RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 SLC25A38Q96DW6 304 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 TVP23CQ96ET8 276 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 FAM210BQ96KR6 192 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 FBLN5Q9UBX5 448 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM238LA0A1B0GVL6 79 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 A6NJY4 79 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 C16orf90A8MZG2 172 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM50AO95807 157 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 OR1P1Q8NH06 330 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 SIRPDQ9H106 197 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 TRAV21A0A0B4J279 112 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 H2AFB1P0C5Y9 115 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM50BP56557 158 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM222Q9H0R3 208 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 IFI27L2Q9H2X8 130 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 TRGV11A0A075B6L2 103 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 F8VVB4 439 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 F8VWA3 439 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 FOLR2P14207 255 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 GEMIN7Q9H840 131 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 TRAV10A0A0B4J240 114 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM91Q6ZNR0 172 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 NIT1Q86X76 327 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 OR5C1Q8NGR4 320 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 C4orf3Q8WVX3 66 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 NAA50Q9GZZ1 169 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 C3orf84H3BNL1 204 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 CTF1Q16619 201 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 C10orf55Q5SWW7 151 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 NFE4Q86UQ8 179 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 OR10W1Q8NGF6 305 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 CACNG8Q8WXS5 425 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 SOSTQ9BQB4 213 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 RFNGQ9Y644 331 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 TRAV3A0A0B4J244 114 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 PPP1R1AQ13522 171 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 OR2K2Q8NGT1 345 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 SLC50A1Q9BRV3 221 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 NDUFA7O95182 113 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM136Q6ZRR5 245 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM37Q8WXS4 190 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 GPHA2Q96T91 129 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 ADARB2-AS1A8MUL3 147 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 ITGB1BP1O14713 200 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 EIF3GO75821 320 aaKnown RBP eCLIP4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 UCP3P55916 312 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 ZNF818PQ6ZRF7 136 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 RBKSQ9H477 322 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 MFSD2BA6NFX1 497 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 C1orf134Q5TEV5 83 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 Q6P435 159 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 PRSS54Q6PEW0 395 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 LYZL2Q7Z4W2 148 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 SRSF8Q9BRL6 282 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 ICOSQ9Y6W8 199 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 IGHV3-73A0A0B4J1V6 119 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 SIX6O95475 246 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 MORN3Q6PF18 240 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 PHLDA1Q8WV24 401 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 MDFIQ99750 246 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 PXMP4Q9Y6I8 212 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 IGKV1-27A0A075B6S5 117 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 TRAV12-3A0A0B4J271 114 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 PRSS1P07477 247 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM241Q24JQ0 296 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 KHDC3LQ587J8 217 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 HIST2H2BDQ6DRA6 164 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 Q6ZWC4 215 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 U3KQE9 123 aa4.47□□□□□ -1.69
CDC42BPA-209ENST00000448940 IFITM10A6NMD0 228 aa4.46□□□□□ -1.69
CDC42BPA-209ENST00000448940 H7C2G1 150 aa4.46□□□□□ -1.69
CDC42BPA-209ENST00000448940 APOMO95445 188 aa4.46□□□□□ -1.69
CDC42BPA-209ENST00000448940 RBMY1FQ15415 496 aaKnown RBP4.46□□□□□ -1.69
CDC42BPA-209ENST00000448940 CLEC18BQ6UXF7 455 aa4.46□□□□□ -1.69
CDC42BPA-209ENST00000448940 BAALCQ8WXS3 180 aa4.46□□□□□ -1.69
CDC42BPA-209ENST00000448940 NXT2Q9NPJ8 142 aaKnown RBP4.46□□□□□ -1.69
CDC42BPA-209ENST00000448940 MAP1LC3B2A6NCE7 125 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 TNFRSF6BO95407 300 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 MT-ND4LP03901 98 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 ATP5G1P05496 136 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 FABP4P15090 132 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 CDX1P47902 265 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 ATP5G3P48201 142 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 TNFRSF9Q07011 255 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 ZNF524Q96C55 264 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 MAP1LC3BQ9GZQ8 125 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 TMEM89A2RUT3 159 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 FABP9Q0Z7S8 132 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 APRG1Q8IVJ8 170 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 A0A087X0M5 115 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 A0A1B0GX30 115 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 C11orf94C9JXX5 98 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 M0R381 172 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 CTDSPLO15194 276 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 NDUFB6O95139 128 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 HLA-DQB1P01920 261 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 RPL36AP83881 106 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 C14orf177Q52M58 125 aa4.46□□□□□ -1.7
CDC42BPA-209ENST00000448940 WDR86Q86TI4 376 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms