RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 ZNF883P0CG24 379 aa6.2□□□□□ -1.42
VRK2-203ENST00000417641 WT1P19544 449 aaPredicted RBP6.2□□□□□ -1.42
VRK2-203ENST00000417641 RPL27AP46776 148 aaKnown RBP6.2□□□□□ -1.42
VRK2-203ENST00000417641 CCL11P51671 97 aa6.2□□□□□ -1.42
VRK2-203ENST00000417641 PSMG4Q5JS54 123 aa6.2□□□□□ -1.42
VRK2-203ENST00000417641 ZNF562Q6V9R5 426 aa6.2□□□□□ -1.42
VRK2-203ENST00000417641 BCL6BQ8N143 479 aaPredicted RBP6.2□□□□□ -1.42
VRK2-203ENST00000417641 NGBQ9NPG2 151 aa6.2□□□□□ -1.42
VRK2-203ENST00000417641 F11RQ9Y624 299 aaKnown RBP6.2□□□□□ -1.42
VRK2-203ENST00000417641 E9PLD3 99 aa6.19□□□□□ -1.42
VRK2-203ENST00000417641 IGKV1-17P01599 117 aa6.19□□□□□ -1.42
VRK2-203ENST00000417641 MC5RP33032 325 aa6.19□□□□□ -1.42
VRK2-203ENST00000417641 NMUP48645 174 aa6.19□□□□□ -1.42
VRK2-203ENST00000417641 LYZP61626 148 aa6.19□□□□□ -1.42
VRK2-203ENST00000417641 ZNF474Q6S9Z5 364 aaPredicted RBP6.19□□□□□ -1.42
VRK2-203ENST00000417641 C8orf49Q96NF6 230 aa6.19□□□□□ -1.42
VRK2-203ENST00000417641 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
VRK2-203ENST00000417641 SPATA25Q9BR10 227 aa6.19□□□□□ -1.42
VRK2-203ENST00000417641 SHANK2-AS3Q9BTD1 123 aa6.19□□□□□ -1.42
VRK2-203ENST00000417641 SPANXB1Q9NS25 103 aaPredicted RBP6.19□□□□□ -1.42
VRK2-203ENST00000417641 SERTM2A0A1B0GWG4 89 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 C16orf97H3BN30 126 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 FTH1P19P0C7X4 201 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 HLA-DRB4P13762 266 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 ODF1Q14990 250 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 CD300EQ496F6 205 aaPredicted RBP6.18□□□□□ -1.42
VRK2-203ENST00000417641 TMEM133Q9H2Q1 129 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 HLA-DRB4X5D2U9 266 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 COL6A3P12111 3177 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 TMEM238LA0A1B0GVL6 79 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 GAGE12HA6NDE8 117 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 MBD3L4A6NDZ8 208 aaPredicted RBP6.18□□□□□ -1.42
VRK2-203ENST00000417641 MBD3L3A6NE82 208 aaPredicted RBP6.18□□□□□ -1.42
VRK2-203ENST00000417641 MBD3L5A6NJ08 208 aaPredicted RBP6.18□□□□□ -1.42
VRK2-203ENST00000417641 SRSF1Q07955 248 aaKnown RBP eCLIP6.18□□□□□ -1.423e-7■■■■□ 22.8
VRK2-203ENST00000417641 TM4SF20Q53R12 229 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 MBD3L2Q8NHZ7 208 aaPredicted RBP6.18□□□□□ -1.42
VRK2-203ENST00000417641 RNF185Q96GF1 192 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 CHAC1Q9BUX1 264 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 SCNM1Q9BWG6 230 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 TTTY13Q9BZ97 58 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 TSSC4Q9Y5U2 329 aaPredicted RBP6.18□□□□□ -1.42
VRK2-203ENST00000417641 KNTC1P50748 2209 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 CELSR3Q9NYQ7 3312 aa6.18□□□□□ -1.42
VRK2-203ENST00000417641 AHCTF1Q8WYP5 2266 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 SMKR1H3BMG3 65 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 K7ERJ3 54 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 SH2D1AO60880 128 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 IGLC6P0CF74 106 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 EVI2AP22794 236 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 GCSHP23434 173 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 CNTFRP26992 372 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 RPL24P83731 157 aaKnown RBP6.17□□□□□ -1.42
VRK2-203ENST00000417641 IGFL2Q6UWQ7 119 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 GTSF1LQ9H1H1 148 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 SIGLEC9Q9Y336 463 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 CACNA1GO43497 2377 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 NAV3Q8IVL0 2385 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 TRBV25-1A0A075B6N4 114 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 A0A1W2PRD5 423 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 A0A1W2PRF3 423 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 A0A1W2PRM7 423 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 IGLL5B9A064 214 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 F8W1H4 67 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 M0R3E3 92 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 CEACAM4O75871 244 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 PRB4P10163 310 aaPredicted RBP6.17□□□□□ -1.42
VRK2-203ENST00000417641 WFDC2Q14508 124 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 C22orf34Q6ZV56 151 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 PRO0461Q9UI25 63 aa6.17□□□□□ -1.42
VRK2-203ENST00000417641 K7EQM0 130 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 APELAP0DMC3 54 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 CCDC144NLQ6NUI1 221 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 WFDC3Q8IUB2 231 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 CEND1Q8N111 149 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 ZNF491Q8N8L2 437 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 SPAG8Q99932 426 aaPredicted RBP6.16□□□□□ -1.42
VRK2-203ENST00000417641 TPPP3Q9BW30 176 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 ARFGEF3Q5TH69 2177 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 IGHV3-72A0A0B4J1Y9 119 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 FBLL1A6NHQ2 334 aaKnown RBP6.16□□□□□ -1.42
VRK2-203ENST00000417641 K7EIM0 57 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 GAS8-AS1O95177 125 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 EGR2P11161 476 aaPredicted RBP6.16□□□□□ -1.42
VRK2-203ENST00000417641 FCER1GP30273 86 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 CKS2P33552 79 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 SMAGPQ0VAQ4 97 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 LCE2DQ5TA82 110 aaPredicted RBP6.16□□□□□ -1.42
VRK2-203ENST00000417641 DHRS13Q6UX07 377 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 LYPD2Q6UXB3 125 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 ATP6V0BQ99437 205 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 CNFNQ9BYD5 112 aa6.16□□□□□ -1.42
VRK2-203ENST00000417641 LAMTOR5O43504 91 aa6.15□□□□□ -1.42
VRK2-203ENST00000417641 LOXP28300 417 aaPredicted RBP6.15□□□□□ -1.42
VRK2-203ENST00000417641 BMI1P35226 326 aa6.15□□□□□ -1.42
VRK2-203ENST00000417641 TMEM155Q4W5P6 130 aa6.15□□□□□ -1.42
VRK2-203ENST00000417641 FDCSPQ8NFU4 85 aa6.15□□□□□ -1.42
VRK2-203ENST00000417641 RASL11BQ9BPW5 248 aa6.15□□□□□ -1.42
VRK2-203ENST00000417641 CTSZQ9UBR2 303 aa6.15□□□□□ -1.42
VRK2-203ENST00000417641 HEATR1Q9H583 2144 aaKnown RBP6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms