RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 NUDT11Q96G61 164 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 GRAMD2BQ96HH9 432 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 ZFP30Q9Y2G7 519 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 SMAD5-AS1Q9Y6J3 95 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 CELSR2Q9HCU4 2923 aa7□□□□□ -1.29
LINCMD1-201ENST00000418518 CENPEQ02224 2701 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 TMEM89A2RUT3 159 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 FAM231BA6NCW3 169 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 IZUMO1RA6ND01 250 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 ZNF705GA8MUZ8 300 aaPredicted RBP6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 DIRC3C9JPN6 131 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 RNF223E7ERA6 249 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 BUB3O43684 328 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 TGFAP01135 160 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 MT-ND6P03923 174 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 TRGV3P03979 118 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 PLA2G2AP14555 144 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 IER3P46695 156 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 MEOX2P50222 304 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 AKR1D1P51857 326 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 PSG3Q16557 428 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 DEFB112Q30KQ8 113 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 WDR73Q6P4I2 378 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 CLEC19AQ6UXS0 136 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 GOLT1AQ6ZVE7 132 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 OR8I2Q8N0Y5 310 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 NHLRC2Q8NBF2 726 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 OR4B1Q8NGF8 309 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 TSKUQ8WUA8 353 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 GNB1LQ9BYB4 327 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 AAMDCQ9H7C9 122 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 TRAPPC1Q9Y5R8 145 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 APCP25054 2843 aa6.99□□□□□ -1.29
LINCMD1-201ENST00000418518 ZNF785A8K8V0 405 aa6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 J3QKU1 62 aa6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 K7EQM0 130 aa6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 IGHV4-59P01825 116 aa6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 C9orf152Q5JTZ5 239 aa6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 FAM209BQ5JX69 171 aa6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 ATP5L2Q7Z4Y8 100 aa6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 MRPL53Q96EL3 112 aaKnown RBP6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 MS4A10Q96PG2 267 aa6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 PSMG3-AS1Q96PY0 264 aa6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 GFRA4Q9GZZ7 299 aa6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 RPP21Q9H633 154 aaKnown RBP6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 RPH3ALQ9UNE2 315 aa6.98□□□□□ -1.29
LINCMD1-201ENST00000418518 NDUFA4O00483 81 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 IGHG4P01861 327 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 TPPP2P59282 170 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 BLCAPP62952 87 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 Q6YL49 198 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 LINC00322Q6ZN03 302 aaPredicted RBP6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 TMEM136Q6ZRR5 245 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 Q6ZS46 218 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 NOL4LQ96MY1 436 aaPredicted RBP6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 METTL26Q96S19 204 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 SLC50A1Q9BRV3 221 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 ZNF331Q9NQX6 463 aaPredicted RBP6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 NAT8BQ9UHF3 227 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 VPREB3Q9UKI3 123 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 PSG8Q9UQ74 426 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 ITPR3Q14573 2671 aa6.97□□□□□ -1.29
LINCMD1-201ENST00000418518 ZANQ9Y493 2812 aa6.96□□□□□ -1.29
LINCMD1-201ENST00000418518 TRAV8-1A0A0A6YYK1 113 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 A0A0G2JLM5 398 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 A0A1B0GXF2 115 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 XKRY2A2RUG3 117 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 RBAKDNA6NC62 111 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 A8MWL6 223 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 M0R3E3 92 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 HLA-DQA1P01909 254 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 CBLN1P23435 193 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 ARL3P36405 182 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 CSN1S1P47710 185 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 DNLZQ5SXM8 178 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 GFI1BQ5VTD9 330 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 GBGT1Q8N5D6 347 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 NUP35Q8NFH5 326 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 GLMPQ8WWB7 406 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 Q96MF0 132 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 NEU1Q99519 415 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 C12orf57Q99622 126 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 MRPL18Q9H0U6 180 aaKnown RBP6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 GNB4Q9HAV0 340 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 SERTAD4Q9NUC0 356 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 CLEC5AQ9NY25 188 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 LINC00527Q9UJ94 153 aa6.96□□□□□ -1.3
LINCMD1-201ENST00000418518 TENM4Q6N022 2769 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 SNURFLB1AK76 121 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 CHEK1O14757 476 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 CA1P00915 261 aaPredicted RBP6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 P01737 135 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 FRMD6-AS1P0C7T7 363 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 ESDP10768 282 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 PSMB8P28062 276 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 FOXA3P55318 350 aaPredicted RBP6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 TCL1AP56279 114 aa6.95□□□□□ -1.3
LINCMD1-201ENST00000418518 CYB5R2Q6BCY4 276 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms