RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 OR52A1Q9UKL2 312 aa0.44□□□□□ -2.34
PTPN12-210ENST00000464313 FREM3P0C091 2139 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 A0A0D9SG42 100 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 H7C1C5 153 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 AIPO00170 330 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 ATG12O94817 140 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 PHBP35232 272 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 LCN6P62502 163 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 KLRD1Q13241 179 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 EIF3IQ13347 325 aaKnown RBP0.43□□□□□ -2.34
PTPN12-210ENST00000464313 SPATA45Q537H7 98 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 AKR1C8PQ5T2L2 129 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 IFT20Q8IY31 132 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 OR10AC1Q8NH08 325 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 OR10AG1Q8NH19 301 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 PPTC7Q8NI37 304 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 PRRT1Q99946 306 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 OR2J1Q9GZK6 312 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 SS18L2Q9UHA2 77 aa0.43□□□□□ -2.34
PTPN12-210ENST00000464313 FANCMQ8IYD8 2048 aa0.42□□□□□ -2.34
PTPN12-210ENST00000464313 NUP210LQ5VU65 1888 aa0.42□□□□□ -2.34
PTPN12-210ENST00000464313 C9orf170A2RU37 121 aa0.42□□□□□ -2.34
PTPN12-210ENST00000464313 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
PTPN12-210ENST00000464313 C5orf67F2Z3F1 127 aa0.42□□□□□ -2.34
PTPN12-210ENST00000464313 RER1O15258 196 aa0.42□□□□□ -2.34
PTPN12-210ENST00000464313 TRGC2P03986 189 aa0.42□□□□□ -2.34
PTPN12-210ENST00000464313 CD14P08571 375 aa0.42□□□□□ -2.34
PTPN12-210ENST00000464313 SPINK9Q5DT21 86 aa0.42□□□□□ -2.34
PTPN12-210ENST00000464313 SSR3Q9UNL2 185 aa0.42□□□□□ -2.34
PTPN12-210ENST00000464313 CAMSAP1Q5T5Y3 1602 aa0.42□□□□□ -2.34
PTPN12-210ENST00000464313 hDV103S1A0JD37 113 aa0.41□□□□□ -2.34
PTPN12-210ENST00000464313 NUPR2A6NF83 97 aa0.41□□□□□ -2.34
PTPN12-210ENST00000464313 RIIAD1A6NNX1 92 aa0.41□□□□□ -2.34
PTPN12-210ENST00000464313 PRH1P02810 166 aa0.41□□□□□ -2.34
PTPN12-210ENST00000464313 OGNP20774 298 aaKnown RBP0.41□□□□□ -2.34
PTPN12-210ENST00000464313 SCGB2B2Q4G0G5 96 aa0.41□□□□□ -2.34
PTPN12-210ENST00000464313 LRRC18Q8N456 261 aa0.41□□□□□ -2.34
PTPN12-210ENST00000464313 COL24A1Q17RW2 1714 aa0.41□□□□□ -2.34
PTPN12-210ENST00000464313 N4BP2Q86UW6 1770 aaPredicted RBP0.4□□□□□ -2.35
PTPN12-210ENST00000464313 MUC5BQ9HC84 5762 aaPredicted RBP0.4□□□□□ -2.35
PTPN12-210ENST00000464313 K7EIL1 84 aa0.4□□□□□ -2.35
PTPN12-210ENST00000464313 PIAS1O75925 651 aa0.4□□□□□ -2.35
PTPN12-210ENST00000464313 LYRM2Q9NU23 88 aaPredicted RBP0.4□□□□□ -2.35
PTPN12-210ENST00000464313 MYLKQ15746 1914 aa0.4□□□□□ -2.35
PTPN12-210ENST00000464313 UBR2Q8IWV8 1755 aa0.4□□□□□ -2.35
PTPN12-210ENST00000464313 APCP25054 2843 aa0.39□□□□□ -2.35
PTPN12-210ENST00000464313 IFNA14P01570 189 aa0.39□□□□□ -2.35
PTPN12-210ENST00000464313 FXYD4P59646 89 aa0.39□□□□□ -2.35
PTPN12-210ENST00000464313 MRPS15P82914 257 aaKnown RBP0.39□□□□□ -2.35
PTPN12-210ENST00000464313 PBDC1Q9BVG4 233 aa0.39□□□□□ -2.35
PTPN12-210ENST00000464313 SH3BGRL3Q9H299 93 aa0.39□□□□□ -2.35
PTPN12-210ENST00000464313 NIT2Q9NQR4 276 aa0.39□□□□□ -2.35
PTPN12-210ENST00000464313 MUC4Q99102 2169 aa0.39□□□□□ -2.35
PTPN12-210ENST00000464313 MFSD11O43934 449 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 HIST1H2BKO60814 126 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 APOA2P02652 100 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 IFNA4P05014 189 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 HIST1H2BJP06899 126 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 IDO1P14902 403 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 ARF6P62330 175 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 MIR22HGQ0VDD5 57 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 SMR3AQ99954 134 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 GINS3Q9BRX5 216 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 MAP1LC3BQ9GZQ8 125 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 RNF11Q9Y3C5 154 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 UHRF1BP1Q6BDS2 1440 aa0.38□□□□□ -2.35
PTPN12-210ENST00000464313 FRAS1Q86XX4 4008 aa0.37□□□□□ -2.35
PTPN12-210ENST00000464313 ZGRF1Q86YA3 2104 aa0.37□□□□□ -2.35
PTPN12-210ENST00000464313 A0A096LPI6 279 aa0.37□□□□□ -2.35
PTPN12-210ENST00000464313 IFNA1P01562 189 aa0.37□□□□□ -2.35
PTPN12-210ENST00000464313 CSN2P05814 226 aa0.37□□□□□ -2.35
PTPN12-210ENST00000464313 PPP1R2P41236 205 aa0.37□□□□□ -2.35
PTPN12-210ENST00000464313 VBP1P61758 197 aa0.37□□□□□ -2.35
PTPN12-210ENST00000464313 CIRBPQ14011 172 aaKnown RBP0.37□□□□□ -2.35
PTPN12-210ENST00000464313 OCIAD2Q56VL3 154 aa0.37□□□□□ -2.35
PTPN12-210ENST00000464313 C1orf140Q5VVS0 124 aa0.37□□□□□ -2.35
PTPN12-210ENST00000464313 OR13C6PQ8NH95 151 aa0.37□□□□□ -2.35
PTPN12-210ENST00000464313 LIMD2Q9BT23 127 aa0.37□□□□□ -2.35
PTPN12-210ENST00000464313 TCEAL2Q9H3H9 227 aaPredicted RBP0.37□□□□□ -2.35
PTPN12-210ENST00000464313 BCL9O00512 1426 aa0.37□□□□□ -2.35
PTPN12-210ENST00000464313 TRBV30A0A0K0K1B3 111 aa0.36□□□□□ -2.35
PTPN12-210ENST00000464313 ZNF727A8MUV8 499 aa0.36□□□□□ -2.35
PTPN12-210ENST00000464313 FOXA3P55318 350 aaPredicted RBP0.36□□□□□ -2.35
PTPN12-210ENST00000464313 HBBP68871 147 aa0.36□□□□□ -2.35
PTPN12-210ENST00000464313 RPL19P84098 196 aaKnown RBP0.36□□□□□ -2.35
PTPN12-210ENST00000464313 FOXI2Q6ZQN5 318 aa0.36□□□□□ -2.35
PTPN12-210ENST00000464313 SMIM20Q8N5G0 67 aa0.36□□□□□ -2.35
PTPN12-210ENST00000464313 USP24Q9UPU5 2620 aa0.36□□□□□ -2.35
PTPN12-210ENST00000464313 ASH1LQ9NR48 2969 aaKnown RBP0.35□□□□□ -2.35
PTPN12-210ENST00000464313 TRAV5A0A0B4J249 113 aa0.35□□□□□ -2.35
PTPN12-210ENST00000464313 LYRM1O43325 122 aa0.35□□□□□ -2.35
PTPN12-210ENST00000464313 KRTAP2-3P0C7H8 128 aa0.35□□□□□ -2.35
PTPN12-210ENST00000464313 SPINT3P49223 89 aa0.35□□□□□ -2.35
PTPN12-210ENST00000464313 GNG3P63215 75 aa0.35□□□□□ -2.35
PTPN12-210ENST00000464313 BASP1P80723 227 aaKnown RBP0.35□□□□□ -2.35
PTPN12-210ENST00000464313 FKBP1CQ5VVH2 108 aa0.35□□□□□ -2.35
PTPN12-210ENST00000464313 Q86TA4 180 aa0.35□□□□□ -2.35
PTPN12-210ENST00000464313 FAM216BQ8N7L0 139 aa0.35□□□□□ -2.35
PTPN12-210ENST00000464313 MALSU1Q96EH3 234 aa0.35□□□□□ -2.35
PTPN12-210ENST00000464313 CARD19Q96LW7 228 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms