RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 COTL1Q14019 142 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 RFNGQ9Y644 331 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 PLA2G2AP14555 144 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 DAD1P61803 113 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 ADARB2-AS1A8MUL3 147 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 C15orf65H3BRN8 121 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 IGHV4-38-2P0DP08 117 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 BTCP35070 178 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 JOSD1Q15040 202 aaPredicted RBP8.62□□□□□ -1.03
PTCH1-206ENST00000421141 C12orf57Q99622 126 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 IFITM10A6NMD0 228 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 FOLR2P14207 255 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 RSPO1Q2MKA7 263 aaPredicted RBP8.61□□□□□ -1.03
PTCH1-206ENST00000421141 DPH3P1Q9H4G8 78 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 FOXE3Q13461 319 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 SPATA31B1PQ5VZV4 182 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 A6NDN8 102 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 EREGO14944 169 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 RPL36AP83881 106 aaKnown RBP8.61□□□□□ -1.03
PTCH1-206ENST00000421141 PSG3Q16557 428 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 C1orf194Q5T5A4 169 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 RPL36ALQ969Q0 106 aaKnown RBP8.61□□□□□ -1.03
PTCH1-206ENST00000421141 MRPL27Q9P0M9 148 aaKnown RBP8.61□□□□□ -1.03
PTCH1-206ENST00000421141 IZUMO1RA6ND01 250 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 H3BVH4 76 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 TMEM50AO95807 157 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 TRAV9-1A0A075B6T8 112 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 CENPVL3A0A0U1RRI6 287 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 PRSS57Q6UWY2 283 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 TMEM14EPQ6UXP3 125 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 VCX2Q9H322 139 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 SEPSECSQ9HD40 501 aaKnown RBP8.61□□□□□ -1.03
PTCH1-206ENST00000421141 TOMM7Q9P0U1 55 aa8.61□□□□□ -1.03
PTCH1-206ENST00000421141 C7orf71A4D174 169 aa8.6□□□□□ -1.03
PTCH1-206ENST00000421141 COX6CP09669 75 aa8.6□□□□□ -1.03
PTCH1-206ENST00000421141 MRAPQ8TCY5 172 aa8.6□□□□□ -1.03
PTCH1-206ENST00000421141 YPEL3P61236 119 aaPredicted RBP8.6□□□□□ -1.03
PTCH1-206ENST00000421141 ST6GALNAC6Q969X2 333 aa8.6□□□□□ -1.03
PTCH1-206ENST00000421141 TRAV5A0A0B4J249 113 aa8.6□□□□□ -1.03
PTCH1-206ENST00000421141 ERASQ7Z444 233 aa8.6□□□□□ -1.03
PTCH1-206ENST00000421141 RNASE7Q9H1E1 156 aaKnown RBP8.6□□□□□ -1.03
PTCH1-206ENST00000421141 IGLV3-1P01715 115 aa8.6□□□□□ -1.03
PTCH1-206ENST00000421141 C5orf24Q7Z6I8 188 aa8.6□□□□□ -1.03
PTCH1-206ENST00000421141 DEFB130BP0DP73 79 aa8.6□□□□□ -1.03
PTCH1-206ENST00000421141 DEFB130AP0DP74 79 aa8.6□□□□□ -1.03
PTCH1-206ENST00000421141 TRAV8-6A0A0B4J262 113 aa8.59□□□□□ -1.03
PTCH1-206ENST00000421141 PPBPP02775 128 aa8.59□□□□□ -1.03
PTCH1-206ENST00000421141 SLC17A3O00476 420 aa8.59□□□□□ -1.03
PTCH1-206ENST00000421141 PKIAP61925 76 aa8.59□□□□□ -1.03
PTCH1-206ENST00000421141 LOXL1Q08397 574 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-206ENST00000421141 CTSZQ9UBR2 303 aa8.59□□□□□ -1.03
PTCH1-206ENST00000421141 F5H768 121 aa8.59□□□□□ -1.03
PTCH1-206ENST00000421141 CBLN1P23435 193 aa8.59□□□□□ -1.03
PTCH1-206ENST00000421141 ZNF414Q96IQ9 312 aa8.59□□□□□ -1.03
PTCH1-206ENST00000421141 TMEM160Q9NX00 188 aa8.59□□□□□ -1.03
PTCH1-206ENST00000421141 TRGC2P03986 189 aa8.59□□□□□ -1.04
PTCH1-206ENST00000421141 PMCHL1Q16048 86 aa8.59□□□□□ -1.04
PTCH1-206ENST00000421141 C15orf62A8K5M9 175 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 SRSF1Q07955 248 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTCH1-206ENST00000421141 KIAA1644Q3SXP7 199 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 TTC9CQ8N5M4 171 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 HSPB9Q9BQS6 159 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 PAM16Q9Y3D7 125 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.58□□□□□ -1.04
PTCH1-206ENST00000421141 TCTAP57738 103 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 HIST1H4GQ99525 98 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 SHANK2-AS3Q9BTD1 123 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 HOXD3P31249 432 aaPredicted RBP8.58□□□□□ -1.04
PTCH1-206ENST00000421141 GCSAMLQ5JQS6 135 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 TGIF2-C20orf24A0A0A6YYL0 155 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 IGHV3-73A0A0B4J1V6 119 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 MMP23AO75900 390 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 RNASE1P07998 156 aaKnown RBP8.58□□□□□ -1.04
PTCH1-206ENST00000421141 RIPPLY3P57055 190 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 KRTAP27-1Q3LI81 207 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 LY6G6FQ5SQ64 297 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 XCL2Q9UBD3 114 aa8.58□□□□□ -1.04
PTCH1-206ENST00000421141 RNF222A6NCQ9 220 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 RNF151Q2KHN1 245 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 IGKV1-6A0A0C4DH72 117 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.57□□□□□ -1.04
PTCH1-206ENST00000421141 APOHP02749 345 aaPredicted RBP8.57□□□□□ -1.04
PTCH1-206ENST00000421141 PPIFP30405 207 aaKnown RBP8.57□□□□□ -1.04
PTCH1-206ENST00000421141 CDX1P47902 265 aaPredicted RBP8.57□□□□□ -1.04
PTCH1-206ENST00000421141 ORMDL2Q53FV1 153 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 C18orf15Q96N68 181 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 TRAV9-2A0A087WT02 112 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 H7C2G1 150 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 OR13C6PQ8NH95 151 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 CYSLTR1Q9Y271 337 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 ANKRD17O75179 2603 aaKnown RBP8.57□□□□□ -1.04
PTCH1-206ENST00000421141 PCSK5Q92824 1860 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 NAV2Q8IVL1 2488 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 GTF2H5Q6ZYL4 71 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 C11orf53Q8IXP5 236 aa8.57□□□□□ -1.04
PTCH1-206ENST00000421141 NXT2Q9NPJ8 142 aaKnown RBP8.57□□□□□ -1.04
PTCH1-206ENST00000421141 IGHV3-53P01767 116 aa8.56□□□□□ -1.04
PTCH1-206ENST00000421141 CKS1BP61024 79 aa8.56□□□□□ -1.04
PTCH1-206ENST00000421141 OSTCQ9NRP0 149 aa8.56□□□□□ -1.04
PTCH1-206ENST00000421141 LOC102724200A0A096LPH7 203 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms