RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 RAB11BQ15907 218 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 ADAMTSL4-AS1Q5T5F5 129 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 GDF5OSQ5U4N7 250 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 SPATA31B1PQ5VZV4 182 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 FOXI2Q6ZQN5 318 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 C1orf158Q8N1D5 194 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 ZFP41Q8N8Y5 198 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 ZNF709Q8N972 641 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 BEST4Q8NFU0 473 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 OPRPNQ99935 248 aaPredicted RBP3.24□□□□□ -1.89
SFXN1-202ENST00000421887 GABARAPL1Q9H0R8 117 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 DCSTAMPQ9H295 470 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 SAV1Q9H4B6 383 aaPredicted RBP3.24□□□□□ -1.89
SFXN1-202ENST00000421887 DPH3P1Q9H4G8 78 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 NDUFA4L2Q9NRX3 87 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 FKBP11Q9NYL4 201 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 ARL2BPQ9Y2Y0 163 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 TIMM8BQ9Y5J9 83 aaPredicted RBP3.24□□□□□ -1.89
SFXN1-202ENST00000421887 OR51B2Q9Y5P1 312 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 LY96Q9Y6Y9 160 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 RNF213Q63HN8 5207 aa3.24□□□□□ -1.89
SFXN1-202ENST00000421887 IRGMA1A4Y4 181 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 K7EP13 123 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 SULT1C2O00338 296 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 DENRO43583 198 aaKnown RBP3.23□□□□□ -1.89
SFXN1-202ENST00000421887 LALBAP00709 142 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 INSP01308 110 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 EVI2AP22794 236 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 TSPOP30536 169 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 ETV1P50549 477 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 TMEM50BP56557 158 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 ERHP84090 104 aaKnown RBP3.23□□□□□ -1.89
SFXN1-202ENST00000421887 POU2AF1Q16633 256 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 CNPY1Q3B7I2 92 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 ACOT6Q3I5F7 207 aaPredicted RBP3.23□□□□□ -1.89
SFXN1-202ENST00000421887 C6orf226Q5I0X4 101 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 SPANXN2Q5MJ10 180 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 C1orf100Q5SVJ3 147 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 FAM78BQ5VT40 261 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 SFXN4Q6P4A7 337 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 IGF2BP2-AS1Q96M15 143 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 PRNDQ9UKY0 176 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 PYGO1Q9Y3Y4 419 aa3.23□□□□□ -1.89
SFXN1-202ENST00000421887 TRAV30A0A087WSZ9 112 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 IGKV1D-13A0A0B4J2D9 117 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 TCRBV3S1A0A5B6 114 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 ZNF701M0R085 212 aaPredicted RBP3.22□□□□□ -1.89
SFXN1-202ENST00000421887 CORTO00230 105 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 GSTZ1O43708 216 aaPredicted RBP3.22□□□□□ -1.89
SFXN1-202ENST00000421887 TMEM50AO95807 157 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 SNRPCP09234 159 aaKnown RBP3.22□□□□□ -1.89
SFXN1-202ENST00000421887 IGKV1-13P0DP09 117 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 SNCAP37840 140 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 SUB1P53999 127 aaKnown RBP eCLIP3.22□□□□□ -1.89
SFXN1-202ENST00000421887 QRFPP83859 136 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 IL18Q14116 193 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 ZFP69Q49AA0 526 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 AADACL3Q5VUY0 350 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 RNASEKQ6P5S7 137 aaKnown RBP3.22□□□□□ -1.89
SFXN1-202ENST00000421887 PRSS48Q7RTY5 328 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 MTURNQ8N3F0 131 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 Q8N814 137 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 C15orf54Q8N8G6 183 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 BPIFB6Q8NFQ5 453 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 OR51H1Q8NH63 302 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 Q8WTZ3 238 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 TMEM203Q969S6 136 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 C16orf74Q96GX8 76 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 LINC01587Q99440 93 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 TSC22D3Q99576 134 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 PRR34Q9NV39 138 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 COMMD9Q9P000 198 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 CLEC2DQ9UHP7 191 aa3.22□□□□□ -1.89
SFXN1-202ENST00000421887 VPS13BQ7Z7G8 4022 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 TRAV5A0A0B4J249 113 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 ZNF98A6NK75 572 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 FOXI3A8MTJ6 420 aaPredicted RBP3.21□□□□□ -1.9
SFXN1-202ENST00000421887 H7C423 109 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 MFNGO00587 321 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 KRASP01116 189 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 RLN2P04090 185 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 PRM2P04554 102 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 STAG3L3P0CL85 134 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 GATA1P15976 413 aaPredicted RBP3.21□□□□□ -1.9
SFXN1-202ENST00000421887 OPRK1P41145 380 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 PSMB3P49720 205 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 NDUFV3P56181 108 aaKnown RBP3.21□□□□□ -1.9
SFXN1-202ENST00000421887 DEFB1P60022 68 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 RPL37AP61513 92 aaKnown RBP3.21□□□□□ -1.9
SFXN1-202ENST00000421887 PRCDQ00LT1 54 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 EIF4EBP1Q13541 118 aaPredicted RBP3.21□□□□□ -1.9
SFXN1-202ENST00000421887 LAGE3Q14657 143 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 ARL6IP1Q15041 203 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 ZNF79Q15937 498 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 SPINK13Q1W4C9 94 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 HSD17B12Q53GQ0 312 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 LINC00242Q5T6M2 205 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 Q6ZS49 121 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 SCXQ7RTU7 201 aa3.21□□□□□ -1.9
SFXN1-202ENST00000421887 H2BFWTQ7Z2G1 175 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms