RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 PRB4P10163 310 aaPredicted RBP14.35□□□□□ -0.11
CPSF7-209ENST00000463244 PLP1P60201 277 aa14.35□□□□□ -0.11
CPSF7-209ENST00000463244 MYCBP2O75592 4640 aa14.35□□□□□ -0.11
CPSF7-209ENST00000463244 ZNF701M0R085 212 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-209ENST00000463244 VAMP1P23763 118 aa14.34□□□□□ -0.11
CPSF7-209ENST00000463244 ESRGQ1W209 222 aa14.34□□□□□ -0.11
CPSF7-209ENST00000463244 RPUSD4Q96CM3 377 aaKnown RBP14.34□□□□□ -0.11
CPSF7-209ENST00000463244 STRAPQ9Y3F4 350 aaKnown RBP14.34□□□□□ -0.11
CPSF7-209ENST00000463244 A0A0J9YY99 117 aa14.33□□□□□ -0.12
CPSF7-209ENST00000463244 SMCO3A2RU48 225 aa14.33□□□□□ -0.12
CPSF7-209ENST00000463244 LINC00869P0C866 280 aa14.33□□□□□ -0.12
CPSF7-209ENST00000463244 HOXA5P20719 270 aa14.33□□□□□ -0.12
CPSF7-209ENST00000463244 KIR3DS1Q14943 382 aa14.33□□□□□ -0.12
CPSF7-209ENST00000463244 LRRC20Q8TCA0 184 aa14.33□□□□□ -0.12
CPSF7-209ENST00000463244 SOSTQ9BQB4 213 aa14.33□□□□□ -0.12
CPSF7-209ENST00000463244 C20orf144Q9BQM9 153 aa14.33□□□□□ -0.12
CPSF7-209ENST00000463244 CCDC59Q9P031 241 aaKnown RBP14.33□□□□□ -0.12
CPSF7-209ENST00000463244 MRPS16Q9Y3D3 137 aaKnown RBP14.33□□□□□ -0.12
CPSF7-209ENST00000463244 ADAP1O75689 374 aa14.32□□□□□ -0.12
CPSF7-209ENST00000463244 OR5G3P0C626 314 aa14.32□□□□□ -0.12
CPSF7-209ENST00000463244 DYNC2LI1Q8TCX1 351 aa14.32□□□□□ -0.12
CPSF7-209ENST00000463244 H3BNG1 76 aa14.31□□□□□ -0.12
CPSF7-209ENST00000463244 MRPS12O15235 138 aaKnown RBP14.31□□□□□ -0.12
CPSF7-209ENST00000463244 HOXB5P09067 269 aa14.31□□□□□ -0.12
CPSF7-209ENST00000463244 FAUP35544 74 aaKnown RBP14.31□□□□□ -0.12
CPSF7-209ENST00000463244 SELENOTP62341 195 aa14.31□□□□□ -0.12
CPSF7-209ENST00000463244 DLK1P80370 383 aa14.31□□□□□ -0.12
CPSF7-209ENST00000463244 ZNF586Q9NXT0 402 aa14.31□□□□□ -0.12
CPSF7-209ENST00000463244 PMS2P5A8MQ11 134 aa14.3□□□□□ -0.12
CPSF7-209ENST00000463244 EPM2AB3EWF7 344 aa14.3□□□□□ -0.12
CPSF7-209ENST00000463244 SFT2D2O95562 160 aa14.3□□□□□ -0.12
CPSF7-209ENST00000463244 CXCL2P19875 107 aa14.3□□□□□ -0.12
CPSF7-209ENST00000463244 PPP1R1AQ13522 171 aa14.3□□□□□ -0.12
CPSF7-209ENST00000463244 S100A7AQ86SG5 101 aa14.3□□□□□ -0.12
CPSF7-209ENST00000463244 VPS13BQ7Z7G8 4022 aa14.29□□□□□ -0.12
CPSF7-209ENST00000463244 GAGE12BA1L429 117 aa14.29□□□□□ -0.12
CPSF7-209ENST00000463244 FABP12A6NFH5 140 aa14.29□□□□□ -0.12
CPSF7-209ENST00000463244 GAGE7O76087 117 aa14.29□□□□□ -0.12
CPSF7-209ENST00000463244 RLN2P04090 185 aa14.29□□□□□ -0.12
CPSF7-209ENST00000463244 GAGE12FP0CL80 117 aa14.29□□□□□ -0.12
CPSF7-209ENST00000463244 GAGE12GP0CL81 117 aa14.29□□□□□ -0.12
CPSF7-209ENST00000463244 GAGE12IP0CL82 117 aa14.29□□□□□ -0.12
CPSF7-209ENST00000463244 GFI1BQ5VTD9 330 aa14.29□□□□□ -0.12
CPSF7-209ENST00000463244 LCN15Q6UWW0 184 aa14.29□□□□□ -0.12
CPSF7-209ENST00000463244 PATE2Q6UY27 113 aa14.29□□□□□ -0.12
CPSF7-209ENST00000463244 CCDC28AQ8IWP9 274 aa14.29□□□□□ -0.12
CPSF7-209ENST00000463244 PARD6GQ9BYG4 376 aaPredicted RBP14.29□□□□□ -0.12
CPSF7-209ENST00000463244 ZNF331Q9NQX6 463 aaPredicted RBP14.29□□□□□ -0.12
CPSF7-209ENST00000463244 TNFSF8P32971 234 aa14.28□□□□□ -0.12
CPSF7-209ENST00000463244 LINC00315P59091 139 aa14.28□□□□□ -0.12
CPSF7-209ENST00000463244 ID3Q02535 119 aa14.28□□□□□ -0.12
CPSF7-209ENST00000463244 Q6ZRN7 208 aaPredicted RBP14.28□□□□□ -0.12
CPSF7-209ENST00000463244 TRIM63Q969Q1 353 aa14.28□□□□□ -0.12
CPSF7-209ENST00000463244 SLC25A21Q9BQT8 299 aaPredicted RBP14.28□□□□□ -0.12
CPSF7-209ENST00000463244 ARL6Q9H0F7 186 aa14.28□□□□□ -0.12
CPSF7-209ENST00000463244 ARV1Q9H2C2 271 aa14.28□□□□□ -0.12
CPSF7-209ENST00000463244 RNF24Q9Y225 148 aa14.28□□□□□ -0.12
CPSF7-209ENST00000463244 SNURFLB1AK76 121 aa14.27□□□□□ -0.13
CPSF7-209ENST00000463244 K7EPK0 472 aa14.27□□□□□ -0.13
CPSF7-209ENST00000463244 ANXA7P20073 488 aaKnown RBP14.27□□□□□ -0.13
CPSF7-209ENST00000463244 POLR2GP62487 172 aaKnown RBP eCLIP14.27□□□□□ -0.13
CPSF7-209ENST00000463244 RAB2BQ8WUD1 216 aa14.27□□□□□ -0.13
CPSF7-209ENST00000463244 SLC50A1Q9BRV3 221 aa14.27□□□□□ -0.13
CPSF7-209ENST00000463244 MRPS26Q9BYN8 205 aaKnown RBP14.27□□□□□ -0.13
CPSF7-209ENST00000463244 PSENENQ9NZ42 101 aa14.27□□□□□ -0.13
CPSF7-209ENST00000463244 AP3S2P59780 193 aa14.26□□□□□ -0.13
CPSF7-209ENST00000463244 RRAS2P62070 204 aaPredicted RBP14.26□□□□□ -0.13
CPSF7-209ENST00000463244 TOMM5Q8N4H5 51 aa14.26□□□□□ -0.13
CPSF7-209ENST00000463244 SLIRPQ9GZT3 109 aaKnown RBP14.26□□□□□ -0.13
CPSF7-209ENST00000463244 TMPRSS5Q9H3S3 457 aa14.26□□□□□ -0.13
CPSF7-209ENST00000463244 SRRM2Q9UQ35 2752 aaKnown RBP14.26□□□□□ -0.13
CPSF7-209ENST00000463244 PRAC2D3DTV9 90 aa14.25□□□□□ -0.13
CPSF7-209ENST00000463244 CCNKO75909 580 aa14.25□□□□□ -0.13
CPSF7-209ENST00000463244 SNRPCP09234 159 aaKnown RBP14.25□□□□□ -0.13
CPSF7-209ENST00000463244 NPVFQ9HCQ7 196 aa14.25□□□□□ -0.13
CPSF7-209ENST00000463244 A0A096LPF7 62 aa14.24□□□□□ -0.13
CPSF7-209ENST00000463244 FNDC10F2Z333 226 aa14.24□□□□□ -0.13
CPSF7-209ENST00000463244 SLC38A11Q08AI6 406 aa14.24□□□□□ -0.13
CPSF7-209ENST00000463244 DAZ2Q13117 558 aaKnown RBP14.24□□□□□ -0.13
CPSF7-209ENST00000463244 PXDC1Q5TGL8 231 aa14.24□□□□□ -0.13
CPSF7-209ENST00000463244 TEPPQ6URK8 271 aa14.24□□□□□ -0.13
CPSF7-209ENST00000463244 Q6ZTI0 123 aa14.24□□□□□ -0.13
CPSF7-209ENST00000463244 LINC00305Q7Z4B0 112 aa14.24□□□□□ -0.13
CPSF7-209ENST00000463244 CCDC190Q86UF4 302 aa14.24□□□□□ -0.13
CPSF7-209ENST00000463244 VSIG2Q96IQ7 327 aa14.24□□□□□ -0.13
CPSF7-209ENST00000463244 PGPEP1Q9NXJ5 209 aa14.24□□□□□ -0.13
CPSF7-209ENST00000463244 FLG2Q5D862 2391 aaPredicted RBP14.23□□□□□ -0.13
CPSF7-209ENST00000463244 SLC17A3O00476 420 aa14.23□□□□□ -0.13
CPSF7-209ENST00000463244 SSSCA1O60232 199 aa14.23□□□□□ -0.13
CPSF7-209ENST00000463244 INAFM2P0DMQ5 153 aa14.23□□□□□ -0.13
CPSF7-209ENST00000463244 TMEM14EPQ6UXP3 125 aa14.23□□□□□ -0.13
CPSF7-209ENST00000463244 LYPD1Q8N2G4 141 aa14.23□□□□□ -0.13
CPSF7-209ENST00000463244 ZBTB8BQ8NAP8 495 aaPredicted RBP14.23□□□□□ -0.13
CPSF7-209ENST00000463244 MCFD2Q8NI22 146 aa14.23□□□□□ -0.13
CPSF7-209ENST00000463244 SMIM8Q96KF7 97 aa14.23□□□□□ -0.13
CPSF7-209ENST00000463244 BCL7BQ9BQE9 202 aa14.23□□□□□ -0.13
CPSF7-209ENST00000463244 METTL15P1P0C7V9 234 aa14.22□□□□□ -0.13
CPSF7-209ENST00000463244 TMBIM6P55061 237 aa14.22□□□□□ -0.13
CPSF7-209ENST00000463244 XGP55808 180 aa14.22□□□□□ -0.13
CPSF7-209ENST00000463244 BPIFA4PQ86YQ2 179 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms