RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 C5orf38Q86SI9 138 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 NFE4Q86UQ8 179 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 SLC25A29Q8N8R3 303 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 NKAPP1Q8N9T2 125 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 LINC01555Q8NAE3 123 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 OR8B3Q8NGG8 313 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 TSKUQ8WUA8 353 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 GEMIN6Q8WXD5 167 aaKnown RBP2.69□□□□□ -1.98
SF3B1-203ENST00000414174 VSIG2Q96IQ7 327 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 PGLYRP2Q96PD5 576 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 MGST2Q99735 147 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 GABARAPL3Q9BY60 117 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 ZNF492Q9P255 531 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 TMEM131Q92545 1883 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 KCPQ6ZWJ8 1503 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 XRN1Q8IZH2 1706 aaKnown RBP2.68□□□□□ -1.98
SF3B1-203ENST00000414174 CITO14578 2027 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 TRAV17A0A0B4J275 112 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 IGHV3-20A0A0C4DH32 117 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 IGKV1-9A0A0C4DH69 117 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 MDFIC2A0A1B0GVS7 189 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 hADV29S1A0JD25 119 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 C19orf84I3L1E1 186 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 HLA-DPB1P04440 258 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 LINC00271P0C7V0 271 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 INAFM2P0DMQ5 153 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 RBMY1FQ15415 496 aaKnown RBP2.68□□□□□ -1.98
SF3B1-203ENST00000414174 ZNF876PQ49A33 203 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 LINC01554Q52M75 96 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 MIC13Q5XKP0 118 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 SUMO4Q6EEV6 95 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 C7orf65Q6ZTY9 151 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 LINC00173Q6ZV60 143 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 MARCH3Q86UD3 253 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 TMEM256Q8N2U0 113 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 SERP2Q8N6R1 65 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.68□□□□□ -1.98
SF3B1-203ENST00000414174 DIRC1Q969H9 104 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 ODF3Q96PU9 254 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 TMEM243Q9BU79 118 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 PARP12Q9H0J9 701 aaKnown RBP2.68□□□□□ -1.98
SF3B1-203ENST00000414174 SCRT2Q9NQ03 307 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 MANBALQ9NQG1 85 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 COL1A1P02452 1464 aaPredicted RBP2.68□□□□□ -1.98
SF3B1-203ENST00000414174 MYO10Q9HD67 2058 aa2.68□□□□□ -1.98
SF3B1-203ENST00000414174 AHDC1Q5TGY3 1603 aaPredicted RBP2.68□□□□□ -1.98
SF3B1-203ENST00000414174 TANC1Q9C0D5 1861 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 IGHV1OR15-1A0A075B7D0 117 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 TRAV2A0A0B4J234 112 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 IGHV4-61A0A0C4DH41 118 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 C9JCJ5 164 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 IGHV4-59P01825 116 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 C3orf79P0CE67 100 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 IGHV3-43DP0DP04 118 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 COX8AP10176 69 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 PTHLHP12272 177 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 AQP1P29972 269 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 RNASE4P34096 147 aaKnown RBP2.67□□□□□ -1.98
SF3B1-203ENST00000414174 KRTDAPP60985 99 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 PSMG4Q5JS54 123 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 C12orf73Q69YU5 71 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 C2orf91Q6ZV80 131 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 HMGN2P46Q86SG4 172 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 ZNF584Q8IVC4 421 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 FLVCR1-AS1Q8TAF5 88 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 AQP3Q92482 292 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 OR8B2Q96RD0 313 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 TRGV9Q99603 122 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 CST11Q9H112 138 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 CXCL16Q9H2A7 254 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 EPDR1Q9UM22 224 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 ZNF706Q9Y5V0 76 aaPredicted RBP2.67□□□□□ -1.98
SF3B1-203ENST00000414174 SLC25A15Q9Y619 301 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 LY96Q9Y6Y9 160 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 CDC42BPBQ9Y5S2 1711 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 MAP3K4Q9Y6R4 1608 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 TRPM2O94759 1503 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 AGLP35573 1532 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 ASXL1Q8IXJ9 1541 aa2.67□□□□□ -1.98
SF3B1-203ENST00000414174 SCN1AP35498 2009 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 FANCMQ8IYD8 2048 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 RGPD1P0DJD0 1748 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.66□□□□□ -1.98
SF3B1-203ENST00000414174 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.66□□□□□ -1.98
SF3B1-203ENST00000414174 LOC285095A0A1B0GVY8 99 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 A0A1B0GW54 56 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 IBA57-AS1B1ANH7 110 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 K7ERJ3 54 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 CCL16O15467 120 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 TIMM17BO60830 172 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 SLC25A14O95258 325 aaPredicted RBP2.66□□□□□ -1.98
SF3B1-203ENST00000414174 PRM2P04554 102 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 CCL4P13236 92 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 IGHV1-2P23083 117 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 S100A4P26447 101 aaKnown RBP2.66□□□□□ -1.98
SF3B1-203ENST00000414174 LINC00205P59089 165 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 FGF12P61328 243 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 UBE2G1P62253 170 aa2.66□□□□□ -1.98
SF3B1-203ENST00000414174 SNRPFP62306 86 aaKnown RBP2.66□□□□□ -1.98
SF3B1-203ENST00000414174 SS18Q15532 418 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms