RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PRSS22Q9GZN4 317 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 ZFP30Q9Y2G7 519 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 SMAD5-AS1Q9Y6J3 95 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 COL12A1Q99715 3063 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 EPG5Q9HCE0 2579 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 TRAV8-1A0A0A6YYK1 113 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 MT-ND6P03923 174 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 CBLN1P23435 193 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 IER3P46695 156 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 PRRC2AP48634 2157 aaKnown RBP9.1□□□□□ -0.95
SMAD3-202ENST00000439724 CFHR3Q02985 330 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 PSG3Q16557 428 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 GFI1BQ5VTD9 330 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 PRNTQ86SH4 94 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 KRTAP1-3Q8IUG1 177 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 OR5R1Q8NH85 324 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 TSKUQ8WUA8 353 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 NOL4LQ96MY1 436 aaPredicted RBP9.1□□□□□ -0.95
SMAD3-202ENST00000439724 C12orf57Q99622 126 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 U3KQE9 123 aa9.1□□□□□ -0.95
SMAD3-202ENST00000439724 IGHV3OR16-8A0A075B7F1 116 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.09□□□□□ -0.95
SMAD3-202ENST00000439724 XKRY2A2RUG3 117 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 FBLL1A6NHQ2 334 aaKnown RBP9.09□□□□□ -0.95
SMAD3-202ENST00000439724 NPIPB6E9PJ23 425 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 M0R3E3 92 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 CA1P00915 261 aaPredicted RBP9.09□□□□□ -0.95
SMAD3-202ENST00000439724 IGLV1-40P01703 118 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 IGHV4-59P01825 116 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 PLA2G2AP14555 144 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 CSN1S1P47710 185 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 TCL1AP56279 114 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 RASL11AQ6T310 242 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 LINC00322Q6ZN03 302 aaPredicted RBP9.09□□□□□ -0.95
SMAD3-202ENST00000439724 OR4B1Q8NGF8 309 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 METTL26Q96S19 204 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 MRPL18Q9H0U6 180 aaKnown RBP9.09□□□□□ -0.95
SMAD3-202ENST00000439724 RPP21Q9H633 154 aaKnown RBP9.09□□□□□ -0.95
SMAD3-202ENST00000439724 PSG8Q9UQ74 426 aa9.09□□□□□ -0.95
SMAD3-202ENST00000439724 LRRK2Q5S007 2527 aa9.09□□□□□ -0.96
SMAD3-202ENST00000439724 ANKRD17O75179 2603 aaKnown RBP9.08□□□□□ -0.96
SMAD3-202ENST00000439724 SNURFLB1AK76 121 aa9.08□□□□□ -0.96
SMAD3-202ENST00000439724 P01737 135 aa9.08□□□□□ -0.96
SMAD3-202ENST00000439724 S100A2P29034 98 aa9.08□□□□□ -0.96
SMAD3-202ENST00000439724 ARL3P36405 182 aa9.08□□□□□ -0.96
SMAD3-202ENST00000439724 C16orf54Q6UWD8 224 aa9.08□□□□□ -0.96
SMAD3-202ENST00000439724 Q6ZS46 218 aa9.08□□□□□ -0.96
SMAD3-202ENST00000439724 GBGT1Q8N5D6 347 aa9.08□□□□□ -0.96
SMAD3-202ENST00000439724 WIPF2Q8TF74 440 aaPredicted RBP9.08□□□□□ -0.96
SMAD3-202ENST00000439724 Q96MF0 132 aa9.08□□□□□ -0.96
SMAD3-202ENST00000439724 GPR61Q9BZJ8 451 aa9.08□□□□□ -0.96
SMAD3-202ENST00000439724 ZNF331Q9NQX6 463 aaPredicted RBP9.08□□□□□ -0.96
SMAD3-202ENST00000439724 NAT8BQ9UHF3 227 aa9.08□□□□□ -0.96
SMAD3-202ENST00000439724 A8MWL6 223 aa9.07□□□□□ -0.96
SMAD3-202ENST00000439724 J3QKU1 62 aa9.07□□□□□ -0.96
SMAD3-202ENST00000439724 HLA-DQA1P01909 254 aa9.07□□□□□ -0.96
SMAD3-202ENST00000439724 FRMD6-AS1P0C7T7 363 aa9.07□□□□□ -0.96
SMAD3-202ENST00000439724 TMEM136Q6ZRR5 245 aa9.07□□□□□ -0.96
SMAD3-202ENST00000439724 CIARTQ8N365 385 aaPredicted RBP9.07□□□□□ -0.96
SMAD3-202ENST00000439724 NUP35Q8NFH5 326 aa9.07□□□□□ -0.96
SMAD3-202ENST00000439724 DAZAP1Q96EP5 407 aaKnown RBP9.07□□□□□ -0.96
SMAD3-202ENST00000439724 NEU1Q99519 415 aa9.07□□□□□ -0.96
SMAD3-202ENST00000439724 SLC50A1Q9BRV3 221 aa9.07□□□□□ -0.96
SMAD3-202ENST00000439724 GFRA4Q9GZZ7 299 aa9.07□□□□□ -0.96
SMAD3-202ENST00000439724 A0A0G2JLM5 398 aa9.06□□□□□ -0.96
SMAD3-202ENST00000439724 FAM231BA6NCW3 169 aa9.06□□□□□ -0.96
SMAD3-202ENST00000439724 ZNF785A8K8V0 405 aa9.06□□□□□ -0.96
SMAD3-202ENST00000439724 NDUFA4O00483 81 aa9.06□□□□□ -0.96
SMAD3-202ENST00000439724 CHEK1O14757 476 aa9.06□□□□□ -0.96
SMAD3-202ENST00000439724 PF4V1P10720 104 aa9.06□□□□□ -0.96
SMAD3-202ENST00000439724 CYB5R2Q6BCY4 276 aa9.06□□□□□ -0.96
SMAD3-202ENST00000439724 MRPL54Q6P161 138 aaKnown RBP9.06□□□□□ -0.96
SMAD3-202ENST00000439724 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.06□□□□□ -0.96
SMAD3-202ENST00000439724 Q6YL49 198 aa9.06□□□□□ -0.96
SMAD3-202ENST00000439724 VPREB3Q9UKI3 123 aa9.06□□□□□ -0.96
SMAD3-202ENST00000439724 TMEM89A2RUT3 159 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 HIGD1CA8MV81 97 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 SPINK4O60575 86 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 TRBV12-3P01733 135 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 IGHG4P01861 327 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 SLC35B1P78383 322 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 PDZD11Q5EBL8 140 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 COX8CQ7Z4L0 72 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 ATP5L2Q7Z4Y8 100 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 ZC2HC1AQ96GY0 325 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 HIST1H2BLQ99880 126 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 KLK15Q9H2R5 256 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 PRDM13Q9H4Q3 707 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 APOHP02749 345 aaPredicted RBP9.05□□□□□ -0.96
SMAD3-202ENST00000439724 FAM209BQ5JX69 171 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 Q71RC1 249 aaPredicted RBP9.05□□□□□ -0.96
SMAD3-202ENST00000439724 OR10D4PQ8NGN7 298 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 MRPL53Q96EL3 112 aaKnown RBP9.05□□□□□ -0.96
SMAD3-202ENST00000439724 PSMG3-AS1Q96PY0 264 aa9.05□□□□□ -0.96
SMAD3-202ENST00000439724 PTPN13Q12923 2485 aa9.04□□□□□ -0.96
SMAD3-202ENST00000439724 FBN2P35556 2912 aa9.04□□□□□ -0.96
SMAD3-202ENST00000439724 IGKV2-40A0A087WW87 121 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-202ENST00000439724 A0A1B0GXF2 115 aa9.04□□□□□ -0.96
SMAD3-202ENST00000439724 RBAKDNA6NC62 111 aa9.04□□□□□ -0.96
SMAD3-202ENST00000439724 ZNF207O43670 478 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 1179.2 ms