RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 TMEM128Q5BJH2 165 aa16.9■□□□□ 0.3
PMS1-214ENST00000446877 CYP2G1PQ6ZSU1 146 aa16.9■□□□□ 0.3
PMS1-214ENST00000446877 CCDC28AQ8IWP9 274 aa16.9■□□□□ 0.3
PMS1-214ENST00000446877 UPK3BQ9BT76 320 aa16.9■□□□□ 0.3
PMS1-214ENST00000446877 STRAPQ9Y3F4 350 aaKnown RBP16.9■□□□□ 0.3
PMS1-214ENST00000446877 NOL3O60936 208 aaKnown RBP16.89■□□□□ 0.29
PMS1-214ENST00000446877 OR5G3P0C626 314 aa16.89■□□□□ 0.29
PMS1-214ENST00000446877 VAMP1P23763 118 aa16.89■□□□□ 0.29
PMS1-214ENST00000446877 ESRGQ1W209 222 aa16.89■□□□□ 0.29
PMS1-214ENST00000446877 ACOT7LQ6ZUV0 252 aa16.89■□□□□ 0.29
PMS1-214ENST00000446877 RPUSD4Q96CM3 377 aaKnown RBP16.89■□□□□ 0.29
PMS1-214ENST00000446877 ZNF701M0R085 212 aaPredicted RBP16.88■□□□□ 0.29
PMS1-214ENST00000446877 LRTM2Q8N967 370 aa16.88■□□□□ 0.29
PMS1-214ENST00000446877 A0A087X0K7 114 aa16.87■□□□□ 0.29
PMS1-214ENST00000446877 H3BP45 60 aa16.87■□□□□ 0.29
PMS1-214ENST00000446877 SPCS2Q15005 226 aa16.87■□□□□ 0.29
PMS1-214ENST00000446877 C20orf144Q9BQM9 153 aa16.87■□□□□ 0.29
PMS1-214ENST00000446877 ZNF586Q9NXT0 402 aa16.87■□□□□ 0.29
PMS1-214ENST00000446877 MRPS16Q9Y3D3 137 aaKnown RBP16.87■□□□□ 0.29
PMS1-214ENST00000446877 GAGE12BA1L429 117 aa16.86■□□□□ 0.29
PMS1-214ENST00000446877 GAGE7O76087 117 aa16.86■□□□□ 0.29
PMS1-214ENST00000446877 RLN2P04090 185 aa16.86■□□□□ 0.29
PMS1-214ENST00000446877 LINC00869P0C866 280 aa16.86■□□□□ 0.29
PMS1-214ENST00000446877 GAGE12FP0CL80 117 aa16.86■□□□□ 0.29
PMS1-214ENST00000446877 GAGE12GP0CL81 117 aa16.86■□□□□ 0.29
PMS1-214ENST00000446877 GAGE12IP0CL82 117 aa16.86■□□□□ 0.29
PMS1-214ENST00000446877 ANXA7P20073 488 aaKnown RBP16.86■□□□□ 0.29
PMS1-214ENST00000446877 FAUP35544 74 aaKnown RBP16.86■□□□□ 0.29
PMS1-214ENST00000446877 SELENOTP62341 195 aa16.86■□□□□ 0.29
PMS1-214ENST00000446877 PTTG2Q9NZH5 202 aa16.86■□□□□ 0.29
PMS1-214ENST00000446877 RNF24Q9Y225 148 aa16.86■□□□□ 0.29
PMS1-214ENST00000446877 H3BMQ9 156 aa16.85■□□□□ 0.29
PMS1-214ENST00000446877 H3BNG1 76 aa16.85■□□□□ 0.29
PMS1-214ENST00000446877 PRB4P10163 310 aaPredicted RBP16.85■□□□□ 0.29
PMS1-214ENST00000446877 HOXA5P20719 270 aa16.85■□□□□ 0.29
PMS1-214ENST00000446877 SNURFLB1AK76 121 aa16.84■□□□□ 0.29
PMS1-214ENST00000446877 HOXB5P09067 269 aa16.84■□□□□ 0.29
PMS1-214ENST00000446877 PLP1P60201 277 aa16.84■□□□□ 0.29
PMS1-214ENST00000446877 LINC00612Q8N6U2 182 aa16.84■□□□□ 0.29
PMS1-214ENST00000446877 RBM38Q9H0Z9 239 aaKnown RBP16.84■□□□□ 0.29
PMS1-214ENST00000446877 DMBT1Q9UGM3 2413 aaPredicted RBP16.84■□□□□ 0.29
PMS1-214ENST00000446877 CCDC160A6NGH7 325 aa16.83■□□□□ 0.28
PMS1-214ENST00000446877 DYNC2LI1Q8TCX1 351 aa16.83■□□□□ 0.28
PMS1-214ENST00000446877 ARL6Q9H0F7 186 aa16.83■□□□□ 0.28
PMS1-214ENST00000446877 PGPEP1Q9NXJ5 209 aa16.83■□□□□ 0.28
PMS1-214ENST00000446877 NDUFA13Q9P0J0 144 aa16.83■□□□□ 0.28
PMS1-214ENST00000446877 FABP12A6NFH5 140 aa16.82■□□□□ 0.28
PMS1-214ENST00000446877 PMS2P5A8MQ11 134 aa16.82■□□□□ 0.28
PMS1-214ENST00000446877 EREGO14944 169 aa16.82■□□□□ 0.28
PMS1-214ENST00000446877 INAFM2P0DMQ5 153 aa16.82■□□□□ 0.28
PMS1-214ENST00000446877 FAT1Q14517 4588 aa16.82■□□□□ 0.28
PMS1-214ENST00000446877 CXCL2P19875 107 aa16.81■□□□□ 0.28
PMS1-214ENST00000446877 LCN15Q6UWW0 184 aa16.81■□□□□ 0.28
PMS1-214ENST00000446877 CCDC190Q86UF4 302 aa16.81■□□□□ 0.28
PMS1-214ENST00000446877 CCDC59Q9P031 241 aaKnown RBP16.81■□□□□ 0.28
PMS1-214ENST00000446877 SFT2D2O95562 160 aa16.8■□□□□ 0.28
PMS1-214ENST00000446877 LINC00315P59091 139 aa16.8■□□□□ 0.28
PMS1-214ENST00000446877 AP3S2P59780 193 aa16.8■□□□□ 0.28
PMS1-214ENST00000446877 KIR3DS1Q14943 382 aa16.8■□□□□ 0.28
PMS1-214ENST00000446877 GFI1BQ5VTD9 330 aa16.8■□□□□ 0.28
PMS1-214ENST00000446877 SLC50A1Q9BRV3 221 aa16.8■□□□□ 0.28
PMS1-214ENST00000446877 ARV1Q9H2C2 271 aa16.8■□□□□ 0.28
PMS1-214ENST00000446877 PSENENQ9NZ42 101 aa16.8■□□□□ 0.28
PMS1-214ENST00000446877 SLC25A21Q9BQT8 299 aaPredicted RBP16.79■□□□□ 0.28
PMS1-214ENST00000446877 PARD6GQ9BYG4 376 aaPredicted RBP16.79■□□□□ 0.28
PMS1-214ENST00000446877 ZNF331Q9NQX6 463 aaPredicted RBP16.79■□□□□ 0.28
PMS1-214ENST00000446877 POLR2GP62487 172 aaKnown RBP eCLIP16.78■□□□□ 0.28
PMS1-214ENST00000446877 PPP1R1AQ13522 171 aa16.78■□□□□ 0.28
PMS1-214ENST00000446877 TMPRSS5Q9H3S3 457 aa16.78■□□□□ 0.28
PMS1-214ENST00000446877 NPVFQ9HCQ7 196 aa16.78■□□□□ 0.28
PMS1-214ENST00000446877 MRPS12O15235 138 aaKnown RBP16.77■□□□□ 0.28
PMS1-214ENST00000446877 SNRPCP09234 159 aaKnown RBP16.77■□□□□ 0.28
PMS1-214ENST00000446877 TNFSF8P32971 234 aa16.77■□□□□ 0.28
PMS1-214ENST00000446877 RRAS2P62070 204 aaPredicted RBP16.77■□□□□ 0.28
PMS1-214ENST00000446877 ID3Q02535 119 aa16.77■□□□□ 0.28
PMS1-214ENST00000446877 PXDC1Q5TGL8 231 aa16.77■□□□□ 0.28
PMS1-214ENST00000446877 PATE2Q6UY27 113 aa16.77■□□□□ 0.28
PMS1-214ENST00000446877 TOMM5Q8N4H5 51 aa16.77■□□□□ 0.28
PMS1-214ENST00000446877 MCFD2Q8NI22 146 aa16.77■□□□□ 0.28
PMS1-214ENST00000446877 SOSTQ9BQB4 213 aa16.77■□□□□ 0.28
PMS1-214ENST00000446877 J3KRW8 73 aa16.76■□□□□ 0.27
PMS1-214ENST00000446877 LINC00305Q7Z4B0 112 aa16.76■□□□□ 0.27
PMS1-214ENST00000446877 TRGV2A0A075B6R0 118 aa16.75■□□□□ 0.27
PMS1-214ENST00000446877 A0A096LPF7 62 aa16.75■□□□□ 0.27
PMS1-214ENST00000446877 TRAV12-3A0A0B4J271 114 aa16.75■□□□□ 0.27
PMS1-214ENST00000446877 GOSR2O14653 212 aa16.75■□□□□ 0.27
PMS1-214ENST00000446877 SIVA1O15304 175 aa16.75■□□□□ 0.27
PMS1-214ENST00000446877 ERVFC1-1P60608 527 aa16.75■□□□□ 0.27
PMS1-214ENST00000446877 DAZ2Q13117 558 aaKnown RBP16.75■□□□□ 0.27
PMS1-214ENST00000446877 TEPPQ6URK8 271 aa16.75■□□□□ 0.27
PMS1-214ENST00000446877 Q6ZTI0 123 aa16.75■□□□□ 0.27
PMS1-214ENST00000446877 BPIFA4PQ86YQ2 179 aa16.75■□□□□ 0.27
PMS1-214ENST00000446877 LYPD1Q8N2G4 141 aa16.75■□□□□ 0.27
PMS1-214ENST00000446877 SLIRPQ9GZT3 109 aaKnown RBP16.75■□□□□ 0.27
PMS1-214ENST00000446877 MGAT4CQ9UBM8 478 aa16.75■□□□□ 0.27
PMS1-214ENST00000446877 PRAC2D3DTV9 90 aa16.74■□□□□ 0.27
PMS1-214ENST00000446877 K7EPK0 472 aa16.74■□□□□ 0.27
PMS1-214ENST00000446877 SSSCA1O60232 199 aa16.74■□□□□ 0.27
PMS1-214ENST00000446877 LEPP41159 167 aa16.74■□□□□ 0.27
PMS1-214ENST00000446877 SLC38A11Q08AI6 406 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms