RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 A8MWV9 139 aa10.52□□□□□ -0.73
SCN1B-202ENST00000415950 DUX4L9Q6RFH8 374 aaPredicted RBP10.52□□□□□ -0.73
SCN1B-202ENST00000415950 CHTOPQ9Y3Y2 248 aaKnown RBP10.52□□□□□ -0.73
SCN1B-202ENST00000415950 SLAQ13239 276 aa10.52□□□□□ -0.73
SCN1B-202ENST00000415950 CHCHD1Q96BP2 118 aaKnown RBP10.52□□□□□ -0.73
SCN1B-202ENST00000415950 TMEM101Q96IK0 257 aa10.52□□□□□ -0.73
SCN1B-202ENST00000415950 UCNP55089 124 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 UBE2V1Q13404 147 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 TICRRQ7Z2Z1 1910 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 IGF2RP11717 2491 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 IGKV1D-17A0A075B6S4 117 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 NDUFS8O00217 210 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 PPBPP02775 128 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 ZC2HC1BQ5TFG8 222 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 COLCA1Q6ZS62 124 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 FOXL2NBQ6ZUU3 175 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 FGF23Q9GZV9 251 aaPredicted RBP10.51□□□□□ -0.73
SCN1B-202ENST00000415950 SRRM5B3KS81 715 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 PVRIGQ6DKI7 326 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 CFAP54Q96N23 3096 aa10.51□□□□□ -0.73
SCN1B-202ENST00000415950 GAGE12BA1L429 117 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 IGHV1-46P01743 117 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 C8orf46Q8TAG6 207 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 H3BRM9 83 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 SMAD7O15105 426 aaKnown RBP10.5□□□□□ -0.73
SCN1B-202ENST00000415950 IGLC2P0DOY2 106 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 IGLC3P0DOY3 106 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 SLC25A48Q6ZT89 311 aaKnown RBP10.5□□□□□ -0.73
SCN1B-202ENST00000415950 C18orf32Q8TCD1 76 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 NCOR2Q9Y618 2525 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 OTOGLQ3ZCN5 2332 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 SYS1-DBNDD2H3BUS1 97 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 TDGF1P13385 188 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 COX6B1P14854 86 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 SRSF7Q16629 238 aaKnown RBP eCLIP10.5□□□□□ -0.73
SCN1B-202ENST00000415950 PSMG4Q5JS54 123 aa10.5□□□□□ -0.73
SCN1B-202ENST00000415950 MBNL3Q9NUK0 354 aaKnown RBP10.5□□□□□ -0.73
SCN1B-202ENST00000415950 EML6Q6ZMW3 1958 aa10.49□□□□□ -0.73
SCN1B-202ENST00000415950 OCIAD2Q56VL3 154 aa10.49□□□□□ -0.73
SCN1B-202ENST00000415950 Q6ZS49 121 aa10.49□□□□□ -0.73
SCN1B-202ENST00000415950 AMN1Q8IY45 258 aa10.49□□□□□ -0.73
SCN1B-202ENST00000415950 FAM168AQ92567 244 aa10.49□□□□□ -0.73
SCN1B-202ENST00000415950 IGHV3-73A0A0B4J1V6 119 aa10.49□□□□□ -0.73
SCN1B-202ENST00000415950 IGLL1P15814 213 aa10.49□□□□□ -0.73
SCN1B-202ENST00000415950 PLNP26678 52 aa10.49□□□□□ -0.73
SCN1B-202ENST00000415950 ERVK11-1P61568 191 aa10.49□□□□□ -0.73
SCN1B-202ENST00000415950 RNF182Q8N6D2 247 aa10.49□□□□□ -0.73
SCN1B-202ENST00000415950 C20orf144Q9BQM9 153 aa10.49□□□□□ -0.73
SCN1B-202ENST00000415950 GGTLC3B5MD39 225 aa10.49□□□□□ -0.73
SCN1B-202ENST00000415950 SLC25A39Q9BZJ4 359 aaPredicted RBP10.49□□□□□ -0.73
SCN1B-202ENST00000415950 TRAV21A0A0B4J279 112 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 GAGE2BQ13066 116 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 KIR3DS1Q14943 382 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 GAGE2EQ4V326 116 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 MS4A6AQ9H2W1 248 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 PGPEP1Q9NXJ5 209 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 GAGE2DQ9UEU5 116 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 TMEM8BA6NDV4 472 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 IGLV3-1P01715 115 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 CD28P10747 220 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 NDPQ00604 133 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 TMEM219Q86XT9 240 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 ETV2O00321 342 aaPredicted RBP10.48□□□□□ -0.73
SCN1B-202ENST00000415950 TMEM249Q2WGJ8 235 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 ORMDL2Q53FV1 153 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 SLC50A1Q9BRV3 221 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 ERG28Q9UKR5 140 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 NTN3O00634 580 aaPredicted RBP10.48□□□□□ -0.73
SCN1B-202ENST00000415950 ZNF474Q6S9Z5 364 aaPredicted RBP10.48□□□□□ -0.73
SCN1B-202ENST00000415950 FAM57AQ8TBR7 257 aa10.48□□□□□ -0.73
SCN1B-202ENST00000415950 RNASE6Q93091 150 aaKnown RBP10.48□□□□□ -0.73
SCN1B-202ENST00000415950 TRBV6-6A0A0A6YYG2 114 aa10.47□□□□□ -0.73
SCN1B-202ENST00000415950 ZNF134P52741 427 aa10.47□□□□□ -0.73
SCN1B-202ENST00000415950 ZC2HC1AQ96GY0 325 aa10.47□□□□□ -0.73
SCN1B-202ENST00000415950 VWC2Q2TAL6 325 aa10.47□□□□□ -0.73
SCN1B-202ENST00000415950 C15orf32Q32M92 178 aa10.47□□□□□ -0.73
SCN1B-202ENST00000415950 OR9G4Q8NGQ1 327 aa10.47□□□□□ -0.73
SCN1B-202ENST00000415950 SSC4DQ8WTU2 575 aa10.47□□□□□ -0.73
SCN1B-202ENST00000415950 COX11Q9Y6N1 276 aa10.47□□□□□ -0.73
SCN1B-202ENST00000415950 KLRD1Q13241 179 aa10.47□□□□□ -0.73
SCN1B-202ENST00000415950 LY6HO94772 140 aa10.46□□□□□ -0.73
SCN1B-202ENST00000415950 TMEM155Q4W5P6 130 aa10.46□□□□□ -0.73
SCN1B-202ENST00000415950 MRPS18CQ9Y3D5 142 aaKnown RBP10.46□□□□□ -0.73
SCN1B-202ENST00000415950 K7EN84 100 aa10.46□□□□□ -0.73
SCN1B-202ENST00000415950 SLC25A15Q9Y619 301 aa10.46□□□□□ -0.73
SCN1B-202ENST00000415950 PF4P02776 101 aa10.46□□□□□ -0.74
SCN1B-202ENST00000415950 ZNF876PQ49A33 203 aa10.46□□□□□ -0.74
SCN1B-202ENST00000415950 TMEM200BQ69YZ2 307 aa10.46□□□□□ -0.74
SCN1B-202ENST00000415950 Q6ZR03 302 aa10.46□□□□□ -0.74
SCN1B-202ENST00000415950 C14orf178Q8N769 122 aaPredicted RBP10.46□□□□□ -0.74
SCN1B-202ENST00000415950 TMEM158Q8WZ71 300 aa10.46□□□□□ -0.74
SCN1B-202ENST00000415950 CCL19Q99731 98 aa10.46□□□□□ -0.74
SCN1B-202ENST00000415950 MMP23AO75900 390 aa10.46□□□□□ -0.74
SCN1B-202ENST00000415950 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.45□□□□□ -0.74
SCN1B-202ENST00000415950 ZNF688P0C7X2 276 aa10.45□□□□□ -0.74
SCN1B-202ENST00000415950 LAGE3Q14657 143 aa10.45□□□□□ -0.74
SCN1B-202ENST00000415950 PSG3Q16557 428 aa10.45□□□□□ -0.74
SCN1B-202ENST00000415950 PRSS57Q6UWY2 283 aa10.45□□□□□ -0.74
SCN1B-202ENST00000415950 V9GYV3 84 aa10.45□□□□□ -0.74
SCN1B-202ENST00000415950 ARMS2P0C7Q2 107 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms