RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 SMIM18P0DKX4 95 aa12.19□□□□□ -0.46
CNOT9-204ENST00000432877 AP3S2P59780 193 aa12.19□□□□□ -0.46
CNOT9-204ENST00000432877 OR5I1Q13606 314 aa12.19□□□□□ -0.46
CNOT9-204ENST00000432877 ACOT7LQ6ZUV0 252 aa12.19□□□□□ -0.46
CNOT9-204ENST00000432877 LINC00612Q8N6U2 182 aa12.19□□□□□ -0.46
CNOT9-204ENST00000432877 SLC25A21Q9BQT8 299 aaPredicted RBP12.19□□□□□ -0.46
CNOT9-204ENST00000432877 TRAV26-1A0A087WT03 109 aa12.18□□□□□ -0.46
CNOT9-204ENST00000432877 CXCL2P19875 107 aa12.18□□□□□ -0.46
CNOT9-204ENST00000432877 VAMP1P23763 118 aa12.18□□□□□ -0.46
CNOT9-204ENST00000432877 CCDC28AQ8IWP9 274 aa12.18□□□□□ -0.46
CNOT9-204ENST00000432877 RPUSD4Q96CM3 377 aaKnown RBP12.18□□□□□ -0.46
CNOT9-204ENST00000432877 SFT2D2O95562 160 aa12.17□□□□□ -0.46
CNOT9-204ENST00000432877 OR5G3P0C626 314 aa12.17□□□□□ -0.46
CNOT9-204ENST00000432877 C4orf46Q504U0 113 aa12.17□□□□□ -0.46
CNOT9-204ENST00000432877 PXDC1Q5TGL8 231 aa12.17□□□□□ -0.46
CNOT9-204ENST00000432877 DYNC2LI1Q8TCX1 351 aa12.17□□□□□ -0.46
CNOT9-204ENST00000432877 RAB2BQ8WUD1 216 aa12.17□□□□□ -0.46
CNOT9-204ENST00000432877 DEDD2Q8WXF8 326 aa12.17□□□□□ -0.46
CNOT9-204ENST00000432877 BCL7BQ9BQE9 202 aa12.17□□□□□ -0.46
CNOT9-204ENST00000432877 APOBP04114 4563 aaKnown RBP12.17□□□□□ -0.46
CNOT9-204ENST00000432877 SMCO3A2RU48 225 aa12.16□□□□□ -0.46
CNOT9-204ENST00000432877 FNDC10F2Z333 226 aa12.16□□□□□ -0.46
CNOT9-204ENST00000432877 ZNF701M0R085 212 aaPredicted RBP12.16□□□□□ -0.46
CNOT9-204ENST00000432877 LINC00869P0C866 280 aa12.16□□□□□ -0.46
CNOT9-204ENST00000432877 ID3Q02535 119 aa12.16□□□□□ -0.46
CNOT9-204ENST00000432877 ESRGQ1W209 222 aa12.16□□□□□ -0.46
CNOT9-204ENST00000432877 MRPS26Q9BYN8 205 aaKnown RBP12.16□□□□□ -0.46
CNOT9-204ENST00000432877 MRPS16Q9Y3D3 137 aaKnown RBP12.16□□□□□ -0.46
CNOT9-204ENST00000432877 RLN2P04090 185 aa12.15□□□□□ -0.46
CNOT9-204ENST00000432877 HOXB5P09067 269 aa12.15□□□□□ -0.46
CNOT9-204ENST00000432877 ANXA7P20073 488 aaKnown RBP12.15□□□□□ -0.46
CNOT9-204ENST00000432877 TNFSF8P32971 234 aa12.15□□□□□ -0.46
CNOT9-204ENST00000432877 KRTAP10-2P60368 255 aa12.15□□□□□ -0.46
CNOT9-204ENST00000432877 TOMM5Q8N4H5 51 aa12.15□□□□□ -0.46
CNOT9-204ENST00000432877 SLC50A1Q9BRV3 221 aa12.15□□□□□ -0.46
CNOT9-204ENST00000432877 KRTAP1-5Q9BYS1 174 aa12.15□□□□□ -0.46
CNOT9-204ENST00000432877 NPVFQ9HCQ7 196 aa12.15□□□□□ -0.46
CNOT9-204ENST00000432877 H3BP45 60 aa12.14□□□□□ -0.47
CNOT9-204ENST00000432877 K7EPK0 472 aa12.14□□□□□ -0.47
CNOT9-204ENST00000432877 TMBIM6P55061 237 aa12.14□□□□□ -0.47
CNOT9-204ENST00000432877 LCN15Q6UWW0 184 aa12.14□□□□□ -0.47
CNOT9-204ENST00000432877 CCDC190Q86UF4 302 aa12.14□□□□□ -0.47
CNOT9-204ENST00000432877 UHRF2Q96PU4 802 aa12.14□□□□□ -0.47
CNOT9-204ENST00000432877 ARL6Q9H0F7 186 aa12.14□□□□□ -0.47
CNOT9-204ENST00000432877 ZNF331Q9NQX6 463 aaPredicted RBP12.14□□□□□ -0.47
CNOT9-204ENST00000432877 PGPEP1Q9NXJ5 209 aa12.14□□□□□ -0.47
CNOT9-204ENST00000432877 PSENENQ9NZ42 101 aa12.14□□□□□ -0.47
CNOT9-204ENST00000432877 A0A0J9YY99 117 aa12.13□□□□□ -0.47
CNOT9-204ENST00000432877 PMS2P5A8MQ11 134 aa12.13□□□□□ -0.47
CNOT9-204ENST00000432877 SNURFLB1AK76 121 aa12.13□□□□□ -0.47
CNOT9-204ENST00000432877 MRPS12O15235 138 aaKnown RBP12.13□□□□□ -0.47
CNOT9-204ENST00000432877 UBE2MP61081 183 aaKnown RBP12.13□□□□□ -0.47
CNOT9-204ENST00000432877 DLK1P80370 383 aa12.13□□□□□ -0.47
CNOT9-204ENST00000432877 PPP1R1AQ13522 171 aa12.13□□□□□ -0.47
CNOT9-204ENST00000432877 SMIM8Q96KF7 97 aa12.13□□□□□ -0.47
CNOT9-204ENST00000432877 ARV1Q9H2C2 271 aa12.13□□□□□ -0.47
CNOT9-204ENST00000432877 EPM2AB3EWF7 344 aa12.12□□□□□ -0.47
CNOT9-204ENST00000432877 HOXA5P20719 270 aa12.12□□□□□ -0.47
CNOT9-204ENST00000432877 POLR2GP62487 172 aaKnown RBP eCLIP12.12□□□□□ -0.47
CNOT9-204ENST00000432877 DAZ2Q13117 558 aaKnown RBP12.12□□□□□ -0.47
CNOT9-204ENST00000432877 TEPPQ6URK8 271 aa12.12□□□□□ -0.47
CNOT9-204ENST00000432877 PATE2Q6UY27 113 aa12.12□□□□□ -0.47
CNOT9-204ENST00000432877 SLIRPQ9GZT3 109 aaKnown RBP12.12□□□□□ -0.47
CNOT9-204ENST00000432877 PTTG2Q9NZH5 202 aa12.12□□□□□ -0.47
CNOT9-204ENST00000432877 GAGE12BA1L429 117 aa12.11□□□□□ -0.47
CNOT9-204ENST00000432877 GAGE7O76087 117 aa12.11□□□□□ -0.47
CNOT9-204ENST00000432877 GAGE12FP0CL80 117 aa12.11□□□□□ -0.47
CNOT9-204ENST00000432877 GAGE12GP0CL81 117 aa12.11□□□□□ -0.47
CNOT9-204ENST00000432877 GAGE12IP0CL82 117 aa12.11□□□□□ -0.47
CNOT9-204ENST00000432877 BPIFA4PQ86YQ2 179 aa12.11□□□□□ -0.47
CNOT9-204ENST00000432877 OR10P1Q8NGE3 313 aa12.11□□□□□ -0.47
CNOT9-204ENST00000432877 TRIM63Q969Q1 353 aa12.11□□□□□ -0.47
CNOT9-204ENST00000432877 EREGO14944 169 aa12.1□□□□□ -0.47
CNOT9-204ENST00000432877 PYDC2Q56P42 97 aa12.1□□□□□ -0.47
CNOT9-204ENST00000432877 GFI1BQ5VTD9 330 aa12.1□□□□□ -0.47
CNOT9-204ENST00000432877 TMEM14EPQ6UXP3 125 aa12.1□□□□□ -0.47
CNOT9-204ENST00000432877 MCFD2Q8NI22 146 aa12.1□□□□□ -0.47
CNOT9-204ENST00000432877 ODF3Q96PU9 254 aa12.1□□□□□ -0.47
CNOT9-204ENST00000432877 PYGO2Q9BRQ0 406 aa12.1□□□□□ -0.47
CNOT9-204ENST00000432877 ZNF586Q9NXT0 402 aa12.1□□□□□ -0.47
CNOT9-204ENST00000432877 MGAT4CQ9UBM8 478 aa12.1□□□□□ -0.47
CNOT9-204ENST00000432877 PXMP4Q9Y6I8 212 aa12.1□□□□□ -0.47
CNOT9-204ENST00000432877 GOSR2O14653 212 aa12.09□□□□□ -0.47
CNOT9-204ENST00000432877 KIR3DS1Q14943 382 aa12.09□□□□□ -0.47
CNOT9-204ENST00000432877 LINC00305Q7Z4B0 112 aa12.09□□□□□ -0.47
CNOT9-204ENST00000432877 ZNF546Q86UE3 836 aa12.09□□□□□ -0.47
CNOT9-204ENST00000432877 C18orf15Q96N68 181 aa12.09□□□□□ -0.47
CNOT9-204ENST00000432877 GGACTQ9BVM4 153 aa12.09□□□□□ -0.47
CNOT9-204ENST00000432877 LEPP41159 167 aa12.08□□□□□ -0.48
CNOT9-204ENST00000432877 TAS2R30P59541 319 aa12.08□□□□□ -0.48
CNOT9-204ENST00000432877 RRAS2P62070 204 aaPredicted RBP12.08□□□□□ -0.48
CNOT9-204ENST00000432877 CDPF1Q6NVV7 123 aa12.08□□□□□ -0.48
CNOT9-204ENST00000432877 C9orf170A2RU37 121 aa12.07□□□□□ -0.48
CNOT9-204ENST00000432877 SSSCA1O60232 199 aa12.07□□□□□ -0.48
CNOT9-204ENST00000432877 LINC00315P59091 139 aa12.07□□□□□ -0.48
CNOT9-204ENST00000432877 SLC38A11Q08AI6 406 aa12.07□□□□□ -0.48
CNOT9-204ENST00000432877 GUK1Q16774 197 aa12.07□□□□□ -0.48
CNOT9-204ENST00000432877 ZNF431Q8TF32 576 aaPredicted RBP12.07□□□□□ -0.48
CNOT9-204ENST00000432877 A0A096LPF7 62 aa12.06□□□□□ -0.48
CNOT9-204ENST00000432877 PRAC2D3DTV9 90 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms