ -2.34
LRCH3-211ENST00000466054 ZNF462Q96JM2 2506 aa0.42□□□□□ -2.34
LRCH3-211ENST00000466054 N4BP2Q86UW6 1770 aaPredicted RBP0.42□□□□□ -2.34
LRCH3-211ENST00000466054 FRMPD1Q5SYB0 1578 aa0.42□□□□□ -2.34
LRCH3-211ENST00000466054 A0A096LPI6 279 aa0.42□□□□□ -2.34
LRCH3-211ENST00000466054 C9orf170A2RU37 121 aa0.42□□□□□ -2.34
LRCH3-211ENST00000466054 K7ERJ3 54 aa0.42□□□□□ -2.34
LRCH3-211ENST00000466054 GPR31O00270 319 aa0.42□□□□□ -2.34
LRCH3-211ENST00000466054 RPL19P84098 196 aaKnown RBP0.42□□□□□ -2.34
LRCH3-211ENST00000466054 SNCBQ16143 134 aa0.42□□□□□ -2.34
LRCH3-211ENST00000466054 Q6ZS92 163 aa0.42□□□□□ -2.34
LRCH3-211ENST00000466054 LINC00299Q6ZSB3 139 aa0.42□□□□□ -2.34
LRCH3-211ENST00000466054 SMR3AQ99954 134 aa0.42□□□□□ -2.34
LRCH3-211ENST00000466054 PLAC8Q9NZF1 115 aa0.42□□□□□ -2.34
LRCH3-211ENST00000466054 STOML2Q9UJZ1 356 aa0.42□□□□□ -2.34
LRCH3-211ENST00000466054 EIF3AQ14152 1382 aaKnown RBP0.42□□□□□ -2.34
LRCH3-211ENST00000466054 BCL9O00512 1426 aa0.41□□□□□ -2.34
LRCH3-211ENST00000466054 PTPRDP23468 1912 aa0.41□□□□□ -2.34
LRCH3-211ENST00000466054 MYH2Q9UKX2 1941 aa0.41□□□□□ -2.34
LRCH3-211ENST00000466054 TRBV30A0A0K0K1B3 111 aa0.41□□□□□ -2.34
LRCH3-211ENST00000466054 C5orf67F2Z3F1 127 aa0.41□□□□□ -2.34
LRCH3-211ENST00000466054 CD14P08571 375 aa0.41□□□□□ -2.34
LRCH3-211ENST00000466054 IDO1P14902 403 aa0.41□□□□□ -2.34
LRCH3-211ENST00000466054 PPP1R2P41236 205 aa0.41□□□□□ -2.34
LRCH3-211ENST00000466054 TMED4Q7Z7H5 227 aa0.41□□□□□ -2.34
LRCH3-211ENST00000466054 ADGBQ8N7X0 1667 aa0.4□□□□□ -2.34
LRCH3-211ENST00000466054 ODAMA1E959 279 aa0.4□□□□□ -2.35
LRCH3-211ENST00000466054 RPL35P42766 123 aaKnown RBP0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms