RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 HIST1H2BLQ99880 126 aa10.67□□□□□ -0.7
RBM39-216ENST00000444878 MLST8Q9BVC4 326 aa10.67□□□□□ -0.7
RBM39-216ENST00000444878 HIF1ANQ9NWT6 349 aa10.67□□□□□ -0.7
RBM39-216ENST00000444878 RABAC1Q9UI14 185 aa10.67□□□□□ -0.7
RBM39-216ENST00000444878 USP9YO00507 2555 aaPredicted RBP10.67□□□□□ -0.7
RBM39-216ENST00000444878 CSMD2Q7Z408 3487 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 TRAV8-1A0A0A6YYK1 113 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 FRMD6-AS1P0C7T7 363 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 PAX1P15863 534 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 SIGLEC15Q6ZMC9 328 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 MBD6Q96DN6 1003 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 GRAMD2BQ96HH9 432 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 PACRGQ96M98 296 aaPredicted RBP10.66□□□□□ -0.7
RBM39-216ENST00000444878 GNB1LQ9BYB4 327 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 IGHV3-35A0A0C4DH35 117 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 BMPR1BO00238 502 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 SLC25A16P16260 332 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 RPL7P18124 248 aaKnown RBP10.66□□□□□ -0.7
RBM39-216ENST00000444878 S100A7P31151 101 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 SRSF1Q07955 248 aaKnown RBP eCLIP10.66□□□□□ -0.73e-28■■■□□ 14.6
RBM39-216ENST00000444878 PDE6HQ13956 83 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 COX19Q49B96 90 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 PYY3Q5JQD4 70 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 MS4A10Q96PG2 267 aa10.66□□□□□ -0.7
RBM39-216ENST00000444878 IZUMO1RA6ND01 250 aa10.65□□□□□ -0.7
RBM39-216ENST00000444878 K7EQM0 130 aa10.65□□□□□ -0.7
RBM39-216ENST00000444878 MT-ND6P03923 174 aa10.65□□□□□ -0.7
RBM39-216ENST00000444878 AMY1AP04745 511 aa10.65□□□□□ -0.7
RBM39-216ENST00000444878 C9orf152Q5JTZ5 239 aa10.65□□□□□ -0.7
RBM39-216ENST00000444878 MRPL54Q6P161 138 aaKnown RBP10.65□□□□□ -0.7
RBM39-216ENST00000444878 PRNTQ86SH4 94 aa10.65□□□□□ -0.7
RBM39-216ENST00000444878 Q86TA4 180 aa10.65□□□□□ -0.7
RBM39-216ENST00000444878 AAMDCQ9H7C9 122 aa10.65□□□□□ -0.7
RBM39-216ENST00000444878 GNB4Q9HAV0 340 aa10.65□□□□□ -0.7
RBM39-216ENST00000444878 NAT8BQ9UHF3 227 aa10.65□□□□□ -0.7
RBM39-216ENST00000444878 POLQO75417 2590 aa10.65□□□□□ -0.7
RBM39-216ENST00000444878 TRAV41A0A0B4J266 112 aa10.64□□□□□ -0.71
RBM39-216ENST00000444878 RAB4BP61018 213 aa10.64□□□□□ -0.71
RBM39-216ENST00000444878 LY6EQ16553 131 aa10.64□□□□□ -0.71
RBM39-216ENST00000444878 SAPCD1Q5SSQ6 148 aa10.64□□□□□ -0.71
RBM39-216ENST00000444878 EEF1AKMT3Q96AZ1 226 aa10.64□□□□□ -0.71
RBM39-216ENST00000444878 SOX21Q9Y651 276 aaPredicted RBP10.64□□□□□ -0.71
RBM39-216ENST00000444878 H3BUX3 64 aa10.64□□□□□ -0.71
RBM39-216ENST00000444878 IGLV2-11P01706 119 aa10.64□□□□□ -0.71
RBM39-216ENST00000444878 AMBPP02760 352 aa10.64□□□□□ -0.71
RBM39-216ENST00000444878 CLEC19AQ6UXS0 136 aa10.64□□□□□ -0.71
RBM39-216ENST00000444878 TSKUQ8WUA8 353 aa10.64□□□□□ -0.71
RBM39-216ENST00000444878 DAZAP1Q96EP5 407 aaKnown RBP10.64□□□□□ -0.71
RBM39-216ENST00000444878 LINC00527Q9UJ94 153 aa10.64□□□□□ -0.71
RBM39-216ENST00000444878 PTPN13Q12923 2485 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 IGHV3OR16-8A0A075B7F1 116 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 P01737 135 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 GATA3P23771 443 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 TOMM20LQ6UXN7 152 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 LINC00322Q6ZN03 302 aaPredicted RBP10.63□□□□□ -0.71
RBM39-216ENST00000444878 TMEM75Q8N9X5 138 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 NUP35Q8NFH5 326 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 CCDC140Q96MF4 163 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 NEU1Q99519 415 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 ZNF331Q9NQX6 463 aaPredicted RBP10.63□□□□□ -0.71
RBM39-216ENST00000444878 ZNF492Q9P255 531 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 TRBV7-1A0A0A6YYK4 115 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 GRIFINA4D1Z8 144 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 M0R3E3 92 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 CRISP2P16562 243 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 PSG9Q00887 426 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 TMEM136Q6ZRR5 245 aa10.63□□□□□ -0.71
RBM39-216ENST00000444878 CIARTQ8N365 385 aaPredicted RBP10.63□□□□□ -0.71
RBM39-216ENST00000444878 RPP21Q9H633 154 aaKnown RBP10.63□□□□□ -0.71
RBM39-216ENST00000444878 TRBV6-1A0A0K0K1D8 114 aa10.62□□□□□ -0.71
RBM39-216ENST00000444878 HIGD1CA8MV81 97 aa10.62□□□□□ -0.71
RBM39-216ENST00000444878 DIRC3C9JPN6 131 aa10.62□□□□□ -0.71
RBM39-216ENST00000444878 AVPP01185 164 aa10.62□□□□□ -0.71
RBM39-216ENST00000444878 HLA-DQA1P01909 254 aa10.62□□□□□ -0.71
RBM39-216ENST00000444878 CRIP2P52943 208 aaPredicted RBP10.62□□□□□ -0.71
RBM39-216ENST00000444878 ATP5G2Q06055 141 aa10.62□□□□□ -0.71
RBM39-216ENST00000444878 TMEM18Q96B42 140 aa10.62□□□□□ -0.71
RBM39-216ENST00000444878 PRSS22Q9GZN4 317 aa10.62□□□□□ -0.71
RBM39-216ENST00000444878 FBN2P35556 2912 aa10.62□□□□□ -0.71
RBM39-216ENST00000444878 A0A1B0GUS0 222 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 C19orf71A6NCJ1 209 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 A6NDX4 124 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 A8MWL6 223 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 CSN1S1P47710 185 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 PSG3Q16557 428 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 LINC01356Q8N9X3 169 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 ZFAND3Q9H8U3 227 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 PSG8Q9UQ74 426 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 H0Y8G0 127 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 M0QZK8 103 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 COL8A1P27658 744 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 C19orf54Q5BKX5 351 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 C4orf48Q5BLP8 95 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 CT83Q5H943 113 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 RASL11AQ6T310 242 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 TMEM256Q8N2U0 113 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 GBGT1Q8N5D6 347 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 ZFP30Q9Y2G7 519 aa10.61□□□□□ -0.71
RBM39-216ENST00000444878 FAM223BA6NKX1 122 aa10.6□□□□□ -0.71
RBM39-216ENST00000444878 TRGV3P03979 118 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms