RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PATE2Q6UY27 113 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 LYZL2Q7Z4W2 148 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 OR5AS1Q8N127 324 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 OTOSQ8NHW6 89 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 CHCHD1Q96BP2 118 aaKnown RBP2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 ATG5Q9H1Y0 275 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 SMDT1Q9H4I9 107 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 BCL2L10Q9HD36 194 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 RPL26L1Q9UNX3 145 aaKnown RBP2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 RIMBP3CA6NJZ7 1639 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 RIMBP3BA6NNM3 1639 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 RIMBP3Q9UFD9 1639 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 DOCK8Q8NF50 2099 aa2.96□□□□□ -1.94
HMGB3P21-201ENST00000452483 NUP205Q92621 2012 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 TRGV5A0A0B4J1U4 118 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 A0A0J9YWU9 116 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 A0A1W2PQD3 144 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 FAM168BA1KXE4 195 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 C7orf66A4D0T2 115 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 FAM24AA6NFZ4 105 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 LYRM1O43325 122 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 HYPMO75409 117 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 CRYGAP11844 174 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 IL7P13232 177 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 NFYAP23511 347 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 MPV17P39210 176 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 RPL28P46779 137 aaKnown RBP2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 RPS10P46783 165 aaKnown RBP2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 XCL1P47992 114 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 CRIP2P52943 208 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 SS18Q15532 418 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 MIC13Q5XKP0 118 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 ZNF660Q6AZW8 331 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 OR2T2Q6IF00 324 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 C2orf91Q6ZV80 131 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 IMMP1LQ96LU5 166 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 BET1LQ9NYM9 111 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 TAS2R4Q9NYW5 299 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 TPRKBQ9Y3C4 175 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 NUP98P52948 1817 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 QRICH2Q9H0J4 1663 aa2.95□□□□□ -1.94
HMGB3P21-201ENST00000452483 ANKRD12Q6UB98 2062 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 MAP3K1Q13233 1512 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 POLEQ07864 2286 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 AHDC1Q5TGY3 1603 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 ANAPC1Q9H1A4 1944 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 MYH13Q9UKX3 1938 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 OOSP1A8MZH6 123 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 SAA1P0DJI8 122 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 MT3P25713 68 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 CKS2P33552 79 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 IGLV3-21P80748 117 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 ZC2HC1BQ5TFG8 222 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 CLEC2BQ92478 149 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 AQP3Q92482 292 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 PSMF1Q92530 271 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 FGF13Q92913 245 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 MRPS24Q96EL2 167 aaKnown RBP2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 COL18A1P39060 1754 aa2.94□□□□□ -1.94
HMGB3P21-201ENST00000452483 KDM5DQ9BY66 1539 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 CCDC88AQ3V6T2 1871 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 DNMBPQ6XZF7 1577 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 RPRD2Q5VT52 1461 aaKnown RBP2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 IGLV3-9A0A075B6K5 115 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 IGKV1OR2-108A0A075B7D4 117 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 M0R2P5 195 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 PITX3O75364 302 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 LHBP01229 141 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 IGLC1P0CG04 106 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 PEBP1P30086 187 aaKnown RBP2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 NOVP48745 357 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 NPC2P61916 151 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 C15orf32Q32M92 178 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 GFI1BQ5VTD9 330 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 OR5AK2Q8NH90 309 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 LSM10Q969L4 123 aaKnown RBP2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 TMEM106BQ9NUM4 274 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 MED9Q9NWA0 146 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 NHP2Q9NX24 153 aaKnown RBP2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 TIMM9Q9Y5J7 89 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 CROCCQ5TZA2 2017 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 BRWD3Q6RI45 1802 aa2.93□□□□□ -1.94
HMGB3P21-201ENST00000452483 TEX14Q8IWB6 1497 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 TRBV6-6A0A0A6YYG2 114 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 IGHV3-15A0A0B4J1V0 119 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 MUC21A0A0G2JKD1 596 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 PINLYPA6NC86 204 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 A8MUU9 505 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 EDF1O60869 148 aaKnown RBP2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 ZNF737O75373 536 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 SNCGO76070 127 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 SHBGP04278 402 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 GYPBP06028 91 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 CCL4P13236 92 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 CD24P25063 80 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 ETV6P41212 452 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 LGALSLQ3ZCW2 172 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 FAM229BQ4G0N7 80 aa2.92□□□□□ -1.94
HMGB3P21-201ENST00000452483 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms