RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 RTL8BQ17RB0 113 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 RRN3P1Q2M238 152 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 LINC01554Q52M75 96 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 TMEM244Q5VVB8 128 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 Q6ZQT0 140 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 TEX29Q8N6K0 151 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 NUP35Q8NFH5 326 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 PPTC7Q8NI37 304 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 SLAMF6Q96DU3 332 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 AP1S3Q96PC3 154 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 RTL8AQ9BWD3 113 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 TAS2R4Q9NYW5 299 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 NAT8BQ9UHF3 227 aa1.09□□□□□ -2.23
HDAC6-212ENST00000461608 GOLGA3Q08378 1498 aa1.09□□□□□ -2.24
HDAC6-212ENST00000461608 MAGI2Q86UL8 1455 aa1.09□□□□□ -2.24
HDAC6-212ENST00000461608 SORL1Q92673 2214 aa1.09□□□□□ -2.24
HDAC6-212ENST00000461608 DOCK5Q9H7D0 1870 aa1.09□□□□□ -2.24
HDAC6-212ENST00000461608 EFCAB5A4FU69 1503 aa1.09□□□□□ -2.24
HDAC6-212ENST00000461608 ZMYM4Q5VZL5 1548 aa1.09□□□□□ -2.24
HDAC6-212ENST00000461608 SUPT6HQ7KZ85 1726 aaKnown RBP1.09□□□□□ -2.24
HDAC6-212ENST00000461608 KIF24Q5T7B8 1368 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 IBTKQ9P2D0 1353 aaPredicted RBP1.08□□□□□ -2.24
HDAC6-212ENST00000461608 MED1Q15648 1581 aaPredicted RBP1.08□□□□□ -2.24
HDAC6-212ENST00000461608 CFAP74Q9C0B2 1584 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 SCN10AQ9Y5Y9 1956 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 BCL9O00512 1426 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 TECPR2O15040 1411 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 C3P01024 1663 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 IGKV2-40A0A087WW87 121 aaPredicted RBP1.08□□□□□ -2.24
HDAC6-212ENST00000461608 TRAV14DV4A0A0A6YYC5 116 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 A0A1B0GX51 115 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 TRDV1A0A1B0GX56 115 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 ATP6V1G2-DDX39BF2Z307 99 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 K7EP13 123 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 K7ERJ3 54 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 M0R2Z0 102 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 GNG7O60262 68 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 IGKV2D-40P01614 121 aaPredicted RBP1.08□□□□□ -2.24
HDAC6-212ENST00000461608 APOC1P02654 83 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 MPC1LP0DKB6 136 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 BCL2P10415 239 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 MIFP14174 115 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 SRP14P37108 136 aaKnown RBP1.08□□□□□ -2.24
HDAC6-212ENST00000461608 ARPP19P56211 112 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 C1orf140Q5VVS0 124 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 C4orf22Q6V702 233 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 IFT20Q8IY31 132 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 OR8I2Q8N0Y5 310 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 OR2T10Q8NGZ9 312 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 CANT1Q8WVQ1 401 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 ISOC1Q96CN7 298 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 TEX37Q96LM6 180 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 TP53RKQ96S44 253 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 SLC25A21Q9BQT8 299 aaPredicted RBP1.08□□□□□ -2.24
HDAC6-212ENST00000461608 ADAT1Q9BUB4 502 aaKnown RBP1.08□□□□□ -2.24
HDAC6-212ENST00000461608 LPAR5Q9H1C0 372 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 TPT1P8Q9HAU6 139 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 NIT2Q9NQR4 276 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 TNFSF18Q9UNG2 199 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 LAMTOR2Q9Y2Q5 125 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 SNURFQ9Y675 71 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 ZFYVE16Q7Z3T8 1539 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 ARHGEF12Q9NZN5 1544 aa1.08□□□□□ -2.24
HDAC6-212ENST00000461608 MROH2AA6NES4 1674 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 ZNF142P52746 1687 aaPredicted RBP1.07□□□□□ -2.24
HDAC6-212ENST00000461608 ATP10BO94823 1461 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 RAPGEF2Q9Y4G8 1499 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 POLR1AO95602 1720 aaPredicted RBP1.07□□□□□ -2.24
HDAC6-212ENST00000461608 CPS1P31327 1500 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 AGLP35573 1532 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 BORCS7-ASMTA0A0B4J1R7 106 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 IGKV1-9A0A0C4DH69 117 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 TLCD2A6NGC4 264 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 K7ERU9 68 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 DLEU1O43261 78 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 SULT1C4O75897 302 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 PROSCO94903 275 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 OR2H2O95918 312 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 FAM107AO95990 144 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 ANGP03950 147 aaKnown RBP1.07□□□□□ -2.24
HDAC6-212ENST00000461608 DBIP07108 87 aaKnown RBP1.07□□□□□ -2.24
HDAC6-212ENST00000461608 PAEPP09466 180 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 CRYGAP11844 174 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 ZNF25P17030 456 aaPredicted RBP1.07□□□□□ -2.24
HDAC6-212ENST00000461608 KDELR1P24390 212 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 RRAS2P62070 204 aaPredicted RBP1.07□□□□□ -2.24
HDAC6-212ENST00000461608 PLCXD2Q0VAA5 305 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 EIF3IQ13347 325 aaKnown RBP1.07□□□□□ -2.24
HDAC6-212ENST00000461608 BCL2L15Q5TBC7 163 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 Q5XG85 94 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 SOSTDC1Q6X4U4 206 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 LINC00305Q7Z4B0 112 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 TCTE3Q8IZS6 198 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 BRK1Q8WUW1 75 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 YPEL2Q96QA6 119 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 C2orf88Q9BSF0 95 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 TMEM133Q9H2Q1 129 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 LAMTOR3Q9UHA4 124 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 HS3ST2Q9Y278 367 aa1.07□□□□□ -2.24
HDAC6-212ENST00000461608 RAPGEF6Q8TEU7 1601 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms