RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TIGITQ495A1 244 aa5.62□□□□□ -1.51
UBE4B-204ENST00000462658 SSX7Q7RTT5 188 aa5.62□□□□□ -1.51
UBE4B-204ENST00000462658 EIF4E3Q8N5X7 224 aaKnown RBP5.62□□□□□ -1.51
UBE4B-204ENST00000462658 COMMD1Q8N668 190 aa5.62□□□□□ -1.51
UBE4B-204ENST00000462658 OR1L4Q8NGR5 311 aa5.62□□□□□ -1.51
UBE4B-204ENST00000462658 MAP1LC3BQ9GZQ8 125 aa5.62□□□□□ -1.51
UBE4B-204ENST00000462658 SLC25A22Q9H936 323 aa5.62□□□□□ -1.51
UBE4B-204ENST00000462658 ZNF702PQ9H963 129 aa5.62□□□□□ -1.51
UBE4B-204ENST00000462658 DNAJC4Q9NNZ3 241 aa5.62□□□□□ -1.51
UBE4B-204ENST00000462658 TRBV7-1A0A0A6YYK4 115 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 OR2T8A6NH00 312 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 FAM223BA6NKX1 122 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 HMGB3O15347 200 aaKnown RBP5.61□□□□□ -1.51
UBE4B-204ENST00000462658 COX7A2P2O60397 106 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 SCGB2A1O75556 95 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 OR5G3P0C626 314 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 ORM2P19652 201 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 FGF8P55075 233 aaPredicted RBP5.61□□□□□ -1.51
UBE4B-204ENST00000462658 TPPP2P59282 170 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 YPEL3P61236 119 aaPredicted RBP5.61□□□□□ -1.51
UBE4B-204ENST00000462658 FAM78BQ5VT40 261 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 FAM223AQ8IWN6 122 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 Q8N2B8 174 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 ZNF502Q8TBZ5 544 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 ZNF418Q8TF45 676 aaPredicted RBP5.61□□□□□ -1.51
UBE4B-204ENST00000462658 GATAD1Q8WUU5 269 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 TMEM37Q8WXS4 190 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 EEF1AKMT3Q96AZ1 226 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 USMG5Q96IX5 58 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 RNF2Q99496 336 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 ESM1Q9NQ30 184 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 DOK5Q9P104 306 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 FUT9Q9Y231 359 aa5.61□□□□□ -1.51
UBE4B-204ENST00000462658 A0A087WYN8 130 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 TMEM89A2RUT3 159 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 PSMB11A5LHX3 300 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 CLDN34H7C241 214 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 NUPL2O15504 423 aaKnown RBP5.6□□□□□ -1.51
UBE4B-204ENST00000462658 HYPMO75409 117 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 IGHG4P01861 327 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 CTSGP08311 255 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 STAG3L2P0CL84 134 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 STAG3L3P0CL85 134 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 GPR183P32249 361 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 RAB9AP51151 201 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 PLP1P60201 277 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 LYZP61626 148 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 SLC35B1P78383 322 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 GUK1Q16774 197 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 C10orf113Q5VZT2 155 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 SPATA31B1PQ5VZV4 182 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 UQCC3Q6UW78 93 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 CLEC19AQ6UXS0 136 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 PATE2Q6UY27 113 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 MIR17HGQ75NE6 70 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 ZNF329Q86UD4 541 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 NFE4Q86UQ8 179 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 OR51G1Q8NGK1 321 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 OR1B1Q8NGR6 318 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 Q8WTZ3 238 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 ATP6V0BQ99437 205 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 PFDN5Q99471 154 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 PBDC1Q9BVG4 233 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 MRPL32Q9BYC8 188 aaKnown RBP5.6□□□□□ -1.51
UBE4B-204ENST00000462658 EIF5A2Q9GZV4 153 aaKnown RBP5.6□□□□□ -1.51
UBE4B-204ENST00000462658 TREM1Q9NP99 234 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 ATRQ13535 2644 aa5.6□□□□□ -1.51
UBE4B-204ENST00000462658 A0A0G2JLM5 398 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 WI2-2373I1.2A0A1W2PRP0 233 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 RBFOX3A6NFN3 312 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 I3L521 148 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 TGOLN2O43493 480 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 CXorf1O96002 111 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 CRYBA1P05813 215 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 CD5P06127 495 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 C8orf88P0DMB2 117 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 PSMB8P28062 276 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 TAS2R45P59539 299 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 HILS1P60008 231 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 PEA15Q15121 130 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 HAGHQ16775 308 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 TEX38Q6PEX7 206 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 LINC00305Q7Z4B0 112 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 ZNF491Q8N8L2 437 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 RARRES2Q99969 163 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 CHRDL1Q9BU40 450 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 SCRT1Q9BWW7 348 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 TMEM231Q9H6L2 316 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 GNB4Q9HAV0 340 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 TECRQ9NZ01 308 aaKnown RBP5.59□□□□□ -1.51
UBE4B-204ENST00000462658 GNG13Q9P2W3 67 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 HIGD1AQ9Y241 93 aa5.59□□□□□ -1.51
UBE4B-204ENST00000462658 IGLV5-45A0A087WSX0 123 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 TRAV5A0A0B4J249 113 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 IFNA1P01562 189 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 IGHV3-11P01762 117 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 IL4P05112 153 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 ARL14EPLP0DKL9 152 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 GCHFRP30047 84 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 PSMB3P49720 205 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms