RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 SPINK4O60575 86 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 NXPH3O95157 252 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 IGKV1-39P01597 117 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 IGHV3-53P01767 116 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 IGKV1D-39P04432 117 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 LYZP61626 148 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 TRAM1Q15629 374 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 C2orf83Q53S99 150 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 GFI1BQ5VTD9 330 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 TMEM91Q6ZNR0 172 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 HOGA1Q86XE5 327 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 RNF182Q8N6D2 247 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 OR5AP2Q8NGF4 316 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 OR4D5Q8NGN0 318 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 BAALCQ8WXS3 180 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 MND1Q9BWT6 205 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 SLC25A31Q9H0C2 315 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 SLC25A32Q9H2D1 315 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 GSN-AS1Q9NRJ2 163 aa5.04□□□□□ -1.6
LINC01961-201ENST00000449954 TRAV8-2A0A0B4J237 113 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 PDCD5O14737 125 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 GATA2P23769 480 aaPredicted RBP5.03□□□□□ -1.6
LINC01961-201ENST00000449954 PPT1P50897 306 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 TAS2R20P59543 309 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 STEAP1BQ6NZ63 245 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 REG3GQ6UW15 175 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 NOXA1Q86UR1 476 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 C11orf72Q8NBR9 251 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 ZNF555Q8NEP9 628 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 UFD1Q92890 307 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 KRTAP9-8Q9BYQ0 159 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 SLC25A22Q9H936 323 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 DIABLOQ9NR28 239 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 SLC45A2Q9UMX9 530 aa5.03□□□□□ -1.6
LINC01961-201ENST00000449954 TRGV4A0A0C4DH28 118 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 ZFP92A6NM28 416 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 SNRPGP15A8MWD9 76 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 ATG12O94817 140 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 S100A7P31151 101 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 AKR1C2P52895 323 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 TCL1AP56279 114 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 SPHARQ15513 63 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 IZUMO4Q1ZYL8 232 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 C14orf177Q52M58 125 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 C1orf146Q5VVC0 180 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 DHRS11Q6UWP2 260 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 AHSA2Q719I0 299 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 IQCF2Q8IXL9 164 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 IL22RA2Q969J5 263 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 RMI2Q96E14 147 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 C9orf16Q9BUW7 83 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 EHFQ9NZC4 300 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 TMEM56-RWDD3S4R434 201 aa5.02□□□□□ -1.61
LINC01961-201ENST00000449954 TRAV8-1A0A0A6YYK1 113 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 IGHV3-30P01768 117 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 IGHV3-33P01772 117 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 IGHV3-30-3P0DP02 117 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 IGHV3-30-5P0DP03 117 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 CXCL3P19876 107 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 ZNF90Q03938 601 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 KLF9Q13886 244 aaPredicted RBP5.01□□□□□ -1.61
LINC01961-201ENST00000449954 ANXA2RQ3ZCQ2 193 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 PHLDA2Q53GA4 152 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 OR10J3Q5JRS4 329 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 IBA57Q5T440 356 aaKnown RBP5.01□□□□□ -1.61
LINC01961-201ENST00000449954 LPCAT3Q6P1A2 487 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 TBC1D26Q86UD7 250 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 CCDC190Q86UF4 302 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 ZNF2Q9BSG1 426 aaPredicted RBP5.01□□□□□ -1.61
LINC01961-201ENST00000449954 FXYD6Q9H0Q3 95 aa5.01□□□□□ -1.61
LINC01961-201ENST00000449954 HEYLQ9NQ87 328 aaPredicted RBP5.01□□□□□ -1.61
LINC01961-201ENST00000449954 CFDP00746 253 aaPredicted RBP5□□□□□ -1.61
LINC01961-201ENST00000449954 IGKV1-5P01602 117 aa5□□□□□ -1.61
LINC01961-201ENST00000449954 SPCS3P61009 180 aa5□□□□□ -1.61
LINC01961-201ENST00000449954 FGL1Q08830 312 aa5□□□□□ -1.61
LINC01961-201ENST00000449954 FAM122CQ6P4D5 195 aa5□□□□□ -1.61
LINC01961-201ENST00000449954 RPUSD4Q96CM3 377 aaKnown RBP5□□□□□ -1.61
LINC01961-201ENST00000449954 MED4Q9NPJ6 270 aa5□□□□□ -1.61
LINC01961-201ENST00000449954 PSORS1C1Q9UIG5 152 aa5□□□□□ -1.61
LINC01961-201ENST00000449954 TRAV1-2A0A0B4J238 106 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 TRAV12-3A0A0B4J271 114 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 GABARAPH6UMI1 98 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 GABARAPO95166 117 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 RAB3BP20337 219 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 HRH1P35367 487 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 LEPP41159 167 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 AARDQ4LEZ3 155 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 EIF4E3Q8N5X7 224 aaKnown RBP4.99□□□□□ -1.61
LINC01961-201ENST00000449954 NHLRC2Q8NBF2 726 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 ODF3Q96PU9 254 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 ACOT13Q9NPJ3 140 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 MRPL16Q9NX20 251 aaKnown RBP4.99□□□□□ -1.61
LINC01961-201ENST00000449954 VAX2Q9UIW0 290 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 LSM2Q9Y333 95 aaKnown RBP4.99□□□□□ -1.61
LINC01961-201ENST00000449954 KLF12Q9Y4X4 402 aa4.99□□□□□ -1.61
LINC01961-201ENST00000449954 IGKV1D-37A0A075B6S9 117 aa4.98□□□□□ -1.61
LINC01961-201ENST00000449954 GGTLC3B5MD39 225 aa4.98□□□□□ -1.61
LINC01961-201ENST00000449954 RPL7P18124 248 aaKnown RBP4.98□□□□□ -1.61
LINC01961-201ENST00000449954 MYL9P24844 172 aa4.98□□□□□ -1.61
LINC01961-201ENST00000449954 RFX2P48378 723 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms