RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 DOCK10Q96BY6 2186 aa13.49□□□□□ -0.25
PCDHA13-202ENST00000409494 SRSF1Q07955 248 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDHA13-202ENST00000409494 DMRTA1Q5VZB9 504 aa13.49□□□□□ -0.25
PCDHA13-202ENST00000409494 PAX9P55771 341 aa13.49□□□□□ -0.25
PCDHA13-202ENST00000409494 CREBBPQ92793 2442 aa13.49□□□□□ -0.25
PCDHA13-202ENST00000409494 ZNF688P0C7X2 276 aa13.48□□□□□ -0.25
PCDHA13-202ENST00000409494 DNLZQ5SXM8 178 aa13.48□□□□□ -0.25
PCDHA13-202ENST00000409494 GLMPQ8WWB7 406 aa13.48□□□□□ -0.25
PCDHA13-202ENST00000409494 OTOGLQ3ZCN5 2332 aa13.48□□□□□ -0.25
PCDHA13-202ENST00000409494 ST6GALNAC6Q969X2 333 aa13.48□□□□□ -0.25
PCDHA13-202ENST00000409494 IFI27P40305 119 aaPredicted RBP13.48□□□□□ -0.25
PCDHA13-202ENST00000409494 MEIG1Q5JSS6 88 aa13.48□□□□□ -0.25
PCDHA13-202ENST00000409494 ZNF106Q9H2Y7 1883 aaKnown RBP13.48□□□□□ -0.25
PCDHA13-202ENST00000409494 OVOL3O00110 214 aa13.48□□□□□ -0.25
PCDHA13-202ENST00000409494 KLK15Q9H2R5 256 aa13.48□□□□□ -0.25
PCDHA13-202ENST00000409494 C7orf71A4D174 169 aa13.47□□□□□ -0.25
PCDHA13-202ENST00000409494 C10orf142B7Z368 130 aa13.47□□□□□ -0.25
PCDHA13-202ENST00000409494 CA1P00915 261 aaPredicted RBP13.47□□□□□ -0.25
PCDHA13-202ENST00000409494 PLP1P60201 277 aa13.47□□□□□ -0.25
PCDHA13-202ENST00000409494 TMEM256Q8N2U0 113 aa13.47□□□□□ -0.25
PCDHA13-202ENST00000409494 LINC00205P59089 165 aa13.47□□□□□ -0.25
PCDHA13-202ENST00000409494 TRAV9-2A0A087WT02 112 aa13.47□□□□□ -0.25
PCDHA13-202ENST00000409494 CYSLTR1Q9Y271 337 aa13.47□□□□□ -0.25
PCDHA13-202ENST00000409494 FBLN7Q53RD9 439 aa13.47□□□□□ -0.25
PCDHA13-202ENST00000409494 HIST1H4GQ99525 98 aa13.47□□□□□ -0.25
PCDHA13-202ENST00000409494 VPREB3Q9UKI3 123 aa13.46□□□□□ -0.25
PCDHA13-202ENST00000409494 C22orf46C9J442 243 aa13.46□□□□□ -0.25
PCDHA13-202ENST00000409494 C10orf105Q8TEF2 133 aa13.46□□□□□ -0.25
PCDHA13-202ENST00000409494 MRPL27Q9P0M9 148 aaKnown RBP13.46□□□□□ -0.25
PCDHA13-202ENST00000409494 PIEZO1Q92508 2521 aa13.46□□□□□ -0.25
PCDHA13-202ENST00000409494 CRXO43186 299 aaPredicted RBP13.46□□□□□ -0.26
PCDHA13-202ENST00000409494 SEM1Q6ZVN7 128 aa13.46□□□□□ -0.26
PCDHA13-202ENST00000409494 NUDT10Q8NFP7 164 aa13.45□□□□□ -0.26
PCDHA13-202ENST00000409494 NUDT11Q96G61 164 aa13.45□□□□□ -0.26
PCDHA13-202ENST00000409494 SYNJ2BPP57105 145 aa13.45□□□□□ -0.26
PCDHA13-202ENST00000409494 Q8NA96 180 aa13.45□□□□□ -0.26
PCDHA13-202ENST00000409494 SRRM4A7MD48 611 aaKnown RBP13.45□□□□□ -0.26
PCDHA13-202ENST00000409494 EMP1P54849 157 aa13.45□□□□□ -0.26
PCDHA13-202ENST00000409494 RCHY1Q96PM5 261 aa13.45□□□□□ -0.26
PCDHA13-202ENST00000409494 HTN3P15516 51 aa13.45□□□□□ -0.26
PCDHA13-202ENST00000409494 TTC9CQ8N5M4 171 aa13.45□□□□□ -0.26
PCDHA13-202ENST00000409494 C18orf15Q96N68 181 aa13.45□□□□□ -0.26
PCDHA13-202ENST00000409494 LINC00614P0C842 121 aa13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 GRNP28799 593 aaKnown RBP13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 CHCHD1Q96BP2 118 aaKnown RBP13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 VCX2Q9H322 139 aa13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 MUC21A0A0G2JKD1 596 aa13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 MUC21A0A140T8X8 626 aa13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 PFN1P07737 140 aaKnown RBP13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 RPL36AP83881 106 aaKnown RBP13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 TMEM170BQ5T4T1 132 aa13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 EXOC3-AS1Q8N2X6 119 aa13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 RPL36ALQ969Q0 106 aaKnown RBP13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 TMEM14CQ9P0S9 112 aa13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 DOPEY2Q9Y3R5 2298 aa13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 PCP4P48539 62 aa13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 CTSZQ9UBR2 303 aa13.44□□□□□ -0.26
PCDHA13-202ENST00000409494 YLPM1P49750 1951 aaKnown RBP13.43□□□□□ -0.26
PCDHA13-202ENST00000409494 HBDP02042 147 aa13.43□□□□□ -0.26
PCDHA13-202ENST00000409494 GZMBP10144 247 aa13.43□□□□□ -0.26
PCDHA13-202ENST00000409494 DUX4L9Q6RFH8 374 aaPredicted RBP13.43□□□□□ -0.26
PCDHA13-202ENST00000409494 IGKV2-40A0A087WW87 121 aaPredicted RBP13.43□□□□□ -0.26
PCDHA13-202ENST00000409494 SNAI2O43623 268 aa13.43□□□□□ -0.26
PCDHA13-202ENST00000409494 IGKV2D-40P01614 121 aaPredicted RBP13.43□□□□□ -0.26
PCDHA13-202ENST00000409494 FAM231BA6NCW3 169 aa13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 IGKV1-39P01597 117 aa13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 IGKV1D-39P04432 117 aa13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 NIT1Q86X76 327 aa13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 SHANK1Q9Y566 2161 aa13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 H3BVH4 76 aa13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 FCN3O75636 299 aa13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 LYPD6Q86Y78 171 aa13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 DPH3P1Q9H4G8 78 aa13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 ZNF256Q9Y2P7 627 aaPredicted RBP13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 LOC107984156A0A0G2JMH3 177 aa13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 HOXB4P17483 251 aaPredicted RBP13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 ARL17AQ8IVW1 177 aa13.42□□□□□ -0.26
PCDHA13-202ENST00000409494 RHODO00212 210 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 TMEM249Q2WGJ8 235 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 CFAP161Q6P656 301 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 ZNF664Q8N3J9 261 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 LYPD6BQ8NI32 183 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 GFRA4Q9GZZ7 299 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 TMEM160Q9NX00 188 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 KIAA1549LQ6ZVL6 1849 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 TMEM131Q92545 1883 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 GHRHP01286 108 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 IGHV4-39P01824 125 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 SMIM13P0DJ93 91 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 ZNF134P52741 427 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 THAP8Q8NA92 274 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 SMPXQ9UHP9 88 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 NDUFS6O75380 124 aaKnown RBP13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 MMP23AO75900 390 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 SEC11AP67812 179 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 ZNF726P1Q15940 193 aa13.41□□□□□ -0.26
PCDHA13-202ENST00000409494 TMEM75Q8N9X5 138 aa13.4□□□□□ -0.26
PCDHA13-202ENST00000409494 NDPQ00604 133 aa13.4□□□□□ -0.26
PCDHA13-202ENST00000409494 LRRC75A-AS1Q8N1F1 130 aa13.4□□□□□ -0.26
PCDHA13-202ENST00000409494 ZNF492Q9P255 531 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms