RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 FAM213BQ8TBF2 198 aa11.64□□□□□ -0.55
SDF4-204ENST00000459994 RNF141Q8WVD5 230 aa11.64□□□□□ -0.55
SDF4-204ENST00000459994 MBD3L1Q8WWY6 194 aa11.64□□□□□ -0.55
SDF4-204ENST00000459994 GALR1P47211 349 aa11.63□□□□□ -0.55
SDF4-204ENST00000459994 FHITP49789 147 aa11.63□□□□□ -0.55
SDF4-204ENST00000459994 FAM74A1Q5RGS3 127 aa11.63□□□□□ -0.55
SDF4-204ENST00000459994 CASC10Q5T4H9 136 aa11.63□□□□□ -0.55
SDF4-204ENST00000459994 SIGLEC15Q6ZMC9 328 aa11.63□□□□□ -0.55
SDF4-204ENST00000459994 PQLC2Q6ZP29 291 aa11.63□□□□□ -0.55
SDF4-204ENST00000459994 TCF24Q7RTU0 167 aa11.63□□□□□ -0.55
SDF4-204ENST00000459994 LRRC20Q8TCA0 184 aa11.63□□□□□ -0.55
SDF4-204ENST00000459994 ZMAT4Q9H898 229 aa11.63□□□□□ -0.55
SDF4-204ENST00000459994 C3orf84H3BNL1 204 aa11.62□□□□□ -0.55
SDF4-204ENST00000459994 CD81P60033 236 aa11.62□□□□□ -0.55
SDF4-204ENST00000459994 LINC00322Q6ZN03 302 aaPredicted RBP11.62□□□□□ -0.55
SDF4-204ENST00000459994 SSX7Q7RTT5 188 aa11.62□□□□□ -0.55
SDF4-204ENST00000459994 GTSCR1Q86UQ5 136 aa11.62□□□□□ -0.55
SDF4-204ENST00000459994 DEFB125Q8N687 156 aa11.62□□□□□ -0.55
SDF4-204ENST00000459994 SAT2Q96F10 170 aaPredicted RBP11.62□□□□□ -0.55
SDF4-204ENST00000459994 LYSTQ99698 3801 aa11.62□□□□□ -0.55
SDF4-204ENST00000459994 OR51M1Q9H341 326 aa11.62□□□□□ -0.55
SDF4-204ENST00000459994 EDA2RQ9HAV5 297 aa11.62□□□□□ -0.55
SDF4-204ENST00000459994 SACSQ9NZJ4 4579 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 A0A087X0K7 114 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 TRAV1-1A0A0B4J248 108 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 MAP1LC3B2A6NCE7 125 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 RBMY1BA6NDE4 496 aaKnown RBP11.61□□□□□ -0.55
SDF4-204ENST00000459994 RBMY1EA6NEQ0 496 aaKnown RBP11.61□□□□□ -0.55
SDF4-204ENST00000459994 TSPAN4O14817 238 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 OR7C2O60412 319 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 H2AFB1P0C5Y9 115 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 RBMY1DP0C7P1 496 aaKnown RBP11.61□□□□□ -0.55
SDF4-204ENST00000459994 HIST1H1EP10412 219 aaKnown RBP11.61□□□□□ -0.55
SDF4-204ENST00000459994 MEOX2P50222 304 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 BLOC1S1P78537 153 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 IFITM2Q01629 132 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 LCN15Q6UWW0 184 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 ZNF503Q96F45 646 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 CITED4Q96RK1 184 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 PAXXQ9BUH6 204 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 MAP1LC3BQ9GZQ8 125 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 UBQLN2Q9UHD9 624 aa11.61□□□□□ -0.55
SDF4-204ENST00000459994 ZNF705EA8MWA4 302 aaPredicted RBP11.6□□□□□ -0.55
SDF4-204ENST00000459994 HMGB3O15347 200 aaKnown RBP11.6□□□□□ -0.55
SDF4-204ENST00000459994 EIF3GO75821 320 aaKnown RBP eCLIP11.6□□□□□ -0.55
SDF4-204ENST00000459994 CXorf1O96002 111 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 ARL14EPLP0DKL9 152 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 IGLC2P0DOY2 106 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 ATF4P18848 351 aaPredicted RBP11.6□□□□□ -0.55
SDF4-204ENST00000459994 GUCA2BQ16661 112 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 GUK1Q16774 197 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 ZFAND6Q6FIF0 208 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 RBPMS2Q6ZRY4 209 aaKnown RBP11.6□□□□□ -0.55
SDF4-204ENST00000459994 ZNF767PQ75MW2 155 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 TMEM61Q8N0U2 210 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 FXYD5Q96DB9 178 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 C17orf77Q96MU5 243 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 FAM110AQ9BQ89 295 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 HRH4Q9H3N8 390 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 TUBA4BQ9H853 241 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 NRN1Q9NPD7 142 aa11.6□□□□□ -0.55
SDF4-204ENST00000459994 RYR2Q92736 4967 aa11.59□□□□□ -0.55
SDF4-204ENST00000459994 TRAV2A0A0B4J234 112 aa11.59□□□□□ -0.55
SDF4-204ENST00000459994 PYYP10082 97 aa11.59□□□□□ -0.55
SDF4-204ENST00000459994 GCHFRP30047 84 aa11.59□□□□□ -0.55
SDF4-204ENST00000459994 RPL11P62913 178 aaKnown RBP11.59□□□□□ -0.55
SDF4-204ENST00000459994 PAFAH1B2P68402 229 aa11.59□□□□□ -0.55
SDF4-204ENST00000459994 SAMD13Q5VXD3 122 aa11.59□□□□□ -0.55
SDF4-204ENST00000459994 SUN5Q8TC36 379 aa11.59□□□□□ -0.55
SDF4-204ENST00000459994 SFT2D1Q8WV19 159 aa11.59□□□□□ -0.55
SDF4-204ENST00000459994 TENM2Q9NT68 2774 aa11.58□□□□□ -0.56
SDF4-204ENST00000459994 H3BQ15 152 aa11.58□□□□□ -0.56
SDF4-204ENST00000459994 TEX46H3BTG2 121 aa11.58□□□□□ -0.56
SDF4-204ENST00000459994 HBE1P02100 147 aa11.58□□□□□ -0.56
SDF4-204ENST00000459994 NBEAP1P0C6P0 100 aa11.58□□□□□ -0.56
SDF4-204ENST00000459994 UBE2L3P68036 154 aaKnown RBP11.58□□□□□ -0.56
SDF4-204ENST00000459994 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.56
SDF4-204ENST00000459994 SPATA25Q9BR10 227 aa11.58□□□□□ -0.56
SDF4-204ENST00000459994 MS4A6AQ9H2W1 248 aa11.58□□□□□ -0.56
SDF4-204ENST00000459994 SRD5A3Q9H8P0 318 aa11.58□□□□□ -0.56
SDF4-204ENST00000459994 TMEM167BQ9NRX6 74 aa11.58□□□□□ -0.56
SDF4-204ENST00000459994 ZNF586Q9NXT0 402 aa11.58□□□□□ -0.56
SDF4-204ENST00000459994 TRBV19A0A075B6N1 114 aa11.57□□□□□ -0.56
SDF4-204ENST00000459994 ZNF253O75346 499 aa11.57□□□□□ -0.56
SDF4-204ENST00000459994 OR10J4P0C629 311 aa11.57□□□□□ -0.56
SDF4-204ENST00000459994 FGF8P55075 233 aaPredicted RBP11.57□□□□□ -0.56
SDF4-204ENST00000459994 PDE6HQ13956 83 aa11.57□□□□□ -0.56
SDF4-204ENST00000459994 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.57□□□□□ -0.56
SDF4-204ENST00000459994 OR4C46A6NHA9 309 aa11.56□□□□□ -0.56
SDF4-204ENST00000459994 OR11H12B2RN74 326 aa11.56□□□□□ -0.56
SDF4-204ENST00000459994 K7EQG2 157 aa11.56□□□□□ -0.56
SDF4-204ENST00000459994 DNASE2O00115 360 aaPredicted RBP11.56□□□□□ -0.56
SDF4-204ENST00000459994 SOCS3O14543 225 aa11.56□□□□□ -0.56
SDF4-204ENST00000459994 PSMB3P49720 205 aa11.56□□□□□ -0.56
SDF4-204ENST00000459994 LYPD6BQ8NI32 183 aa11.56□□□□□ -0.56
SDF4-204ENST00000459994 DCANP1Q8TF63 244 aa11.56□□□□□ -0.56
SDF4-204ENST00000459994 IGKV3-7A0A075B6H7 116 aa11.55□□□□□ -0.56
SDF4-204ENST00000459994 NDUFB4O95168 129 aa11.55□□□□□ -0.56
SDF4-204ENST00000459994 NMBP08949 121 aa11.55□□□□□ -0.56
SDF4-204ENST00000459994 PMS2P11Q13670 270 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms