RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 RASL11AQ6T310 242 aa10.19□□□□□ -0.78
CPSF4-206ENST00000441580 GBGT1Q8N5D6 347 aa10.19□□□□□ -0.78
CPSF4-206ENST00000441580 MAPK1IP1LQ8NDC0 245 aa10.19□□□□□ -0.78
CPSF4-206ENST00000441580 RPP21Q9H633 154 aaKnown RBP10.19□□□□□ -0.78
CPSF4-206ENST00000441580 TRAPPC1Q9Y5R8 145 aa10.19□□□□□ -0.78
CPSF4-206ENST00000441580 EPG5Q9HCE0 2579 aa10.19□□□□□ -0.78
CPSF4-206ENST00000441580 CLPSL1A2RUU4 121 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 IZUMO1RA6ND01 250 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 BUB3O43684 328 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 P01737 135 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 PF4V1P10720 104 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 HOXA5P20719 270 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 CDX1P47902 265 aaPredicted RBP10.18□□□□□ -0.78
CPSF4-206ENST00000441580 Q6YL49 198 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 BCL6BQ8N143 479 aaPredicted RBP10.18□□□□□ -0.78
CPSF4-206ENST00000441580 TSKUQ8WUA8 353 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 MRPL53Q96EL3 112 aaKnown RBP10.18□□□□□ -0.78
CPSF4-206ENST00000441580 DAZAP1Q96EP5 407 aaKnown RBP10.18□□□□□ -0.78
CPSF4-206ENST00000441580 NOL4LQ96MY1 436 aaPredicted RBP10.18□□□□□ -0.78
CPSF4-206ENST00000441580 PSMG3-AS1Q96PY0 264 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 NPFFR1Q9GZQ6 430 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 PRDM13Q9H4Q3 707 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 CLEC5AQ9NY25 188 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 NAT8BQ9UHF3 227 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 LINC00527Q9UJ94 153 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 FLNCQ14315 2725 aa10.18□□□□□ -0.78
CPSF4-206ENST00000441580 C19orf71A6NCJ1 209 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 IGLV2-11P01706 119 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 HLA-DQA1P01909 254 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 BLCAPP62952 87 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 SMUG1Q53HV7 270 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 COA6Q5JTJ3 125 aaKnown RBP10.17□□□□□ -0.78
CPSF4-206ENST00000441580 ATP5L2Q7Z4Y8 100 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 PRNTQ86SH4 94 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 CIARTQ8N365 385 aaPredicted RBP10.17□□□□□ -0.78
CPSF4-206ENST00000441580 NUDT10Q8NFP7 164 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 NUDT11Q96G61 164 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 C17orf77Q96MU5 243 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 GNB1LQ9BYB4 327 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 GFRA4Q9GZZ7 299 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 ZNF331Q9NQX6 463 aaPredicted RBP10.17□□□□□ -0.78
CPSF4-206ENST00000441580 PSG8Q9UQ74 426 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 U3KQE9 123 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 LRRK2Q5S007 2527 aa10.17□□□□□ -0.78
CPSF4-206ENST00000441580 ANKRD17O75179 2603 aaKnown RBP10.16□□□□□ -0.78
CPSF4-206ENST00000441580 IGHV3-35A0A0C4DH35 117 aa10.16□□□□□ -0.78
CPSF4-206ENST00000441580 FAM231BA6NCW3 169 aa10.16□□□□□ -0.78
CPSF4-206ENST00000441580 ZNF785A8K8V0 405 aa10.16□□□□□ -0.78
CPSF4-206ENST00000441580 NPIPB6E9PJ23 425 aa10.16□□□□□ -0.78
CPSF4-206ENST00000441580 IGHG4P01861 327 aa10.16□□□□□ -0.78
CPSF4-206ENST00000441580 CT45A10P0DMU9 189 aa10.16□□□□□ -0.78
CPSF4-206ENST00000441580 S100A2P29034 98 aa10.16□□□□□ -0.78
CPSF4-206ENST00000441580 SLC35B1P78383 322 aa10.16□□□□□ -0.78
CPSF4-206ENST00000441580 WIPF2Q8TF74 440 aaPredicted RBP10.16□□□□□ -0.78
CPSF4-206ENST00000441580 PRSS22Q9GZN4 317 aa10.16□□□□□ -0.78
CPSF4-206ENST00000441580 TRAV8-1A0A0A6YYK1 113 aa10.15□□□□□ -0.78
CPSF4-206ENST00000441580 XKRY2A2RUG3 117 aa10.15□□□□□ -0.78
CPSF4-206ENST00000441580 RBAKDNA6NC62 111 aa10.15□□□□□ -0.78
CPSF4-206ENST00000441580 A8MWL6 223 aa10.15□□□□□ -0.78
CPSF4-206ENST00000441580 SNURFLB1AK76 121 aa10.15□□□□□ -0.78
CPSF4-206ENST00000441580 CHEK1O14757 476 aa10.15□□□□□ -0.78
CPSF4-206ENST00000441580 TCL1AP56279 114 aa10.15□□□□□ -0.78
CPSF4-206ENST00000441580 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.15□□□□□ -0.78
CPSF4-206ENST00000441580 LINC00518Q8N0U6 118 aa10.15□□□□□ -0.78
CPSF4-206ENST00000441580 TMEM86BQ8N661 226 aa10.15□□□□□ -0.78
CPSF4-206ENST00000441580 NDFIP1Q9BT67 221 aa10.15□□□□□ -0.78
CPSF4-206ENST00000441580 ABCA1O95477 2261 aa10.15□□□□□ -0.78
CPSF4-206ENST00000441580 SPG11Q96JI7 2443 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 IGHV3OR16-8A0A075B7F1 116 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 A0A1W2PS18 150 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 M0R3E3 92 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 CBLN1P23435 193 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 PSMB8P28062 276 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 BMI1P35226 326 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 SAPCD1Q5SSQ6 148 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 HIST3H2BBQ8N257 126 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 OR4X2Q8NGF9 303 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 SGK494Q96LW2 274 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 NEU1Q99519 415 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 MRPL18Q9H0U6 180 aaKnown RBP10.14□□□□□ -0.79
CPSF4-206ENST00000441580 SMAD5-AS1Q9Y6J3 95 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 COL12A1Q99715 3063 aa10.14□□□□□ -0.79
CPSF4-206ENST00000441580 FOXE3Q13461 319 aa10.13□□□□□ -0.79
CPSF4-206ENST00000441580 SAMD13Q5VXD3 122 aa10.13□□□□□ -0.79
CPSF4-206ENST00000441580 Q6AWC8 147 aa10.13□□□□□ -0.79
CPSF4-206ENST00000441580 C16orf54Q6UWD8 224 aa10.13□□□□□ -0.79
CPSF4-206ENST00000441580 COX8CQ7Z4L0 72 aa10.13□□□□□ -0.79
CPSF4-206ENST00000441580 GLMPQ8WWB7 406 aa10.13□□□□□ -0.79
CPSF4-206ENST00000441580 FOXC2Q99958 501 aa10.13□□□□□ -0.79
CPSF4-206ENST00000441580 HIGD1CA8MV81 97 aa10.12□□□□□ -0.79
CPSF4-206ENST00000441580 CA1P00915 261 aaPredicted RBP10.12□□□□□ -0.79
CPSF4-206ENST00000441580 IGHV3-11P01762 117 aa10.12□□□□□ -0.79
CPSF4-206ENST00000441580 ELANEP08246 267 aa10.12□□□□□ -0.79
CPSF4-206ENST00000441580 TMEM95Q3KNT9 176 aa10.12□□□□□ -0.79
CPSF4-206ENST00000441580 MRPL54Q6P161 138 aaKnown RBP10.12□□□□□ -0.79
CPSF4-206ENST00000441580 TMEM136Q6ZRR5 245 aa10.12□□□□□ -0.79
CPSF4-206ENST00000441580 Q6ZS46 218 aa10.12□□□□□ -0.79
CPSF4-206ENST00000441580 NUP35Q8NFH5 326 aa10.12□□□□□ -0.79
CPSF4-206ENST00000441580 ZC2HC1AQ96GY0 325 aa10.12□□□□□ -0.79
CPSF4-206ENST00000441580 KLK15Q9H2R5 256 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms