RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 KRTAP21-3Q3LHN1 58 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 GLMPQ8WWB7 406 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 GRAMD2BQ96HH9 432 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 TMEM231Q9H6L2 316 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 SIGLEC8Q9NYZ4 499 aa10.66□□□□□ -0.7
SHMT2-203ENST00000449049 MAP1LC3B2A6NCE7 125 aa10.65□□□□□ -0.7
SHMT2-203ENST00000449049 UBE2CO00762 179 aa10.65□□□□□ -0.7
SHMT2-203ENST00000449049 MRPS12O15235 138 aaKnown RBP10.65□□□□□ -0.7
SHMT2-203ENST00000449049 HMGB3O15347 200 aaKnown RBP10.65□□□□□ -0.7
SHMT2-203ENST00000449049 ZNF503Q96F45 646 aa10.65□□□□□ -0.7
SHMT2-203ENST00000449049 ELOVL1Q9BW60 279 aa10.65□□□□□ -0.7
SHMT2-203ENST00000449049 MAP1LC3BQ9GZQ8 125 aa10.65□□□□□ -0.7
SHMT2-203ENST00000449049 TMEM14CQ9P0S9 112 aa10.65□□□□□ -0.7
SHMT2-203ENST00000449049 ATRQ13535 2644 aa10.65□□□□□ -0.71
SHMT2-203ENST00000449049 GP9P14770 177 aa10.64□□□□□ -0.71
SHMT2-203ENST00000449049 LCN15Q6UWW0 184 aa10.64□□□□□ -0.71
SHMT2-203ENST00000449049 PQLC2Q6ZP29 291 aa10.64□□□□□ -0.71
SHMT2-203ENST00000449049 C15orf54Q8N8G6 183 aa10.64□□□□□ -0.71
SHMT2-203ENST00000449049 STXBP6Q8NFX7 210 aa10.64□□□□□ -0.71
SHMT2-203ENST00000449049 GPR82Q96P67 336 aa10.64□□□□□ -0.71
SHMT2-203ENST00000449049 SMCO4Q9NRQ5 59 aa10.64□□□□□ -0.71
SHMT2-203ENST00000449049 TRAV1-1A0A0B4J248 108 aa10.64□□□□□ -0.71
SHMT2-203ENST00000449049 RPL7P18124 248 aaKnown RBP10.64□□□□□ -0.71
SHMT2-203ENST00000449049 RNF212Q495C1 297 aa10.64□□□□□ -0.71
SHMT2-203ENST00000449049 BPIFA4PQ86YQ2 179 aa10.64□□□□□ -0.71
SHMT2-203ENST00000449049 OR8I2Q8N0Y5 310 aa10.64□□□□□ -0.71
SHMT2-203ENST00000449049 C1orf196B1AJZ1 125 aa10.63□□□□□ -0.71
SHMT2-203ENST00000449049 CXorf1O96002 111 aa10.63□□□□□ -0.71
SHMT2-203ENST00000449049 ARL14EPLP0DKL9 152 aa10.63□□□□□ -0.71
SHMT2-203ENST00000449049 TCEAL7Q9BRU2 100 aa10.63□□□□□ -0.71
SHMT2-203ENST00000449049 TENM1Q9UKZ4 2725 aa10.63□□□□□ -0.71
SHMT2-203ENST00000449049 OR7C2O60412 319 aa10.63□□□□□ -0.71
SHMT2-203ENST00000449049 FGF8P55075 233 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-203ENST00000449049 C21orf62-AS1Q17RA5 79 aa10.63□□□□□ -0.71
SHMT2-203ENST00000449049 SIGLEC15Q6ZMC9 328 aa10.63□□□□□ -0.71
SHMT2-203ENST00000449049 WFDC9Q8NEX5 89 aa10.63□□□□□ -0.71
SHMT2-203ENST00000449049 SPATA3Q8NHX4 192 aa10.63□□□□□ -0.71
SHMT2-203ENST00000449049 LYPD6BQ8NI32 183 aa10.63□□□□□ -0.71
SHMT2-203ENST00000449049 PAXXQ9BUH6 204 aa10.63□□□□□ -0.71
SHMT2-203ENST00000449049 HBE1P02100 147 aa10.62□□□□□ -0.71
SHMT2-203ENST00000449049 CD5P06127 495 aa10.62□□□□□ -0.71
SHMT2-203ENST00000449049 IGLC2P0DOY2 106 aa10.62□□□□□ -0.71
SHMT2-203ENST00000449049 PYYP10082 97 aa10.62□□□□□ -0.71
SHMT2-203ENST00000449049 FAM90A2PQ658T7 463 aa10.62□□□□□ -0.71
SHMT2-203ENST00000449049 FXYD5Q96DB9 178 aa10.62□□□□□ -0.71
SHMT2-203ENST00000449049 SMAD5-AS1Q9Y6J3 95 aa10.62□□□□□ -0.71
SHMT2-203ENST00000449049 HELTA6NFD8 242 aa10.61□□□□□ -0.71
SHMT2-203ENST00000449049 SFTA3P0C7M3 94 aa10.61□□□□□ -0.71
SHMT2-203ENST00000449049 GCHFRP30047 84 aa10.61□□□□□ -0.71
SHMT2-203ENST00000449049 GALR1P47211 349 aa10.61□□□□□ -0.71
SHMT2-203ENST00000449049 HRH4Q9H3N8 390 aa10.61□□□□□ -0.71
SHMT2-203ENST00000449049 CBY1Q9Y3M2 126 aa10.61□□□□□ -0.71
SHMT2-203ENST00000449049 A0A087X0K7 114 aa10.61□□□□□ -0.71
SHMT2-203ENST00000449049 UBE2L3P68036 154 aaKnown RBP10.61□□□□□ -0.71
SHMT2-203ENST00000449049 DEFB114Q30KQ6 69 aa10.61□□□□□ -0.71
SHMT2-203ENST00000449049 TCF24Q7RTU0 167 aa10.61□□□□□ -0.71
SHMT2-203ENST00000449049 DYNLRB2Q8TF09 96 aa10.61□□□□□ -0.71
SHMT2-203ENST00000449049 HIST1H2BAQ96A08 127 aa10.61□□□□□ -0.71
SHMT2-203ENST00000449049 C17orf77Q96MU5 243 aa10.61□□□□□ -0.71
SHMT2-203ENST00000449049 SAP30O75446 220 aa10.6□□□□□ -0.71
SHMT2-203ENST00000449049 OR10J4P0C629 311 aa10.6□□□□□ -0.71
SHMT2-203ENST00000449049 HIST1H1EP10412 219 aaKnown RBP10.6□□□□□ -0.71
SHMT2-203ENST00000449049 TMPRSS5Q9H3S3 457 aa10.6□□□□□ -0.71
SHMT2-203ENST00000449049 A0A1B0GV50 99 aa10.6□□□□□ -0.71
SHMT2-203ENST00000449049 H3BQ15 152 aa10.6□□□□□ -0.71
SHMT2-203ENST00000449049 MT-ND4LP03901 98 aa10.6□□□□□ -0.71
SHMT2-203ENST00000449049 CD33P20138 364 aa10.6□□□□□ -0.71
SHMT2-203ENST00000449049 CCL20P78556 96 aa10.6□□□□□ -0.71
SHMT2-203ENST00000449049 DEFA6Q01524 100 aa10.6□□□□□ -0.71
SHMT2-203ENST00000449049 TMEM167BQ9NRX6 74 aa10.6□□□□□ -0.71
SHMT2-203ENST00000449049 ZNF586Q9NXT0 402 aa10.6□□□□□ -0.71
SHMT2-203ENST00000449049 SELENOKQ9Y6D0 94 aa10.6□□□□□ -0.71
SHMT2-203ENST00000449049 PSMB3P49720 205 aa10.59□□□□□ -0.71
SHMT2-203ENST00000449049 GUK1Q16774 197 aa10.59□□□□□ -0.71
SHMT2-203ENST00000449049 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.59□□□□□ -0.71
SHMT2-203ENST00000449049 MCRIP2Q9BUT9 160 aaKnown RBP10.59□□□□□ -0.71
SHMT2-203ENST00000449049 TUBA4BQ9H853 241 aa10.59□□□□□ -0.71
SHMT2-203ENST00000449049 TRBV19A0A075B6N1 114 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 A0A1B0GV90 55 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 ZNF785A8K8V0 405 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 IGLV1-51P01701 117 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 NBEAP1P0C6P0 100 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 PPT1P50897 306 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 OR2K2Q8NGT1 345 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 ZNF253O75346 499 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 SNRPCP09234 159 aaKnown RBP10.58□□□□□ -0.72
SHMT2-203ENST00000449049 INSL3P51460 131 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 TAS2R60P59551 318 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 FABP9Q0Z7S8 132 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 PMS2P11Q13670 270 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 PDE6HQ13956 83 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 CD300EQ496F6 205 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-203ENST00000449049 C9orf66Q5T8R8 295 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 TMEM61Q8N0U2 210 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 NRN1Q9NPD7 142 aa10.58□□□□□ -0.72
SHMT2-203ENST00000449049 TRAV25A0A0B4J276 109 aa10.57□□□□□ -0.72
SHMT2-203ENST00000449049 C9JQL5 133 aa10.57□□□□□ -0.72
SHMT2-203ENST00000449049 PCP4P48539 62 aa10.57□□□□□ -0.72
SHMT2-203ENST00000449049 RAB4BP61018 213 aa10.57□□□□□ -0.72
SHMT2-203ENST00000449049 RPL11P62913 178 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms