RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 PSG8Q9UQ74 426 aa11.34□□□□□ -0.59
HLA-DPA1-242ENST00000419277 IGSF10Q6WRI0 2623 aa11.34□□□□□ -0.59
HLA-DPA1-242ENST00000419277 CFAP46Q8IYW2 2715 aa11.33□□□□□ -0.6
HLA-DPA1-242ENST00000419277 TRAV41A0A0B4J266 112 aa11.33□□□□□ -0.6
HLA-DPA1-242ENST00000419277 MRPL53Q96EL3 112 aaKnown RBP11.33□□□□□ -0.6
HLA-DPA1-242ENST00000419277 MS4A10Q96PG2 267 aa11.33□□□□□ -0.6
HLA-DPA1-242ENST00000419277 ZFAND3Q9H8U3 227 aa11.33□□□□□ -0.6
HLA-DPA1-242ENST00000419277 RBAKDNA6NC62 111 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 GPR183P32249 361 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 KLF5Q13887 457 aaPredicted RBP11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 PRNTQ86SH4 94 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 USMG5Q96IX5 58 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 KCNS1Q96KK3 526 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 IGHV4-30-2A0A087WSY4 118 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 GRIFINA4D1Z8 144 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 A8MWP6 167 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 SERF1AO75920 110 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 CA1P00915 261 aaPredicted RBP11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 ATP5G2Q06055 141 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 NOL4LQ96MY1 436 aaPredicted RBP11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 METTL26Q96S19 204 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 SAMD10Q9BYL1 202 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 HIF1ANQ9NWT6 349 aa11.32□□□□□ -0.6
HLA-DPA1-242ENST00000419277 BUB3O43684 328 aa11.31□□□□□ -0.6
HLA-DPA1-242ENST00000419277 IGHG2P01859 326 aa11.31□□□□□ -0.6
HLA-DPA1-242ENST00000419277 COX6B1P14854 86 aa11.31□□□□□ -0.6
HLA-DPA1-242ENST00000419277 RAB4AP20338 218 aa11.31□□□□□ -0.6
HLA-DPA1-242ENST00000419277 SRIP30626 198 aa11.31□□□□□ -0.6
HLA-DPA1-242ENST00000419277 CTAG1AP78358 180 aa11.31□□□□□ -0.6
HLA-DPA1-242ENST00000419277 SRSF2Q01130 221 aaKnown RBP11.31□□□□□ -0.6
HLA-DPA1-242ENST00000419277 TOMM20LQ6UXN7 152 aa11.31□□□□□ -0.6
HLA-DPA1-242ENST00000419277 GATD1Q8NB37 220 aa11.31□□□□□ -0.6
HLA-DPA1-242ENST00000419277 CCDC140Q96MF4 163 aa11.31□□□□□ -0.6
HLA-DPA1-242ENST00000419277 NDFIP1Q9BT67 221 aa11.31□□□□□ -0.6
HLA-DPA1-242ENST00000419277 GNB4Q9HAV0 340 aa11.31□□□□□ -0.6
HLA-DPA1-242ENST00000419277 H3BTX0 84 aa11.3□□□□□ -0.6
HLA-DPA1-242ENST00000419277 HAX1O00165 279 aa11.3□□□□□ -0.6
HLA-DPA1-242ENST00000419277 CLEC3BP05452 202 aa11.3□□□□□ -0.6
HLA-DPA1-242ENST00000419277 RPS20P60866 119 aaKnown RBP11.3□□□□□ -0.6
HLA-DPA1-242ENST00000419277 TMEM256Q8N2U0 113 aa11.3□□□□□ -0.6
HLA-DPA1-242ENST00000419277 SIGLECL1Q8N7X8 197 aa11.3□□□□□ -0.6
HLA-DPA1-242ENST00000419277 PIFOQ8TCI5 191 aa11.3□□□□□ -0.6
HLA-DPA1-242ENST00000419277 BORCS7Q96B45 105 aa11.3□□□□□ -0.6
HLA-DPA1-242ENST00000419277 TP53TG3Q9ULZ0 132 aa11.3□□□□□ -0.6
HLA-DPA1-242ENST00000419277 TRAV8-1A0A0A6YYK1 113 aa11.29□□□□□ -0.6
HLA-DPA1-242ENST00000419277 A6NDX4 124 aa11.29□□□□□ -0.6
HLA-DPA1-242ENST00000419277 SNRPCP09234 159 aaKnown RBP11.29□□□□□ -0.6
HLA-DPA1-242ENST00000419277 BMI1P35226 326 aa11.29□□□□□ -0.6
HLA-DPA1-242ENST00000419277 SLC35B1P78383 322 aa11.29□□□□□ -0.6
HLA-DPA1-242ENST00000419277 OR2D3Q8NGH3 330 aa11.29□□□□□ -0.6
HLA-DPA1-242ENST00000419277 S4R3C0 116 aa11.29□□□□□ -0.6
HLA-DPA1-242ENST00000419277 SPINK4O60575 86 aa11.29□□□□□ -0.6
HLA-DPA1-242ENST00000419277 SLAQ13239 276 aa11.29□□□□□ -0.6
HLA-DPA1-242ENST00000419277 RIGQ13278 110 aa11.29□□□□□ -0.6
HLA-DPA1-242ENST00000419277 LINC01356Q8N9X3 169 aa11.29□□□□□ -0.6
HLA-DPA1-242ENST00000419277 ZC2HC1AQ96GY0 325 aa11.29□□□□□ -0.6
HLA-DPA1-242ENST00000419277 AKAP6Q13023 2319 aa11.28□□□□□ -0.6
HLA-DPA1-242ENST00000419277 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.28□□□□□ -0.6
HLA-DPA1-242ENST00000419277 A0A0G2JLM5 398 aa11.28□□□□□ -0.6
HLA-DPA1-242ENST00000419277 A0A1B0GUT8 65 aa11.28□□□□□ -0.6
HLA-DPA1-242ENST00000419277 LINC00310P59036 64 aa11.28□□□□□ -0.6
HLA-DPA1-242ENST00000419277 LINC00322Q6ZN03 302 aaPredicted RBP11.28□□□□□ -0.6
HLA-DPA1-242ENST00000419277 C18orf32Q8TCD1 76 aa11.28□□□□□ -0.6
HLA-DPA1-242ENST00000419277 GTSF1Q8WW33 167 aa11.28□□□□□ -0.6
HLA-DPA1-242ENST00000419277 C17orf77Q96MU5 243 aa11.28□□□□□ -0.6
HLA-DPA1-242ENST00000419277 SH2D7A6NKC9 451 aaPredicted RBP11.27□□□□□ -0.61
HLA-DPA1-242ENST00000419277 LINC00587B1AMM8 73 aa11.27□□□□□ -0.61
HLA-DPA1-242ENST00000419277 G3V318 75 aa11.27□□□□□ -0.61
HLA-DPA1-242ENST00000419277 CHEK1O14757 476 aa11.27□□□□□ -0.61
HLA-DPA1-242ENST00000419277 ZNF324O75467 553 aaPredicted RBP11.27□□□□□ -0.61
HLA-DPA1-242ENST00000419277 SGK494Q96LW2 274 aa11.27□□□□□ -0.61
HLA-DPA1-242ENST00000419277 NAGKQ9UJ70 344 aa11.27□□□□□ -0.61
HLA-DPA1-242ENST00000419277 U3KQE9 123 aa11.27□□□□□ -0.61
HLA-DPA1-242ENST00000419277 CACNA1BQ00975 2339 aa11.27□□□□□ -0.61
HLA-DPA1-242ENST00000419277 MED13LQ71F56 2210 aa11.27□□□□□ -0.61
HLA-DPA1-242ENST00000419277 TMEM89A2RUT3 159 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 M0R3E3 92 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 NDUFA4O00483 81 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 IGHV3-23P01764 117 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 GPX1P07203 203 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 IGHV4-38-2P0DP08 117 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 CLEC19AQ6UXS0 136 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 BRD3OSQ6XYD6 125 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 LRRC75A-AS1Q8N1F1 130 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 PRR25Q96S07 402 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 ALKBH7Q9BT30 221 aaPredicted RBP11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 PPP1R14DQ9NXH3 145 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 USP9XQ93008 2570 aaPredicted RBP11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 TRGV3P03979 118 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 AMTP48728 403 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 SAMD13Q5VXD3 122 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 TCF24Q7RTU0 167 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 TMEM219Q86XT9 240 aa11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 CHCHD1Q96BP2 118 aaKnown RBP11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 BEX4Q9NWD9 120 aaPredicted RBP11.26□□□□□ -0.61
HLA-DPA1-242ENST00000419277 USP24Q9UPU5 2620 aa11.25□□□□□ -0.61
HLA-DPA1-242ENST00000419277 A0A1W2PS18 150 aa11.25□□□□□ -0.61
HLA-DPA1-242ENST00000419277 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
HLA-DPA1-242ENST00000419277 ZNF785A8K8V0 405 aa11.25□□□□□ -0.61
HLA-DPA1-242ENST00000419277 H3BUX3 64 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms