RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 TRAV41A0A0B4J266 112 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 IGLV2-23P01705 113 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 NMBP08949 121 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 DIO3P55073 304 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 HSD52Q0P140 79 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 ZNF266Q14584 549 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 C12orf73Q69YU5 71 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 GPHB5Q86YW7 130 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 ZNF440Q8IYI8 595 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 ATOH7Q8N100 152 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 C11orf42Q8N5U0 333 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 SLC25A40Q8TBP6 338 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 MED13Q9UHV7 2174 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 VPS13AQ96RL7 3174 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 ACACAQ13085 2346 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 CCDC168Q8NDH2 2452 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 IGHV1OR15-9A0A0B4J2B8 117 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 HMSDA8MTL9 139 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 IGLL5B9A064 214 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 DEFA1P59665 94 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 DEFA3P59666 94 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 VMA21Q3ZAQ7 101 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 ABCA11PQ4W5N1 156 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 TMEM155Q4W5P6 130 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 MORN5Q5VZ52 161 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 FAM104BQ5XKR9 115 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 FER1L6-AS1Q8NA97 138 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 OR51A4Q8NGJ6 313 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 MRPL30Q8TCC3 161 aaKnown RBP2.22□□□□□ -2.05
RGPD1-203ENST00000428128 GEMIN6Q8WXD5 167 aaKnown RBP2.22□□□□□ -2.05
RGPD1-203ENST00000428128 MRPS24Q96EL2 167 aaKnown RBP2.22□□□□□ -2.05
RGPD1-203ENST00000428128 LYZL4Q96KX0 146 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 PCTPQ9UKL6 214 aa2.22□□□□□ -2.05
RGPD1-203ENST00000428128 AHCTF1Q8WYP5 2266 aa2.21□□□□□ -2.05
RGPD1-203ENST00000428128 FLNCQ14315 2725 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 PRAC2D3DTV9 90 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 H3BP45 60 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 I3L521 148 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 SERF1AO75920 110 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 IGHV3-13P01766 116 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 TRGC2P03986 189 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 ZNF19P17023 458 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 CRISP3P54108 245 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 FOXA1P55317 472 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 DIAPH2-AS1Q14236 149 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 RTL8BQ17RB0 113 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 LCN12Q6JVE5 192 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 TMEM91Q6ZNR0 172 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 TMUB2Q71RG4 321 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 TRAPPC6BQ86SZ2 158 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 MARCH3Q86UD3 253 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 C5orf17Q8NAS9 161 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 NUP37Q8NFH4 326 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 ANAPC13Q9BS18 74 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 C1QTNF6Q9BXI9 259 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 C6orf106Q9H6K1 298 aaPredicted RBP2.21□□□□□ -2.06
RGPD1-203ENST00000428128 TNXBP22105 4242 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 TRPM6Q9BX84 2022 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 TANC2Q9HCD6 1990 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 IGLV1-50A0A075B6I6 118 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 IGKV1-6A0A0C4DH72 117 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 LOC285095A0A1B0GVY8 99 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 MEIS3P1A6NDR6 274 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 CCDC179H3BU77 68 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 PHOX2AO14813 284 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 ZNF73O43830 326 aaPredicted RBP2.21□□□□□ -2.06
RGPD1-203ENST00000428128 CCL4P13236 92 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 IMPA1P29218 277 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 CA7P43166 264 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 ZNF136P52737 540 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 TAS2R46P59540 309 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 C2orf66Q6UXQ4 117 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 GKN2Q86XP6 184 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 TWIST2Q8WVJ9 160 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 PRAC1Q96KF2 57 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 SMIM3Q9BZL3 60 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 WDR61Q9GZS3 305 aaKnown RBP2.21□□□□□ -2.06
RGPD1-203ENST00000428128 FAM49BQ9NUQ9 324 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 ZNF230Q9UIE0 474 aaPredicted RBP2.21□□□□□ -2.06
RGPD1-203ENST00000428128 HEBP2Q9Y5Z4 205 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 ATRQ13535 2644 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 SAP18O00422 153 aaKnown RBP2.21□□□□□ -2.06
RGPD1-203ENST00000428128 NAPSAO96009 420 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 CFDP00746 253 aaPredicted RBP2.21□□□□□ -2.06
RGPD1-203ENST00000428128 CD7P09564 240 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 RNASE4P34096 147 aaKnown RBP2.21□□□□□ -2.06
RGPD1-203ENST00000428128 POLR2JP52435 117 aaKnown RBP2.21□□□□□ -2.06
RGPD1-203ENST00000428128 TMEM183BQ1AE95 376 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 KPRPQ5T749 579 aaPredicted RBP2.21□□□□□ -2.06
RGPD1-203ENST00000428128 SLC25A29Q8N8R3 303 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 CA10Q9NS85 328 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 CCDC167Q9P0B6 97 aa2.21□□□□□ -2.06
RGPD1-203ENST00000428128 MDC1Q14676 2089 aaKnown RBP2.2□□□□□ -2.06
RGPD1-203ENST00000428128 IGLV8-61A0A075B6I0 122 aa2.2□□□□□ -2.06
RGPD1-203ENST00000428128 LOC107986453A0A1B0GWG9 222 aa2.2□□□□□ -2.06
RGPD1-203ENST00000428128 IFITM10A6NMD0 228 aa2.2□□□□□ -2.06
RGPD1-203ENST00000428128 COLCA2A8K830 154 aa2.2□□□□□ -2.06
RGPD1-203ENST00000428128 SMIM1B2RUZ4 78 aa2.2□□□□□ -2.06
RGPD1-203ENST00000428128 COX7A2LO14548 114 aa2.2□□□□□ -2.06
RGPD1-203ENST00000428128 IGLV2-14P01704 120 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms