RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 CD300EQ496F6 205 aaPredicted RBP12.85□□□□□ -0.35
LINC00887-203ENST00000429578 BLNKQ8WV28 456 aa12.85□□□□□ -0.35
LINC00887-203ENST00000429578 MCRIP2Q9BUT9 160 aaKnown RBP12.85□□□□□ -0.35
LINC00887-203ENST00000429578 NRN1Q9NPD7 142 aa12.85□□□□□ -0.35
LINC00887-203ENST00000429578 MGAM2Q2M2H8 2515 aa12.85□□□□□ -0.35
LINC00887-203ENST00000429578 NOTCH3Q9UM47 2321 aa12.85□□□□□ -0.35
LINC00887-203ENST00000429578 CMYA5Q8N3K9 4069 aa12.85□□□□□ -0.35
LINC00887-203ENST00000429578 PPT1P50897 306 aa12.85□□□□□ -0.35
LINC00887-203ENST00000429578 PMS2P11Q13670 270 aa12.85□□□□□ -0.35
LINC00887-203ENST00000429578 PDE6HQ13956 83 aa12.85□□□□□ -0.35
LINC00887-203ENST00000429578 C9orf66Q5T8R8 295 aa12.85□□□□□ -0.35
LINC00887-203ENST00000429578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.85□□□□□ -0.35
LINC00887-203ENST00000429578 RBPMS2Q6ZRY4 209 aaKnown RBP12.85□□□□□ -0.35
LINC00887-203ENST00000429578 TMEM61Q8N0U2 210 aa12.85□□□□□ -0.35
LINC00887-203ENST00000429578 FAM210AQ96ND0 272 aa12.85□□□□□ -0.35
LINC00887-203ENST00000429578 IGKV3-7A0A075B6H7 116 aa12.84□□□□□ -0.35
LINC00887-203ENST00000429578 TRAV25A0A0B4J276 109 aa12.84□□□□□ -0.35
LINC00887-203ENST00000429578 H3BTX0 84 aa12.84□□□□□ -0.35
LINC00887-203ENST00000429578 SORL1Q92673 2214 aa12.84□□□□□ -0.35
LINC00887-203ENST00000429578 PKD1L1Q8TDX9 2849 aa12.84□□□□□ -0.35
LINC00887-203ENST00000429578 TSPAN4O14817 238 aa12.83□□□□□ -0.36
LINC00887-203ENST00000429578 ZNF253O75346 499 aa12.83□□□□□ -0.36
LINC00887-203ENST00000429578 NDUFB4O95168 129 aa12.83□□□□□ -0.36
LINC00887-203ENST00000429578 OR2K2Q8NGT1 345 aa12.83□□□□□ -0.36
LINC00887-203ENST00000429578 MS4A6AQ9H2W1 248 aa12.83□□□□□ -0.36
LINC00887-203ENST00000429578 GNG13Q9P2W3 67 aa12.83□□□□□ -0.36
LINC00887-203ENST00000429578 SLC17A3O00476 420 aa12.82□□□□□ -0.36
LINC00887-203ENST00000429578 PAFAH1B2P68402 229 aa12.82□□□□□ -0.36
LINC00887-203ENST00000429578 GBGT1Q8N5D6 347 aa12.82□□□□□ -0.36
LINC00887-203ENST00000429578 DCANP1Q8TF63 244 aa12.82□□□□□ -0.36
LINC00887-203ENST00000429578 MANBALQ9NQG1 85 aa12.82□□□□□ -0.36
LINC00887-203ENST00000429578 ARL2-SNX15V9GYD0 113 aa12.82□□□□□ -0.36
LINC00887-203ENST00000429578 A0A1W2PRE2 83 aa12.82□□□□□ -0.36
LINC00887-203ENST00000429578 UBE2G2P60604 165 aa12.82□□□□□ -0.36
LINC00887-203ENST00000429578 RANP62826 216 aaKnown RBP12.82□□□□□ -0.36
LINC00887-203ENST00000429578 PSG9Q00887 426 aa12.82□□□□□ -0.36
LINC00887-203ENST00000429578 SLC50A1Q9BRV3 221 aa12.82□□□□□ -0.36
LINC00887-203ENST00000429578 ZNF331Q9NQX6 463 aaPredicted RBP12.82□□□□□ -0.36
LINC00887-203ENST00000429578 IZUMO1RA6ND01 250 aa12.81□□□□□ -0.36
LINC00887-203ENST00000429578 FAM74A7A6NL05 159 aa12.81□□□□□ -0.36
LINC00887-203ENST00000429578 DNASE2O00115 360 aaPredicted RBP12.81□□□□□ -0.36
LINC00887-203ENST00000429578 SOCS3O14543 225 aa12.81□□□□□ -0.36
LINC00887-203ENST00000429578 PAGE4O60829 102 aa12.81□□□□□ -0.36
LINC00887-203ENST00000429578 IFNA1P01562 189 aa12.81□□□□□ -0.36
LINC00887-203ENST00000429578 SAMD13Q5VXD3 122 aa12.81□□□□□ -0.36
LINC00887-203ENST00000429578 LYPD1Q8N2G4 141 aa12.81□□□□□ -0.36
LINC00887-203ENST00000429578 SPAG8Q99932 426 aaPredicted RBP12.81□□□□□ -0.36
LINC00887-203ENST00000429578 YTHDF2Q9Y5A9 579 aaKnown RBP12.81□□□□□ -0.36
LINC00887-203ENST00000429578 TRAV2A0A0B4J234 112 aa12.8□□□□□ -0.36
LINC00887-203ENST00000429578 IGLL1P15814 213 aa12.8□□□□□ -0.36
LINC00887-203ENST00000429578 LCN12Q6JVE5 192 aa12.8□□□□□ -0.36
LINC00887-203ENST00000429578 C16orf92Q96LL3 132 aa12.8□□□□□ -0.36
LINC00887-203ENST00000429578 Q9H3A6 140 aa12.8□□□□□ -0.36
LINC00887-203ENST00000429578 MEGF8Q7Z7M0 2845 aa12.8□□□□□ -0.36
LINC00887-203ENST00000429578 K7EQG2 157 aa12.79□□□□□ -0.36
LINC00887-203ENST00000429578 ISLRO14498 428 aa12.79□□□□□ -0.36
LINC00887-203ENST00000429578 BCL2P10415 239 aa12.79□□□□□ -0.36
LINC00887-203ENST00000429578 TAGLN2P37802 199 aaKnown RBP12.79□□□□□ -0.36
LINC00887-203ENST00000429578 DEFA6Q01524 100 aa12.79□□□□□ -0.36
LINC00887-203ENST00000429578 HAGHQ16775 308 aa12.79□□□□□ -0.36
LINC00887-203ENST00000429578 WFDC3Q8IUB2 231 aa12.79□□□□□ -0.36
LINC00887-203ENST00000429578 NKX6-2Q9C056 277 aaPredicted RBP12.79□□□□□ -0.36
LINC00887-203ENST00000429578 AAMDCQ9H7C9 122 aa12.79□□□□□ -0.36
LINC00887-203ENST00000429578 TRAV8-2A0A0B4J237 113 aa12.79□□□□□ -0.36
LINC00887-203ENST00000429578 RBFOX3A6NFN3 312 aa12.79□□□□□ -0.36
LINC00887-203ENST00000429578 TFPI2P48307 235 aa12.79□□□□□ -0.36
LINC00887-203ENST00000429578 CST9LP1Q5W188 147 aa12.79□□□□□ -0.36
LINC00887-203ENST00000429578 EXOC3-AS1Q8N2X6 119 aa12.79□□□□□ -0.36
LINC00887-203ENST00000429578 GGTLC3B5MD39 225 aa12.78□□□□□ -0.36
LINC00887-203ENST00000429578 SUMO1P63165 101 aaKnown RBP12.78□□□□□ -0.36
LINC00887-203ENST00000429578 GPR61Q9BZJ8 451 aa12.78□□□□□ -0.36
LINC00887-203ENST00000429578 OTORQ9NRC9 128 aa12.78□□□□□ -0.36
LINC00887-203ENST00000429578 MED9Q9NWA0 146 aa12.78□□□□□ -0.36
LINC00887-203ENST00000429578 CLEC5AQ9NY25 188 aa12.78□□□□□ -0.36
LINC00887-203ENST00000429578 VAX2Q9UIW0 290 aa12.78□□□□□ -0.36
LINC00887-203ENST00000429578 ZNF256Q9Y2P7 627 aaPredicted RBP12.78□□□□□ -0.36
LINC00887-203ENST00000429578 LOC102723971A0A1B0GUV8 181 aa12.77□□□□□ -0.36
LINC00887-203ENST00000429578 PGPA6NDG6 321 aa12.77□□□□□ -0.36
LINC00887-203ENST00000429578 OR4C46A6NHA9 309 aa12.77□□□□□ -0.36
LINC00887-203ENST00000429578 ID1P41134 155 aa12.77□□□□□ -0.36
LINC00887-203ENST00000429578 MEF2BQ02080 365 aaPredicted RBP12.77□□□□□ -0.36
LINC00887-203ENST00000429578 ICAM4Q14773 271 aa12.77□□□□□ -0.36
LINC00887-203ENST00000429578 GUCA2BQ16661 112 aa12.77□□□□□ -0.36
LINC00887-203ENST00000429578 IGFL4Q6B9Z1 124 aa12.77□□□□□ -0.36
LINC00887-203ENST00000429578 RARRES2Q99969 163 aa12.77□□□□□ -0.36
LINC00887-203ENST00000429578 TXNDC17Q9BRA2 123 aa12.77□□□□□ -0.36
LINC00887-203ENST00000429578 EIF5A2Q9GZV4 153 aaKnown RBP12.77□□□□□ -0.36
LINC00887-203ENST00000429578 LINC00862A6NCI5 91 aa12.76□□□□□ -0.37
LINC00887-203ENST00000429578 C11orf94C9JXX5 98 aa12.76□□□□□ -0.37
LINC00887-203ENST00000429578 ATP5G3P48201 142 aa12.76□□□□□ -0.37
LINC00887-203ENST00000429578 TOR2AQ5JU69 321 aa12.76□□□□□ -0.37
LINC00887-203ENST00000429578 ZNF506Q5JVG8 444 aa12.76□□□□□ -0.37
LINC00887-203ENST00000429578 CCDC28AQ8IWP9 274 aa12.76□□□□□ -0.37
LINC00887-203ENST00000429578 RNF182Q8N6D2 247 aa12.76□□□□□ -0.37
LINC00887-203ENST00000429578 HLA-DMBP28068 263 aa12.76□□□□□ -0.37
LINC00887-203ENST00000429578 SNRPD3P62318 126 aaKnown RBP12.76□□□□□ -0.37
LINC00887-203ENST00000429578 FAM24BQ8N5W8 94 aa12.76□□□□□ -0.37
LINC00887-203ENST00000429578 PRELID1Q9Y255 219 aa12.76□□□□□ -0.37
LINC00887-203ENST00000429578 RAB19A4D1S5 217 aa12.75□□□□□ -0.37
LINC00887-203ENST00000429578 PSG3Q16557 428 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms