RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SPANXB1Q9NS25 103 aaPredicted RBP6.43□□□□□ -1.38
SMG1-202ENST00000446231 RLFQ13129 1914 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 ZCCHC24Q8N2G6 241 aaKnown RBP6.43□□□□□ -1.38
SMG1-202ENST00000446231 SS18L1O75177 396 aaPredicted RBP6.43□□□□□ -1.38
SMG1-202ENST00000446231 HTN1P15515 57 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 PRDM6Q9NQX0 595 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 CCL8P80075 99 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 QSER1Q2KHR3 1735 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.43□□□□□ -1.38
SMG1-202ENST00000446231 FABP5P3A8MUU1 101 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 ZC2HC1AQ96GY0 325 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 IGKV3D-15A0A087WSY6 115 aa6.43□□□□□ -1.38
SMG1-202ENST00000446231 TAL2Q16559 108 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 PSPNO60542 156 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 FAM106CPP0CH98 169 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 Q86TA4 180 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 ATP5G2Q06055 141 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 PLEKHB2Q96CS7 222 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 ASPHD1Q5U4P2 390 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 SH2D1AO60880 128 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 TCTEX1D4Q5JR98 221 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 FOXI2Q6ZQN5 318 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 EFEMP2O95967 443 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 PRRG2O14669 202 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 CLUHP3Q96NS8 147 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 C21orf62Q9NYP8 219 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 M0R2P5 195 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 FCN3O75636 299 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 TFF1P04155 84 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 RNASE2P10153 161 aaKnown RBP6.42□□□□□ -1.38
SMG1-202ENST00000446231 LINC00205P59089 165 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 DKK2Q9UBU2 259 aa6.42□□□□□ -1.38
SMG1-202ENST00000446231 PRSS46E5RG02 174 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 C16orf97H3BN30 126 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 RNF182Q8N6D2 247 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 TMEM158Q8WZ71 300 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 RNF183Q96D59 192 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 A0A0G2JMZ2 1700 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 LRRC37A2A6NM11 1700 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 LRRC37AA6NMS7 1700 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 SRSF6Q13247 344 aaKnown RBP6.41□□□□□ -1.38
SMG1-202ENST00000446231 PRR33A8MZF0 331 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 IGHV3-49A0A0A0MS15 119 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 NPIPB5A8MRT5 1133 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 ANXA2RQ3ZCQ2 193 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 IMMP1LQ96LU5 166 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 TMEM14BQ9NUH8 114 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 SIP14410 1827 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 PAX1P15863 534 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 C8orf86Q6ZUL3 223 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 HES7Q9BYE0 225 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 C5orf67F2Z3F1 127 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 TRACP01848 142 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 GAGE2AQ6NT46 116 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 FAM216BQ8N7L0 139 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 ARMS2P0C7Q2 107 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 TSC2P49815 1807 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 IGHV3-35A0A0C4DH35 117 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 COL4A5P29400 1685 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 KLRD1Q13241 179 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 PRR7Q8TB68 274 aa6.41□□□□□ -1.38
SMG1-202ENST00000446231 PRSS29PA6NIE9 313 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 FOXL2NBQ6ZUU3 175 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 CRIPAKQ8N1N5 446 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 PRR19A6NJB7 356 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 LGALS9BQ3B8N2 356 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 LGALS9CQ6DKI2 356 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 HIGD1BQ9P298 99 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 RGPD3A6NKT7 1758 aaPredicted RBP6.4□□□□□ -1.38
SMG1-202ENST00000446231 RGPD4Q7Z3J3 1758 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 MLANAQ16655 118 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 FAM214BQ7L5A3 538 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 EML5Q05BV3 1969 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 IGLV3-12A0A075B6K2 115 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 UBALD2Q8IYN6 164 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 IGHV3OR16-13A0A075B7E8 117 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 IGHV3-74A0A0B4J1X5 117 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 TMEM213A2RRL7 107 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 MYOD1P15172 320 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 IGHV3-66A0A0C4DH42 116 aa6.4□□□□□ -1.38
SMG1-202ENST00000446231 TRAV40A0A0B4J280 105 aa6.4□□□□□ -1.39
SMG1-202ENST00000446231 CECR9P0C854 216 aa6.4□□□□□ -1.39
SMG1-202ENST00000446231 SLC25A16P16260 332 aa6.4□□□□□ -1.39
SMG1-202ENST00000446231 MRPL51Q4U2R6 128 aaKnown RBP6.4□□□□□ -1.39
SMG1-202ENST00000446231 SHANK2-AS3Q9BTD1 123 aa6.4□□□□□ -1.39
SMG1-202ENST00000446231 C9orf153Q5TBE3 101 aa6.4□□□□□ -1.39
SMG1-202ENST00000446231 SSC4DQ8WTU2 575 aa6.4□□□□□ -1.39
SMG1-202ENST00000446231 C9JAW5 83 aa6.4□□□□□ -1.39
SMG1-202ENST00000446231 CDX4O14627 284 aaPredicted RBP6.4□□□□□ -1.39
SMG1-202ENST00000446231 A0A1W2PR77 199 aa6.39□□□□□ -1.39
SMG1-202ENST00000446231 C21orf140B9A014 251 aa6.39□□□□□ -1.39
SMG1-202ENST00000446231 IGHG4P01861 327 aa6.39□□□□□ -1.39
SMG1-202ENST00000446231 IGKV2-40A0A087WW87 121 aaPredicted RBP6.39□□□□□ -1.39
SMG1-202ENST00000446231 IGKV2D-40P01614 121 aaPredicted RBP6.39□□□□□ -1.39
SMG1-202ENST00000446231 Q8N8P6 123 aa6.39□□□□□ -1.39
SMG1-202ENST00000446231 VCYO14598 125 aa6.39□□□□□ -1.39
SMG1-202ENST00000446231 PRB4P10163 310 aaPredicted RBP6.39□□□□□ -1.39
SMG1-202ENST00000446231 GDF5OSQ5U4N7 250 aa6.39□□□□□ -1.39
SMG1-202ENST00000446231 PLXNA3P51805 1871 aa6.39□□□□□ -1.39
SMG1-202ENST00000446231 KMT2EQ8IZD2 1858 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms