RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 MDFICQ9P1T7 246 aa4.93□□□□□ -1.62
LRRC28-203ENST00000447360 PIGBOS1A0A0B4J2F0 54 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 KRTAP29-1A8MX34 341 aaPredicted RBP4.92□□□□□ -1.62
LRRC28-203ENST00000447360 F5H768 121 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 WRBO00258 174 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 BUB3O43684 328 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 SYNGR2O43760 224 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 IFNA5P01569 189 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 SMR3BP02814 79 aaPredicted RBP4.92□□□□□ -1.62
LRRC28-203ENST00000447360 IL4P05112 153 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 HNRNPCP07910 306 aaKnown RBP eCLIP4.92□□□□□ -1.62
LRRC28-203ENST00000447360 RD3LP0DJH9 198 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 INPP1P49441 399 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 PAX9P55771 341 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 ZNF90Q03938 601 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 ICAM4Q14773 271 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 SPATA31B1PQ5VZV4 182 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 TMEM182Q6ZP80 229 aaPredicted RBP4.92□□□□□ -1.62
LRRC28-203ENST00000447360 OR4D5Q8NGN0 318 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 UPK3BQ9BT76 320 aa4.92□□□□□ -1.62
LRRC28-203ENST00000447360 PMS2P5A8MQ11 134 aa4.91□□□□□ -1.62
LRRC28-203ENST00000447360 MED6O75586 246 aa4.91□□□□□ -1.62
LRRC28-203ENST00000447360 IGKV3-20P01619 116 aa4.91□□□□□ -1.62
LRRC28-203ENST00000447360 FXYD7P58549 80 aa4.91□□□□□ -1.62
LRRC28-203ENST00000447360 POLR2GP62487 172 aaKnown RBP eCLIP4.91□□□□□ -1.62
LRRC28-203ENST00000447360 DLK1P80370 383 aa4.91□□□□□ -1.62
LRRC28-203ENST00000447360 GDF5OSQ5U4N7 250 aa4.91□□□□□ -1.62
LRRC28-203ENST00000447360 FOXI2Q6ZQN5 318 aa4.91□□□□□ -1.62
LRRC28-203ENST00000447360 C1orf158Q8N1D5 194 aa4.91□□□□□ -1.62
LRRC28-203ENST00000447360 THAP8Q8NA92 274 aa4.91□□□□□ -1.62
LRRC28-203ENST00000447360 OR51G1Q8NGK1 321 aa4.91□□□□□ -1.62
LRRC28-203ENST00000447360 MITD1Q8WV92 249 aa4.91□□□□□ -1.62
LRRC28-203ENST00000447360 SAV1Q9H4B6 383 aaPredicted RBP4.91□□□□□ -1.62
LRRC28-203ENST00000447360 CBY3A6NI87 242 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 ZFP92A6NM28 416 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 CENPXA8MT69 81 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 H3BP45 60 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 LYRM1O43325 122 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 TCRBP04435 133 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 ATP5G1P05496 136 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 DEFB130BP0DP73 79 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 DEFB130AP0DP74 79 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 ATP5G3P48201 142 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 KRTAP10-1P60331 282 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 RAB11AP62491 216 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 PSG9Q00887 426 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 OR2F1Q13607 317 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 CNPY1Q3B7I2 92 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 SPANXN5Q5MJ07 72 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 SIGLEC15Q6ZMC9 328 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 Q6ZRN7 208 aaPredicted RBP4.9□□□□□ -1.63
LRRC28-203ENST00000447360 COQ8AQ8NI60 647 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 SLC35E1Q96K37 410 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 SMIM8Q96KF7 97 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 CIB3Q96Q77 187 aaPredicted RBP4.9□□□□□ -1.63
LRRC28-203ENST00000447360 TRGV9Q99603 122 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 SLC35B3Q9H1N7 401 aa4.9□□□□□ -1.63
LRRC28-203ENST00000447360 LRP1Q07954 4544 aaKnown RBP4.9□□□□□ -1.63
LRRC28-203ENST00000447360 GAGE10A6NGK3 116 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 C9orf118A6NHY6 69 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 SNRPGP15A8MWD9 76 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 CCNKO75909 580 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 GATA2P23769 480 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-203ENST00000447360 TSPOP30536 169 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 LINC00315P59091 139 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 ERVFC1-1P60608 527 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 IFITM3Q01628 133 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 IAH1Q2TAA2 248 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-203ENST00000447360 OR8G2PQ6IF36 304 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 TMEM14EPQ6UXP3 125 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 ZBTB8BQ8NAP8 495 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-203ENST00000447360 OR4B1Q8NGF8 309 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 TMEM208Q9BTX3 173 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 CCDC32Q9BV29 185 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 PBDC1Q9BVG4 233 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 C20orf85Q9H1P6 137 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 ZNF586Q9NXT0 402 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 PSENENQ9NZ42 101 aa4.89□□□□□ -1.63
LRRC28-203ENST00000447360 PAIP2BQ9ULR5 123 aaKnown RBP4.89□□□□□ -1.63
LRRC28-203ENST00000447360 STRAPQ9Y3F4 350 aaKnown RBP4.89□□□□□ -1.63
LRRC28-203ENST00000447360 TRAV6A0A075B6T7 132 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 C7orf66A4D0T2 115 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 SOCS3O14543 225 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 MBPP02686 304 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-203ENST00000447360 GCSHP23434 173 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 FUSP35637 526 aaKnown RBP eCLIP4.88□□□□□ -1.63
LRRC28-203ENST00000447360 ID1P41134 155 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 PSMB3P49720 205 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 DEFB1P60022 68 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 LYZP61626 148 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 B2MP61769 119 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 ARL16Q0P5N6 197 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 IL15RAQ13261 267 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 C1orf194Q5T5A4 169 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 FAM78BQ5VT40 261 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 EBLN2Q6P2I7 272 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 ACOT7LQ6ZUV0 252 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 TMEM144Q7Z5S9 345 aa4.88□□□□□ -1.63
LRRC28-203ENST00000447360 ZNF431Q8TF32 576 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-203ENST00000447360 IGF2BP2-AS1Q96M15 143 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms