RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 PIFOQ8TCI5 191 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 TNCP24821 2201 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 IGLV2-8P01709 118 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 MYOD1P15172 320 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 LY6EQ16553 131 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 SAPCD1Q5SSQ6 148 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 MIR17HGQ75NE6 70 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 ATP5L2Q7Z4Y8 100 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 SMIM12Q96EX1 92 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 NDUFA4L2Q9NRX3 87 aa12.51□□□□□ -0.41
SNX17-204ENST00000453453 A6NDX4 124 aa12.5□□□□□ -0.41
SNX17-204ENST00000453453 CRYBB3P26998 211 aa12.5□□□□□ -0.41
SNX17-204ENST00000453453 TFPI2P48307 235 aa12.5□□□□□ -0.41
SNX17-204ENST00000453453 PTTG1IPP53801 180 aa12.5□□□□□ -0.41
SNX17-204ENST00000453453 ERHP84090 104 aaKnown RBP12.5□□□□□ -0.41
SNX17-204ENST00000453453 MRGPRG-AS1Q2M3A8 158 aa12.5□□□□□ -0.41
SNX17-204ENST00000453453 TMEM219Q86XT9 240 aa12.5□□□□□ -0.41
SNX17-204ENST00000453453 Q8N9W7 124 aa12.5□□□□□ -0.41
SNX17-204ENST00000453453 C18orf32Q8TCD1 76 aa12.5□□□□□ -0.41
SNX17-204ENST00000453453 RCHY1Q96PM5 261 aa12.5□□□□□ -0.41
SNX17-204ENST00000453453 TMUB1Q9BVT8 246 aa12.5□□□□□ -0.41
SNX17-204ENST00000453453 LY6G6DO95868 133 aa12.49□□□□□ -0.41
SNX17-204ENST00000453453 HLA-DRB1P01911 266 aa12.49□□□□□ -0.41
SNX17-204ENST00000453453 C8orf88P0DMB2 117 aa12.49□□□□□ -0.41
SNX17-204ENST00000453453 CDKN1BP46527 198 aa12.49□□□□□ -0.41
SNX17-204ENST00000453453 FXYD3Q14802 87 aa12.49□□□□□ -0.41
SNX17-204ENST00000453453 C10orf55Q5SWW7 151 aa12.49□□□□□ -0.41
SNX17-204ENST00000453453 Q6YL49 198 aa12.49□□□□□ -0.41
SNX17-204ENST00000453453 SRSF12Q8WXF0 261 aaKnown RBP12.49□□□□□ -0.41
SNX17-204ENST00000453453 GRAMD2BQ96HH9 432 aa12.49□□□□□ -0.41
SNX17-204ENST00000453453 AKAP9Q99996 3911 aa12.49□□□□□ -0.41
SNX17-204ENST00000453453 TLN2Q9Y4G6 2542 aa12.48□□□□□ -0.41
SNX17-204ENST00000453453 IGHV4-59P01825 116 aa12.48□□□□□ -0.41
SNX17-204ENST00000453453 C2orf83Q53S99 150 aa12.48□□□□□ -0.41
SNX17-204ENST00000453453 ZNF562Q6V9R5 426 aa12.48□□□□□ -0.41
SNX17-204ENST00000453453 C5orf56Q8N8D9 126 aa12.48□□□□□ -0.41
SNX17-204ENST00000453453 ARPC1AQ92747 370 aa12.48□□□□□ -0.41
SNX17-204ENST00000453453 SRSF8Q9BRL6 282 aaKnown RBP12.48□□□□□ -0.41
SNX17-204ENST00000453453 NAV3Q8IVL0 2385 aa12.48□□□□□ -0.41
SNX17-204ENST00000453453 ACANP16112 2415 aa12.48□□□□□ -0.41
SNX17-204ENST00000453453 INS-IGF2F8WCM5 200 aa12.48□□□□□ -0.41
SNX17-204ENST00000453453 FRMD6-AS1P0C7T7 363 aa12.48□□□□□ -0.41
SNX17-204ENST00000453453 SUB1P53999 127 aaKnown RBP eCLIP12.48□□□□□ -0.41
SNX17-204ENST00000453453 OR10W1Q8NGF6 305 aa12.48□□□□□ -0.41
SNX17-204ENST00000453453 RNASE7Q9H1E1 156 aaKnown RBP12.48□□□□□ -0.41
SNX17-204ENST00000453453 IGLC7A0M8Q6 106 aa12.47□□□□□ -0.41
SNX17-204ENST00000453453 GGTLC3B5MD39 225 aa12.47□□□□□ -0.41
SNX17-204ENST00000453453 UBE2G1P62253 170 aa12.47□□□□□ -0.41
SNX17-204ENST00000453453 RBX1P62877 108 aa12.47□□□□□ -0.41
SNX17-204ENST00000453453 CACNG8Q8WXS5 425 aa12.47□□□□□ -0.41
SNX17-204ENST00000453453 ZNF503Q96F45 646 aa12.47□□□□□ -0.41
SNX17-204ENST00000453453 ZNF48Q96MX3 618 aaPredicted RBP12.47□□□□□ -0.41
SNX17-204ENST00000453453 SMR3AQ99954 134 aa12.47□□□□□ -0.41
SNX17-204ENST00000453453 ST20Q9HBF5 79 aa12.47□□□□□ -0.41
SNX17-204ENST00000453453 VPREB3Q9UKI3 123 aa12.47□□□□□ -0.41
SNX17-204ENST00000453453 TRAV30A0A087WSZ9 112 aa12.46□□□□□ -0.41
SNX17-204ENST00000453453 FAM181BA6NEQ2 426 aa12.46□□□□□ -0.41
SNX17-204ENST00000453453 CCL25O15444 150 aa12.46□□□□□ -0.41
SNX17-204ENST00000453453 HSBP1O75506 76 aa12.46□□□□□ -0.41
SNX17-204ENST00000453453 TMEM190Q8WZ59 177 aa12.46□□□□□ -0.41
SNX17-204ENST00000453453 GSX1Q9H4S2 264 aaPredicted RBP12.46□□□□□ -0.41
SNX17-204ENST00000453453 PLXNB1O43157 2135 aa12.46□□□□□ -0.42
SNX17-204ENST00000453453 CGB1A6NKQ9 187 aa12.45□□□□□ -0.42
SNX17-204ENST00000453453 E7EUB6 86 aa12.45□□□□□ -0.42
SNX17-204ENST00000453453 HOXA3O43365 443 aaPredicted RBP12.45□□□□□ -0.42
SNX17-204ENST00000453453 OR7C2O60412 319 aa12.45□□□□□ -0.42
SNX17-204ENST00000453453 COTL1Q14019 142 aa12.45□□□□□ -0.42
SNX17-204ENST00000453453 MRPL54Q6P161 138 aaKnown RBP12.45□□□□□ -0.42
SNX17-204ENST00000453453 TMEM86BQ8N661 226 aa12.45□□□□□ -0.42
SNX17-204ENST00000453453 IGHV7-81A0A0B4J1V7 117 aa12.44□□□□□ -0.42
SNX17-204ENST00000453453 TEX22C9J3V5 150 aa12.44□□□□□ -0.42
SNX17-204ENST00000453453 SRD5A1P18405 259 aa12.44□□□□□ -0.42
SNX17-204ENST00000453453 SSBP2P81877 361 aaPredicted RBP12.44□□□□□ -0.42
SNX17-204ENST00000453453 WT1-ASQ06250 92 aa12.44□□□□□ -0.42
SNX17-204ENST00000453453 KIAA1644Q3SXP7 199 aa12.44□□□□□ -0.42
SNX17-204ENST00000453453 TNFRSF19Q9NS68 423 aa12.44□□□□□ -0.42
SNX17-204ENST00000453453 OTOGQ6ZRI0 2925 aa12.44□□□□□ -0.42
SNX17-204ENST00000453453 M0R2Z0 102 aa12.44□□□□□ -0.42
SNX17-204ENST00000453453 CRXO43186 299 aaPredicted RBP12.44□□□□□ -0.42
SNX17-204ENST00000453453 HIST1H1EP10412 219 aaKnown RBP12.44□□□□□ -0.42
SNX17-204ENST00000453453 CT83Q5H943 113 aa12.44□□□□□ -0.42
SNX17-204ENST00000453453 OR4F17Q8NGA8 305 aa12.44□□□□□ -0.42
SNX17-204ENST00000453453 OR1L4Q8NGR5 311 aa12.44□□□□□ -0.42
SNX17-204ENST00000453453 CHCHD1Q96BP2 118 aaKnown RBP12.44□□□□□ -0.42
SNX17-204ENST00000453453 ALKBH7Q9BT30 221 aaPredicted RBP12.44□□□□□ -0.42
SNX17-204ENST00000453453 ZNF469Q96JG9 3925 aaPredicted RBP12.43□□□□□ -0.42
SNX17-204ENST00000453453 PSMB11A5LHX3 300 aa12.43□□□□□ -0.42
SNX17-204ENST00000453453 C2orf70A6NJV1 201 aa12.43□□□□□ -0.42
SNX17-204ENST00000453453 RNASE2P10153 161 aaKnown RBP12.43□□□□□ -0.42
SNX17-204ENST00000453453 MGST1P10620 155 aaKnown RBP12.43□□□□□ -0.42
SNX17-204ENST00000453453 NTF3P20783 257 aa12.43□□□□□ -0.42
SNX17-204ENST00000453453 TCL1AP56279 114 aa12.43□□□□□ -0.42
SNX17-204ENST00000453453 RHOGP84095 191 aa12.43□□□□□ -0.42
SNX17-204ENST00000453453 SLAQ13239 276 aa12.43□□□□□ -0.42
SNX17-204ENST00000453453 SERTAD4Q9NUC0 356 aa12.43□□□□□ -0.42
SNX17-204ENST00000453453 A0A1B0GXF2 115 aa12.42□□□□□ -0.42
SNX17-204ENST00000453453 PPBPP02775 128 aa12.42□□□□□ -0.42
SNX17-204ENST00000453453 APELAP0DMC3 54 aa12.42□□□□□ -0.42
SNX17-204ENST00000453453 NDPQ00604 133 aa12.42□□□□□ -0.42
SNX17-204ENST00000453453 CD69Q07108 199 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms