RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ZNF860A6NHJ4 632 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 C9JQL5 133 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 CCDC179H3BU77 68 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 GABARAPH6UMI1 98 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 K7EQS6 105 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 OVOL1O14753 267 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 GEMIN2O14893 280 aaKnown RBP1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 PITX3O75364 302 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 ARL6IP5O75915 188 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 IGKV1-39P01597 117 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 MT-ND6P03923 174 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 IGKV1D-39P04432 117 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 IGLC6P0CF74 106 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 LINC00694P0DN24 101 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 FAM236CP0DP71 79 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 PIPP12273 146 aaPredicted RBP1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 CPMP14384 443 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 PPP1CCP36873 323 aaKnown RBP1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 REG1BP48304 166 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 MARCKSL1P49006 195 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 RPS11P62280 158 aaKnown RBP eCLIP1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 RPS24P62847 133 aaKnown RBP1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 Q0VG73 95 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 SP6Q3SY56 376 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 TDRG1Q3Y452 100 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 ZNF678Q5SXM1 525 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 IBA57Q5T440 356 aaKnown RBP1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 C9orf153Q5TBE3 101 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 Q6AWC8 147 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 ZNF322Q6U7Q0 402 aaPredicted RBP1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 SGPP2Q8IWX5 399 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 C1orf64Q8NEQ6 169 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 NUP35Q8NFH5 326 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 OR4X2Q8NGF9 303 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 OR10AG1Q8NH19 301 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 OR4A5Q8NH83 315 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 MAL2Q969L2 176 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 MCEEQ96PE7 176 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 EIF5A2Q9GZV4 153 aaKnown RBP1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 TMEM222Q9H0R3 208 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 GABARAPL1Q9H0R8 117 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 NAA60Q9H7X0 242 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 SND1-IT1Q9HBX3 110 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 KCNIP2Q9NS61 270 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 KLF13Q9Y2Y9 288 aaPredicted RBP1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 MPC1Q9Y5U8 109 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 SPCS1Q9Y6A9 102 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 TULP4Q9NRJ4 1543 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 RBBP6Q7Z6E9 1792 aaKnown RBP1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 RIMBP3CA6NJZ7 1639 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 RIMBP3BA6NNM3 1639 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 IQGAP3Q86VI3 1631 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 COL27A1Q8IZC6 1860 aaPredicted RBP1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 ANKRD31Q8N7Z5 1873 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 MYO3AQ8NEV4 1616 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 TRIP11Q15643 1979 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 MRC1P22897 1456 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 BRWD3Q6RI45 1802 aa1.94□□□□□ -2.1
HMGXB4-205ENST00000464480 GLI3P10071 1580 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 FRMPD1Q5SYB0 1578 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 DIP2CQ9Y2E4 1556 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 PIK3C2AO00443 1686 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 CITO14578 2027 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 C3orf85A0A1B0GTC6 90 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 APOC4-APOC2K7ER74 178 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 UQCRQO14949 82 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 YPEL1O60688 119 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 ZNF682O95780 498 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 CXorf1O96002 111 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 NAPSAO96009 420 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 SLC25A6P12236 298 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 PTHLHP12272 177 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 OPRM1P35372 400 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 PSMB3P49720 205 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 YPEL3P61236 119 aaPredicted RBP1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 PLGLB1Q02325 96 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 ZNF90Q03938 601 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 IL15RAQ13261 267 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 IHHQ14623 411 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 RRN3P1Q2M238 152 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 VMA21Q3ZAQ7 101 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 Q499Y3 187 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 PSMG4Q5JS54 123 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 BVES-AS1Q5T3Y7 98 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 HRCT1Q6UXD1 115 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 DPPA3Q6W0C5 159 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 TCF23Q7RTU1 214 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 C10orf111Q8N326 155 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 ANKRD29Q8N6D5 301 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 OR5H2Q8NGV7 314 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 OR10AC1Q8NH08 325 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 OR4K13Q8NH42 304 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 FAM57AQ8TBR7 257 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 YPEL2Q96QA6 119 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 METTL26Q96S19 204 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 RNASE7Q9H1E1 156 aaKnown RBP1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 PXDNLA1KZ92 1463 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 NCKAP5O14513 1909 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 GPR179Q6PRD1 2367 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms