RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 RNF24Q9Y225 148 aa9.78□□□□□ -0.84
PTPRN-205ENST00000440552 FLG2Q5D862 2391 aaPredicted RBP9.78□□□□□ -0.84
PTPRN-205ENST00000440552 WRBO00258 174 aa9.77□□□□□ -0.85
PTPRN-205ENST00000440552 IL5P05113 134 aa9.77□□□□□ -0.85
PTPRN-205ENST00000440552 INAFM2P0DMQ5 153 aa9.77□□□□□ -0.85
PTPRN-205ENST00000440552 HOXA5P20719 270 aa9.77□□□□□ -0.85
PTPRN-205ENST00000440552 SELENOTP62341 195 aa9.77□□□□□ -0.85
PTPRN-205ENST00000440552 TMEM128Q5BJH2 165 aa9.77□□□□□ -0.85
PTPRN-205ENST00000440552 Q6ZRN7 208 aaPredicted RBP9.77□□□□□ -0.85
PTPRN-205ENST00000440552 ACOT7LQ6ZUV0 252 aa9.77□□□□□ -0.85
PTPRN-205ENST00000440552 RPUSD4Q96CM3 377 aaKnown RBP9.77□□□□□ -0.85
PTPRN-205ENST00000440552 ZNF586Q9NXT0 402 aa9.77□□□□□ -0.85
PTPRN-205ENST00000440552 RSL24D1Q9UHA3 163 aaKnown RBP9.77□□□□□ -0.85
PTPRN-205ENST00000440552 VPS13BQ7Z7G8 4022 aa9.77□□□□□ -0.85
PTPRN-205ENST00000440552 A0A0J9YY99 117 aa9.76□□□□□ -0.85
PTPRN-205ENST00000440552 CXCL2P19875 107 aa9.76□□□□□ -0.85
PTPRN-205ENST00000440552 C4orf46Q504U0 113 aa9.76□□□□□ -0.85
PTPRN-205ENST00000440552 SPANXN5Q5MJ07 72 aa9.76□□□□□ -0.85
PTPRN-205ENST00000440552 CCDC28AQ8IWP9 274 aa9.76□□□□□ -0.85
PTPRN-205ENST00000440552 LYPD1Q8N2G4 141 aa9.76□□□□□ -0.85
PTPRN-205ENST00000440552 LRRC20Q8TCA0 184 aa9.76□□□□□ -0.85
PTPRN-205ENST00000440552 STRAPQ9Y3F4 350 aaKnown RBP9.76□□□□□ -0.85
PTPRN-205ENST00000440552 MRPS12O15235 138 aaKnown RBP9.75□□□□□ -0.85
PTPRN-205ENST00000440552 RLN2P04090 185 aa9.75□□□□□ -0.85
PTPRN-205ENST00000440552 LINC00869P0C866 280 aa9.75□□□□□ -0.85
PTPRN-205ENST00000440552 LINC00315P59091 139 aa9.75□□□□□ -0.85
PTPRN-205ENST00000440552 DLK1P80370 383 aa9.75□□□□□ -0.85
PTPRN-205ENST00000440552 CDPF1Q6NVV7 123 aa9.75□□□□□ -0.85
PTPRN-205ENST00000440552 PTTG2Q9NZH5 202 aa9.75□□□□□ -0.85
PTPRN-205ENST00000440552 GAGE12BA1L429 117 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 K7EPK0 472 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 GAGE7O76087 117 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 OR5G3P0C626 314 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 GAGE12FP0CL80 117 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 GAGE12GP0CL81 117 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 GAGE12IP0CL82 117 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 SMIM18P0DKX4 95 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 FAUP35544 74 aaKnown RBP9.74□□□□□ -0.85
PTPRN-205ENST00000440552 DAZ2Q13117 558 aaKnown RBP9.74□□□□□ -0.85
PTPRN-205ENST00000440552 GFI1BQ5VTD9 330 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 LCN15Q6UWW0 184 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 TMED4Q7Z7H5 227 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 SOSTQ9BQB4 213 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 SLC50A1Q9BRV3 221 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 ZNF331Q9NQX6 463 aaPredicted RBP9.74□□□□□ -0.85
PTPRN-205ENST00000440552 MYCBP2O75592 4640 aa9.74□□□□□ -0.85
PTPRN-205ENST00000440552 A0A096LPF7 62 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 PMS2P5A8MQ11 134 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 SNURFLB1AK76 121 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 H3BP45 60 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 EREGO14944 169 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 SFT2D2O95562 160 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 VAMP1P23763 118 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 XGP55808 180 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 KIR3DS1Q14943 382 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 SPCS2Q15005 226 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 PXDC1Q5TGL8 231 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 PATE2Q6UY27 113 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 VSIG2Q96IQ7 327 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 C18orf15Q96N68 181 aa9.73□□□□□ -0.85
PTPRN-205ENST00000440552 CCDC59Q9P031 241 aaKnown RBP9.73□□□□□ -0.85
PTPRN-205ENST00000440552 SMCO3A2RU48 225 aa9.72□□□□□ -0.85
PTPRN-205ENST00000440552 FNDC10F2Z333 226 aa9.72□□□□□ -0.85
PTPRN-205ENST00000440552 ANXA7P20073 488 aaKnown RBP9.72□□□□□ -0.85
PTPRN-205ENST00000440552 ID3Q02535 119 aa9.72□□□□□ -0.85
PTPRN-205ENST00000440552 CCDC190Q86UF4 302 aa9.72□□□□□ -0.85
PTPRN-205ENST00000440552 ODF3Q96PU9 254 aa9.72□□□□□ -0.85
PTPRN-205ENST00000440552 SLC25A21Q9BQT8 299 aaPredicted RBP9.72□□□□□ -0.85
PTPRN-205ENST00000440552 ARV1Q9H2C2 271 aa9.72□□□□□ -0.85
PTPRN-205ENST00000440552 TMPRSS5Q9H3S3 457 aa9.72□□□□□ -0.85
PTPRN-205ENST00000440552 SRRM2Q9UQ35 2752 aaKnown RBP9.71□□□□□ -0.85
PTPRN-205ENST00000440552 SIVA1O15304 175 aa9.71□□□□□ -0.86
PTPRN-205ENST00000440552 HOXB5P09067 269 aa9.71□□□□□ -0.86
PTPRN-205ENST00000440552 ERVFC1-1P60608 527 aa9.71□□□□□ -0.86
PTPRN-205ENST00000440552 DYNC2LI1Q8TCX1 351 aa9.71□□□□□ -0.86
PTPRN-205ENST00000440552 FRZBQ92765 325 aa9.71□□□□□ -0.86
PTPRN-205ENST00000440552 PYGO2Q9BRQ0 406 aa9.71□□□□□ -0.86
PTPRN-205ENST00000440552 ARL6Q9H0F7 186 aa9.71□□□□□ -0.86
PTPRN-205ENST00000440552 NPVFQ9HCQ7 196 aa9.71□□□□□ -0.86
PTPRN-205ENST00000440552 FABP12A6NFH5 140 aa9.7□□□□□ -0.86
PTPRN-205ENST00000440552 PRAC2D3DTV9 90 aa9.7□□□□□ -0.86
PTPRN-205ENST00000440552 PRB4P10163 310 aaPredicted RBP9.7□□□□□ -0.86
PTPRN-205ENST00000440552 AP3S2P59780 193 aa9.7□□□□□ -0.86
PTPRN-205ENST00000440552 PPP1R1AQ13522 171 aa9.7□□□□□ -0.86
PTPRN-205ENST00000440552 Q5VSD8 79 aa9.7□□□□□ -0.86
PTPRN-205ENST00000440552 Q6ZTI0 123 aa9.7□□□□□ -0.86
PTPRN-205ENST00000440552 SMIM8Q96KF7 97 aa9.7□□□□□ -0.86
PTPRN-205ENST00000440552 PARD6GQ9BYG4 376 aaPredicted RBP9.7□□□□□ -0.86
PTPRN-205ENST00000440552 PSENENQ9NZ42 101 aa9.7□□□□□ -0.86
PTPRN-205ENST00000440552 PXMP4Q9Y6I8 212 aa9.7□□□□□ -0.86
PTPRN-205ENST00000440552 LEPP41159 167 aa9.69□□□□□ -0.86
PTPRN-205ENST00000440552 POLR2GP62487 172 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTPRN-205ENST00000440552 TEPPQ6URK8 271 aa9.69□□□□□ -0.86
PTPRN-205ENST00000440552 TMEM14EPQ6UXP3 125 aa9.69□□□□□ -0.86
PTPRN-205ENST00000440552 NFE4Q86UQ8 179 aa9.69□□□□□ -0.86
PTPRN-205ENST00000440552 BPIFA4PQ86YQ2 179 aa9.69□□□□□ -0.86
PTPRN-205ENST00000440552 ZBTB8BQ8NAP8 495 aaPredicted RBP9.69□□□□□ -0.86
PTPRN-205ENST00000440552 DEDD2Q8WXF8 326 aa9.69□□□□□ -0.86
PTPRN-205ENST00000440552 TRIM63Q969Q1 353 aa9.69□□□□□ -0.86
PTPRN-205ENST00000440552 TNFSF8P32971 234 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms