RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 MYCBP2O75592 4640 aa14.15□□□□□ -0.14
TRIM39-210ENST00000440271 EREGO14944 169 aa14.14□□□□□ -0.15
TRIM39-210ENST00000440271 RGS5O15539 181 aa14.14□□□□□ -0.15
TRIM39-210ENST00000440271 MED6O75586 246 aa14.14□□□□□ -0.15
TRIM39-210ENST00000440271 RAP2BP61225 183 aa14.14□□□□□ -0.15
TRIM39-210ENST00000440271 KIR3DS1Q14943 382 aa14.14□□□□□ -0.15
TRIM39-210ENST00000440271 CIB3Q96Q77 187 aaPredicted RBP14.14□□□□□ -0.15
TRIM39-210ENST00000440271 C20orf144Q9BQM9 153 aa14.14□□□□□ -0.15
TRIM39-210ENST00000440271 HIGD1AQ9Y241 93 aa14.14□□□□□ -0.15
TRIM39-210ENST00000440271 A0A087X0K7 114 aa14.13□□□□□ -0.15
TRIM39-210ENST00000440271 CTDSP2O14595 271 aa14.13□□□□□ -0.15
TRIM39-210ENST00000440271 ERVFC1-1P60608 527 aa14.13□□□□□ -0.15
TRIM39-210ENST00000440271 FLG2Q5D862 2391 aaPredicted RBP14.13□□□□□ -0.15
TRIM39-210ENST00000440271 A0A096LPF7 62 aa14.12□□□□□ -0.15
TRIM39-210ENST00000440271 PIGBOS1A0A0B4J2F0 54 aa14.12□□□□□ -0.15
TRIM39-210ENST00000440271 DUXBA0A1W2PPF3 345 aa14.12□□□□□ -0.15
TRIM39-210ENST00000440271 ANKRD20A5PA0PJZ0 165 aa14.12□□□□□ -0.15
TRIM39-210ENST00000440271 WRBO00258 174 aa14.12□□□□□ -0.15
TRIM39-210ENST00000440271 CTDSPLO15194 276 aa14.12□□□□□ -0.15
TRIM39-210ENST00000440271 HYPMO75409 117 aa14.12□□□□□ -0.15
TRIM39-210ENST00000440271 IL5P05113 134 aa14.12□□□□□ -0.15
TRIM39-210ENST00000440271 SLC25A6P12236 298 aa14.12□□□□□ -0.15
TRIM39-210ENST00000440271 CYP2G1PQ6ZSU1 146 aa14.12□□□□□ -0.15
TRIM39-210ENST00000440271 VSIG2Q96IQ7 327 aa14.12□□□□□ -0.15
TRIM39-210ENST00000440271 SNURFLB1AK76 121 aa14.11□□□□□ -0.15
TRIM39-210ENST00000440271 SIVA1O15304 175 aa14.11□□□□□ -0.15
TRIM39-210ENST00000440271 SYNGR2O43760 224 aa14.11□□□□□ -0.15
TRIM39-210ENST00000440271 OR5G3P0C626 314 aa14.11□□□□□ -0.15
TRIM39-210ENST00000440271 KRTAP10-1P60331 282 aa14.11□□□□□ -0.15
TRIM39-210ENST00000440271 SPANXN5Q5MJ07 72 aa14.11□□□□□ -0.15
TRIM39-210ENST00000440271 ACOT7LQ6ZUV0 252 aa14.11□□□□□ -0.15
TRIM39-210ENST00000440271 PARD6GQ9BYG4 376 aaPredicted RBP14.11□□□□□ -0.15
TRIM39-210ENST00000440271 TMPRSS5Q9H3S3 457 aa14.11□□□□□ -0.15
TRIM39-210ENST00000440271 MCUBQ9NWR8 336 aa14.11□□□□□ -0.15
TRIM39-210ENST00000440271 VPS13BQ7Z7G8 4022 aa14.11□□□□□ -0.15
TRIM39-210ENST00000440271 SRRM2Q9UQ35 2752 aaKnown RBP14.1□□□□□ -0.15
TRIM39-210ENST00000440271 IFNA5P01569 189 aa14.1□□□□□ -0.15
TRIM39-210ENST00000440271 PLP1P60201 277 aa14.1□□□□□ -0.15
TRIM39-210ENST00000440271 IL18Q14116 193 aa14.1□□□□□ -0.15
TRIM39-210ENST00000440271 GFI1BQ5VTD9 330 aa14.1□□□□□ -0.15
TRIM39-210ENST00000440271 TNFRSF18Q9Y5U5 241 aa14.1□□□□□ -0.15
TRIM39-210ENST00000440271 SMR3BP02814 79 aaPredicted RBP14.09□□□□□ -0.15
TRIM39-210ENST00000440271 LINC00869P0C866 280 aa14.09□□□□□ -0.15
TRIM39-210ENST00000440271 MDFICQ9P1T7 246 aa14.09□□□□□ -0.15
TRIM39-210ENST00000440271 SMCO3A2RU48 225 aa14.08□□□□□ -0.16
TRIM39-210ENST00000440271 PMS2P5A8MQ11 134 aa14.08□□□□□ -0.16
TRIM39-210ENST00000440271 MRPS12O15235 138 aaKnown RBP14.08□□□□□ -0.16
TRIM39-210ENST00000440271 Q6ZTI0 123 aa14.08□□□□□ -0.16
TRIM39-210ENST00000440271 LRTM2Q8N967 370 aa14.08□□□□□ -0.16
TRIM39-210ENST00000440271 DIRAS2Q96HU8 199 aa14.08□□□□□ -0.16
TRIM39-210ENST00000440271 STRAPQ9Y3F4 350 aaKnown RBP14.08□□□□□ -0.16
TRIM39-210ENST00000440271 H3BP45 60 aa14.07□□□□□ -0.16
TRIM39-210ENST00000440271 ANXA7P20073 488 aaKnown RBP14.07□□□□□ -0.16
TRIM39-210ENST00000440271 DAZ2Q13117 558 aaKnown RBP14.07□□□□□ -0.16
TRIM39-210ENST00000440271 TMEM128Q5BJH2 165 aa14.07□□□□□ -0.16
TRIM39-210ENST00000440271 S100A7AQ86SG5 101 aa14.07□□□□□ -0.16
TRIM39-210ENST00000440271 CCDC190Q86UF4 302 aa14.07□□□□□ -0.16
TRIM39-210ENST00000440271 ZNF331Q9NQX6 463 aaPredicted RBP14.07□□□□□ -0.16
TRIM39-210ENST00000440271 RABL2AQ9UBK7 228 aaPredicted RBP14.07□□□□□ -0.16
TRIM39-210ENST00000440271 RABL2BQ9UNT1 228 aa14.07□□□□□ -0.16
TRIM39-210ENST00000440271 A0A087WTM6 91 aa14.06□□□□□ -0.16
TRIM39-210ENST00000440271 DNAH10OSP0CZ25 163 aa14.06□□□□□ -0.16
TRIM39-210ENST00000440271 CXCL2P19875 107 aa14.06□□□□□ -0.16
TRIM39-210ENST00000440271 SELENOTP62341 195 aa14.06□□□□□ -0.16
TRIM39-210ENST00000440271 ICAM4Q14773 271 aa14.06□□□□□ -0.16
TRIM39-210ENST00000440271 PATE2Q6UY27 113 aa14.06□□□□□ -0.16
TRIM39-210ENST00000440271 TMED4Q7Z7H5 227 aa14.06□□□□□ -0.16
TRIM39-210ENST00000440271 C18orf15Q96N68 181 aa14.06□□□□□ -0.16
TRIM39-210ENST00000440271 PRAC2D3DTV9 90 aa14.05□□□□□ -0.16
TRIM39-210ENST00000440271 J3KRW8 73 aa14.05□□□□□ -0.16
TRIM39-210ENST00000440271 NXPH4O95158 308 aa14.05□□□□□ -0.16
TRIM39-210ENST00000440271 SNRPCP09234 159 aaKnown RBP14.05□□□□□ -0.16
TRIM39-210ENST00000440271 LCN15Q6UWW0 184 aa14.05□□□□□ -0.16
TRIM39-210ENST00000440271 SLC50A1Q9BRV3 221 aa14.05□□□□□ -0.16
TRIM39-210ENST00000440271 ARL6Q9H0F7 186 aa14.05□□□□□ -0.16
TRIM39-210ENST00000440271 TRGV2A0A075B6R0 118 aa14.04□□□□□ -0.16
TRIM39-210ENST00000440271 TRAV12-3A0A0B4J271 114 aa14.04□□□□□ -0.16
TRIM39-210ENST00000440271 VAMP1P23763 118 aa14.04□□□□□ -0.16
TRIM39-210ENST00000440271 NFE4Q86UQ8 179 aa14.04□□□□□ -0.16
TRIM39-210ENST00000440271 ARV1Q9H2C2 271 aa14.04□□□□□ -0.16
TRIM39-210ENST00000440271 RNF24Q9Y225 148 aa14.04□□□□□ -0.16
TRIM39-210ENST00000440271 FAM229AH3BQW9 127 aa14.03□□□□□ -0.16
TRIM39-210ENST00000440271 HOXB5P09067 269 aa14.03□□□□□ -0.16
TRIM39-210ENST00000440271 PYGO2Q9BRQ0 406 aa14.03□□□□□ -0.16
TRIM39-210ENST00000440271 CT45A10P0DMU9 189 aa14.02□□□□□ -0.17
TRIM39-210ENST00000440271 ZNF431Q8TF32 576 aaPredicted RBP14.02□□□□□ -0.17
TRIM39-210ENST00000440271 RSL24D1Q9UHA3 163 aaKnown RBP14.02□□□□□ -0.17
TRIM39-210ENST00000440271 LINC00854A0A1B0GVQ3 168 aa14.01□□□□□ -0.17
TRIM39-210ENST00000440271 GCSHP23434 173 aa14.01□□□□□ -0.17
TRIM39-210ENST00000440271 LEPP41159 167 aa14.01□□□□□ -0.17
TRIM39-210ENST00000440271 SPCS2Q15005 226 aa14.01□□□□□ -0.17
TRIM39-210ENST00000440271 ZBTB8BQ8NAP8 495 aaPredicted RBP14.01□□□□□ -0.17
TRIM39-210ENST00000440271 GSN-AS1Q9NRJ2 163 aa14.01□□□□□ -0.17
TRIM39-210ENST00000440271 ICOSQ9Y6W8 199 aa14.01□□□□□ -0.17
TRIM39-210ENST00000440271 H3BTX0 84 aa14□□□□□ -0.17
TRIM39-210ENST00000440271 K7EPK0 472 aa14□□□□□ -0.17
TRIM39-210ENST00000440271 SLC17A3O00476 420 aa14□□□□□ -0.17
TRIM39-210ENST00000440271 ZNF324O75467 553 aaPredicted RBP14□□□□□ -0.17
TRIM39-210ENST00000440271 SFT2D2O95562 160 aa14□□□□□ -0.17
TRIM39-210ENST00000440271 RRAS2P62070 204 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms