RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 HLA-DRB4X5D2U9 266 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 CACNA1SQ13698 1873 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 TMEM2Q9UHN6 1383 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 KDM6AO15550 1401 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-205ENST00000464541 NUP210Q8TEM1 1887 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-205ENST00000464541 ZNF638Q14966 1978 aaKnown RBP2.44□□□□□ -2.02
PTCD3-205ENST00000464541 C11orf86A6NJI1 115 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 YPEL1O60688 119 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 TIMM17BO60830 172 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 TCRAP04437 139 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 AKAIN1P0CW23 69 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 PPP3R1P63098 170 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 PLGLB1Q02325 96 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 GLIPR1L1Q6UWM5 242 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 C3orf62Q6ZUJ4 267 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 LINC00471Q8N535 108 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-205ENST00000464541 AQP3Q92482 292 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 BCL2L10Q9HD36 194 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 COA4Q9NYJ1 87 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 HHLA3Q9XRX5 114 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 LY96Q9Y6Y9 160 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 SIPA1L1O43166 1804 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 SPEF2Q9C093 1822 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 PLXND1Q9Y4D7 1925 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 UBR2Q8IWV8 1755 aa2.44□□□□□ -2.02
PTCD3-205ENST00000464541 CNTLNQ9NXG0 1405 aa2.43□□□□□ -2.02
PTCD3-205ENST00000464541 ZNF727A8MUV8 499 aa2.43□□□□□ -2.02
PTCD3-205ENST00000464541 HBDP02042 147 aa2.43□□□□□ -2.02
PTCD3-205ENST00000464541 CSRP1P21291 193 aaKnown RBP2.43□□□□□ -2.02
PTCD3-205ENST00000464541 GNG4P50150 75 aa2.43□□□□□ -2.02
PTCD3-205ENST00000464541 FOXA3P55318 350 aaPredicted RBP2.43□□□□□ -2.02
PTCD3-205ENST00000464541 MAXP61244 160 aa2.43□□□□□ -2.02
PTCD3-205ENST00000464541 IZUMO2Q6UXV1 221 aa2.43□□□□□ -2.02
PTCD3-205ENST00000464541 LYPD6Q86Y78 171 aa2.43□□□□□ -2.02
PTCD3-205ENST00000464541 C8orf59Q8N0T1 100 aaPredicted RBP2.43□□□□□ -2.02
PTCD3-205ENST00000464541 OR5D14Q8NGL3 314 aa2.43□□□□□ -2.02
PTCD3-205ENST00000464541 CHCHD1Q96BP2 118 aaKnown RBP2.43□□□□□ -2.02
PTCD3-205ENST00000464541 MRPS24Q96EL2 167 aaKnown RBP2.43□□□□□ -2.02
PTCD3-205ENST00000464541 SAR1AQ9NR31 198 aa2.43□□□□□ -2.02
PTCD3-205ENST00000464541 KDM5CP41229 1560 aa2.43□□□□□ -2.02
PTCD3-205ENST00000464541 COL18A1P39060 1754 aa2.43□□□□□ -2.02
PTCD3-205ENST00000464541 DOCK4Q8N1I0 1966 aa2.43□□□□□ -2.02
PTCD3-205ENST00000464541 GRIN2AQ12879 1464 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 TCOF1Q13428 1488 aaKnown RBP2.42□□□□□ -2.02
PTCD3-205ENST00000464541 IGHV3-64A0A075B6Q5 118 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 IGHV1-18A0A0C4DH31 117 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 A0A0G2JMM0 328 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 A0A1W2PPB8 328 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 KIR3DP1A8MWS1 328 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 C17orf112F2Z3M2 114 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 RBP4P02753 201 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 SLC25A5P05141 298 aaKnown RBP2.42□□□□□ -2.02
PTCD3-205ENST00000464541 TRGC1P0CF51 173 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 ZNF22P17026 224 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-205ENST00000464541 CDK5R1Q15078 307 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 PYDC2Q56P42 97 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 SPANXN5Q5MJ07 72 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 SCIMPQ6UWF3 145 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 LCN15Q6UWW0 184 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 TMEM91Q6ZNR0 172 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 TEN1Q86WV5 123 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 KCNRGQ8N5I3 272 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 C3orf56Q8N813 242 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 Q8NDZ9 215 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 DIRC1Q969H9 104 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 OR4C12Q96R67 309 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 TAS2R4Q9NYW5 299 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 COMMD3Q9UBI1 195 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 MINOS1-NBL1R4GNA1 71 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 PLXNB1O43157 2135 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 ECM29Q5VYK3 1845 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 PRR14LQ5THK1 2151 aa2.42□□□□□ -2.02
PTCD3-205ENST00000464541 MYH11P35749 1972 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 PNMA8CA0A1B0GUJ8 204 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 LOC107986453A0A1B0GWG9 222 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 SNAPC5O75971 98 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 PROSCO94903 275 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 CPSF4O95639 269 aaKnown RBP2.41□□□□□ -2.02
PTCD3-205ENST00000464541 SAA1P0DJI8 122 aaPredicted RBP2.41□□□□□ -2.02
PTCD3-205ENST00000464541 PYYP10082 97 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 FABP4P15090 132 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 ZNF93P35789 620 aaPredicted RBP2.41□□□□□ -2.02
PTCD3-205ENST00000464541 RELAQ04206 551 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 DIAPH2-AS1Q14236 149 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 KRTAP25-1Q3LHN0 102 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 FAM27BQ5VT28 67 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 LINC01545Q5VT33 79 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 PATE2Q6UY27 113 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 RPS19BP1Q86WX3 136 aaKnown RBP2.41□□□□□ -2.02
PTCD3-205ENST00000464541 ACBD7Q8N6N7 88 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 PP6455Q8WZ26 134 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 CST9LQ9H4G1 147 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 SCN3BQ9NY72 215 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 TPRKBQ9Y3C4 175 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 RIMBP3CA6NJZ7 1639 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 RIMBP3BA6NNM3 1639 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 RIMBP3Q9UFD9 1639 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 VPS8Q8N3P4 1428 aa2.41□□□□□ -2.02
PTCD3-205ENST00000464541 PIK3C2AO00443 1686 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms