RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 PSG9Q00887 426 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 GOLT1AQ6ZVE7 132 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 Q86TA4 180 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 ARL6IP6Q8N6S5 226 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 MAPK1IP1LQ8NDC0 245 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 SGK494Q96LW2 274 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 MS4A10Q96PG2 267 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 GNB1LQ9BYB4 327 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 GPR61Q9BZJ8 451 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 HECTD1Q9ULT8 2610 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 H3BUA1 57 aa19.94■□□□□ 0.78
CPNE1-216ENST00000437340 IGLV2-11P01706 119 aa19.94■□□□□ 0.78
CPNE1-216ENST00000437340 PRSS57Q6UWY2 283 aa19.94■□□□□ 0.78
CPNE1-216ENST00000437340 CLEC19AQ6UXS0 136 aa19.94■□□□□ 0.78
CPNE1-216ENST00000437340 Q96MF0 132 aa19.94■□□□□ 0.78
CPNE1-216ENST00000437340 AAMDCQ9H7C9 122 aa19.94■□□□□ 0.78
CPNE1-216ENST00000437340 C9orf152Q5JTZ5 239 aa19.93■□□□□ 0.78
CPNE1-216ENST00000437340 PRR27Q6MZM9 219 aa19.93■□□□□ 0.78
CPNE1-216ENST00000437340 WDR73Q6P4I2 378 aa19.93■□□□□ 0.78
CPNE1-216ENST00000437340 ITPR2Q14571 2701 aa19.93■□□□□ 0.78
CPNE1-216ENST00000437340 IZUMO1RA6ND01 250 aa19.93■□□□□ 0.78
CPNE1-216ENST00000437340 ZNF253O75346 499 aa19.93■□□□□ 0.78
CPNE1-216ENST00000437340 MT-ND6P03923 174 aa19.93■□□□□ 0.78
CPNE1-216ENST00000437340 SERTM2A0A1B0GWG4 89 aa19.92■□□□□ 0.78
CPNE1-216ENST00000437340 CBLN1P23435 193 aa19.92■□□□□ 0.78
CPNE1-216ENST00000437340 RELQ04864 619 aaPredicted RBP19.92■□□□□ 0.78
CPNE1-216ENST00000437340 CT83Q5H943 113 aa19.92■□□□□ 0.78
CPNE1-216ENST00000437340 TSKUQ8WUA8 353 aa19.92■□□□□ 0.78
CPNE1-216ENST00000437340 PRSS22Q9GZN4 317 aa19.92■□□□□ 0.78
CPNE1-216ENST00000437340 PRRC2AP48634 2157 aaKnown RBP19.91■□□□□ 0.78
CPNE1-216ENST00000437340 C19orf71A6NCJ1 209 aa19.91■□□□□ 0.78
CPNE1-216ENST00000437340 IER3P46695 156 aa19.91■□□□□ 0.78
CPNE1-216ENST00000437340 GNB4Q9HAV0 340 aa19.91■□□□□ 0.78
CPNE1-216ENST00000437340 ZFP30Q9Y2G7 519 aa19.91■□□□□ 0.78
CPNE1-216ENST00000437340 DIRC3C9JPN6 131 aa19.9■□□□□ 0.78
CPNE1-216ENST00000437340 TCL1AP56279 114 aa19.9■□□□□ 0.78
CPNE1-216ENST00000437340 MRPL18Q9H0U6 180 aaKnown RBP19.9■□□□□ 0.78
CPNE1-216ENST00000437340 TRAV8-1A0A0A6YYK1 113 aa19.9■□□□□ 0.78
CPNE1-216ENST00000437340 CA1P00915 261 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-216ENST00000437340 TGFAP01135 160 aa19.9■□□□□ 0.78
CPNE1-216ENST00000437340 TRGV3P03979 118 aa19.9■□□□□ 0.78
CPNE1-216ENST00000437340 PPIFP30405 207 aaKnown RBP19.9■□□□□ 0.78
CPNE1-216ENST00000437340 RASL11AQ6T310 242 aa19.9■□□□□ 0.78
CPNE1-216ENST00000437340 NAT8BQ9UHF3 227 aa19.9■□□□□ 0.78
CPNE1-216ENST00000437340 SNURFLB1AK76 121 aa19.89■□□□□ 0.77
CPNE1-216ENST00000437340 PSG3Q16557 428 aa19.89■□□□□ 0.77
CPNE1-216ENST00000437340 PDZD11Q5EBL8 140 aa19.89■□□□□ 0.77
CPNE1-216ENST00000437340 PRNTQ86SH4 94 aa19.89■□□□□ 0.77
CPNE1-216ENST00000437340 LINC00527Q9UJ94 153 aa19.89■□□□□ 0.77
CPNE1-216ENST00000437340 IGHV3-35A0A0C4DH35 117 aa19.88■□□□□ 0.77
CPNE1-216ENST00000437340 BUB3O43684 328 aa19.88■□□□□ 0.77
CPNE1-216ENST00000437340 CSN1S1P47710 185 aa19.88■□□□□ 0.77
CPNE1-216ENST00000437340 DAZAP1Q96EP5 407 aaKnown RBP19.88■□□□□ 0.77
CPNE1-216ENST00000437340 RPP21Q9H633 154 aaKnown RBP19.88■□□□□ 0.77
CPNE1-216ENST00000437340 ZNF580Q9UK33 172 aa19.88■□□□□ 0.77
CPNE1-216ENST00000437340 SMAD5-AS1Q9Y6J3 95 aa19.88■□□□□ 0.77
CPNE1-216ENST00000437340 P01737 135 aa19.88■□□□□ 0.77
CPNE1-216ENST00000437340 C1orf194Q5T5A4 169 aa19.88■□□□□ 0.77
CPNE1-216ENST00000437340 USMG5Q96IX5 58 aa19.88■□□□□ 0.77
CPNE1-216ENST00000437340 PSG8Q9UQ74 426 aa19.88■□□□□ 0.77
CPNE1-216ENST00000437340 A0A087X0K7 114 aa19.87■□□□□ 0.77
CPNE1-216ENST00000437340 CLPSL1A2RUU4 121 aa19.87■□□□□ 0.77
CPNE1-216ENST00000437340 LINC00322Q6ZN03 302 aaPredicted RBP19.87■□□□□ 0.77
CPNE1-216ENST00000437340 WFDC11Q8NEX6 87 aa19.87■□□□□ 0.77
CPNE1-216ENST00000437340 WIPF2Q8TF74 440 aaPredicted RBP19.87■□□□□ 0.77
CPNE1-216ENST00000437340 HIST1H2BLQ99880 126 aa19.87■□□□□ 0.77
CPNE1-216ENST00000437340 NPIPB6E9PJ23 425 aa19.86■□□□□ 0.77
CPNE1-216ENST00000437340 M0R3E3 92 aa19.86■□□□□ 0.77
CPNE1-216ENST00000437340 TMEM136Q6ZRR5 245 aa19.86■□□□□ 0.77
CPNE1-216ENST00000437340 OR10D4PQ8NGN7 298 aa19.86■□□□□ 0.77
CPNE1-216ENST00000437340 FBLL1A6NHQ2 334 aaKnown RBP19.85■□□□□ 0.77
CPNE1-216ENST00000437340 A8MWL6 223 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 FRMD6-AS1P0C7T7 363 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 FABP4P15090 132 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 BLCAPP62952 87 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 SLC35B1P78383 322 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 NUP35Q8NFH5 326 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 OR4B1Q8NGF8 309 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 METTL26Q96S19 204 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 NEU1Q99519 415 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 SPINK4O60575 86 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 HLA-DQA1P01909 254 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 IGHV4-31P0DP07 118 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 TPPP2P59282 170 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 DEFB112Q30KQ8 113 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 GFRA4Q9GZZ7 299 aa19.85■□□□□ 0.77
CPNE1-216ENST00000437340 ZNF331Q9NQX6 463 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-216ENST00000437340 IGHV3OR16-8A0A075B7F1 116 aa19.84■□□□□ 0.77
CPNE1-216ENST00000437340 FAM231BA6NCW3 169 aa19.84■□□□□ 0.77
CPNE1-216ENST00000437340 MRPL54Q6P161 138 aaKnown RBP19.84■□□□□ 0.77
CPNE1-216ENST00000437340 CIARTQ8N365 385 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-216ENST00000437340 ZNF469Q96JG9 3925 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-216ENST00000437340 CCDC168Q8NDH2 2452 aa19.83■□□□□ 0.77
CPNE1-216ENST00000437340 CELSR1Q9NYQ6 3014 aa19.83■□□□□ 0.77
CPNE1-216ENST00000437340 ITPR3Q14573 2671 aa19.83■□□□□ 0.77
CPNE1-216ENST00000437340 HIGD1CA8MV81 97 aa19.83■□□□□ 0.77
CPNE1-216ENST00000437340 ATP5L2Q7Z4Y8 100 aa19.83■□□□□ 0.77
CPNE1-216ENST00000437340 GBGT1Q8N5D6 347 aa19.83■□□□□ 0.77
CPNE1-216ENST00000437340 NOL4LQ96MY1 436 aaPredicted RBP19.83■□□□□ 0.77
CPNE1-216ENST00000437340 ZANQ9Y493 2812 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms