RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 C17orf58Q2M2W7 97 aa20.18■□□□□ 0.82
SPIRE1-202ENST00000409402 CST9LQ9H4G1 147 aa20.18■□□□□ 0.82
SPIRE1-202ENST00000409402 KIAA1671Q9BY89 1806 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 JPT2Q9H910 190 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 XCL2Q9UBD3 114 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 GBF1Q92538 1859 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 C10orf126Q8N4M7 172 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 LINC00311Q8N616 119 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 PHLDA1Q8WV24 401 aaPredicted RBP20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 TANC1Q9C0D5 1861 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 TRAV8-1A0A0A6YYK1 113 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 TYMSP04818 313 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 DUX4L9Q6RFH8 374 aaPredicted RBP20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 Q6ZRM9 215 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 CSTL1Q9H114 145 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 TRAV9-2A0A087WT02 112 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 IGKV1-6A0A0C4DH72 117 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 C1orf159Q96HA4 380 aa20.17■□□□□ 0.82
SPIRE1-202ENST00000409402 ZNF503-AS2A6NEH8 195 aa20.16■□□□□ 0.82
SPIRE1-202ENST00000409402 NDUFA4L2Q9NRX3 87 aa20.16■□□□□ 0.82
SPIRE1-202ENST00000409402 TMEM14BQ9NUH8 114 aa20.16■□□□□ 0.82
SPIRE1-202ENST00000409402 SPCS1Q9Y6A9 102 aa20.16■□□□□ 0.82
SPIRE1-202ENST00000409402 SLX1AQ9BQ83 275 aa20.16■□□□□ 0.82
SPIRE1-202ENST00000409402 DAD1P61803 113 aa20.16■□□□□ 0.82
SPIRE1-202ENST00000409402 WDR86Q86TI4 376 aa20.16■□□□□ 0.82
SPIRE1-202ENST00000409402 HEATR1Q9H583 2144 aaKnown RBP20.16■□□□□ 0.82
SPIRE1-202ENST00000409402 SPTBN1Q01082 2364 aaKnown RBP20.15■□□□□ 0.82
SPIRE1-202ENST00000409402 IGHV4-39P01824 125 aa20.15■□□□□ 0.82
SPIRE1-202ENST00000409402 MST1LQ2TV78 715 aa20.15■□□□□ 0.82
SPIRE1-202ENST00000409402 NHP2Q9NX24 153 aaKnown RBP20.15■□□□□ 0.82
SPIRE1-202ENST00000409402 Q86TA4 180 aa20.15■□□□□ 0.82
SPIRE1-202ENST00000409402 DEFB104AQ8WTQ1 72 aa20.15■□□□□ 0.82
SPIRE1-202ENST00000409402 A0A087WWL8 130 aa20.15■□□□□ 0.82
SPIRE1-202ENST00000409402 PLEKHB2Q96CS7 222 aa20.15■□□□□ 0.82
SPIRE1-202ENST00000409402 APOC4P55056 127 aa20.14■□□□□ 0.82
SPIRE1-202ENST00000409402 C5orf30Q96GV9 206 aa20.14■□□□□ 0.82
SPIRE1-202ENST00000409402 SS18Q15532 418 aa20.14■□□□□ 0.81
SPIRE1-202ENST00000409402 DIDO1Q9BTC0 2240 aaKnown RBP20.14■□□□□ 0.81
SPIRE1-202ENST00000409402 TMEM238C9JI98 176 aa20.13■□□□□ 0.81
SPIRE1-202ENST00000409402 FAM90A2PQ658T7 463 aa20.13■□□□□ 0.81
SPIRE1-202ENST00000409402 NUP35Q8NFH5 326 aa20.13■□□□□ 0.81
SPIRE1-202ENST00000409402 HOXA3O43365 443 aaPredicted RBP20.13■□□□□ 0.81
SPIRE1-202ENST00000409402 C6orf226Q5I0X4 101 aa20.13■□□□□ 0.81
SPIRE1-202ENST00000409402 IGF2-ASQ6U949 168 aa20.13■□□□□ 0.81
SPIRE1-202ENST00000409402 NDUFA4O00483 81 aa20.13■□□□□ 0.81
SPIRE1-202ENST00000409402 F5H768 121 aa20.13■□□□□ 0.81
SPIRE1-202ENST00000409402 TRBV24-1A0A075B6N3 115 aa20.12■□□□□ 0.81
SPIRE1-202ENST00000409402 TCTEX1D4Q5JR98 221 aa20.12■□□□□ 0.81
SPIRE1-202ENST00000409402 MS4A6AQ9H2W1 248 aa20.12■□□□□ 0.81
SPIRE1-202ENST00000409402 POLEQ07864 2286 aa20.12■□□□□ 0.81
SPIRE1-202ENST00000409402 CFPP27918 469 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 C1orf194Q5T5A4 169 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 PAX4O43316 350 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 DKK1O94907 266 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 WISP1O95388 367 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 HIST1H2BKO60814 126 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 HIST1H2BJP06899 126 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 HIST1H2BOP23527 126 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 HIST1H2BBP33778 126 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 HIST1H2BDP58876 126 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 HIST1H2BCP62807 126 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 HIST2H2BEQ16778 126 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 HIST1H2BHQ93079 126 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 HIST1H2BNQ99877 126 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 HIST1H2BMQ99879 126 aa20.11■□□□□ 0.81
SPIRE1-202ENST00000409402 SPINK13Q1W4C9 94 aa20.1■□□□□ 0.81
SPIRE1-202ENST00000409402 OR2K2Q8NGT1 345 aa20.1■□□□□ 0.81
SPIRE1-202ENST00000409402 TSC2P49815 1807 aa20.1■□□□□ 0.81
SPIRE1-202ENST00000409402 M0R2P5 195 aa20.1■□□□□ 0.81
SPIRE1-202ENST00000409402 RHODO00212 210 aa20.1■□□□□ 0.81
SPIRE1-202ENST00000409402 ARMS2P0C7Q2 107 aa20.09■□□□□ 0.81
SPIRE1-202ENST00000409402 LIME1Q9H400 295 aa20.09■□□□□ 0.81
SPIRE1-202ENST00000409402 ELANEP08246 267 aa20.09■□□□□ 0.81
SPIRE1-202ENST00000409402 SPOCK3Q9BQ16 436 aa20.09■□□□□ 0.81
SPIRE1-202ENST00000409402 ABCA4P78363 2273 aa20.09■□□□□ 0.81
SPIRE1-202ENST00000409402 GGTLC3B5MD39 225 aa20.09■□□□□ 0.81
SPIRE1-202ENST00000409402 TMEM75Q8N9X5 138 aa20.09■□□□□ 0.81
SPIRE1-202ENST00000409402 TRPT1Q86TN4 253 aaKnown RBP20.09■□□□□ 0.81
SPIRE1-202ENST00000409402 KAAG1Q9UBP8 84 aa20.09■□□□□ 0.81
SPIRE1-202ENST00000409402 SHISA9B4DS77 424 aa20.08■□□□□ 0.81
SPIRE1-202ENST00000409402 DMRTC2Q8IXT2 367 aaPredicted RBP20.08■□□□□ 0.81
SPIRE1-202ENST00000409402 TRAV13-1A0A0B4J241 112 aa20.08■□□□□ 0.81
SPIRE1-202ENST00000409402 H3BUT2 72 aa20.08■□□□□ 0.81
SPIRE1-202ENST00000409402 WT1P19544 449 aaPredicted RBP20.08■□□□□ 0.81
SPIRE1-202ENST00000409402 SFTA2Q6UW10 78 aa20.08■□□□□ 0.81
SPIRE1-202ENST00000409402 FER1L5A0AVI2 2057 aa20.08■□□□□ 0.8
SPIRE1-202ENST00000409402 LAMTOR2Q9Y2Q5 125 aa20.08■□□□□ 0.8
SPIRE1-202ENST00000409402 WDR81Q562E7 1941 aa20.08■□□□□ 0.8
SPIRE1-202ENST00000409402 DEFB113Q30KQ7 82 aa20.07■□□□□ 0.8
SPIRE1-202ENST00000409402 PRR31Q5SQ13 230 aa20.07■□□□□ 0.8
SPIRE1-202ENST00000409402 IGHV2-5P01817 119 aa20.07■□□□□ 0.8
SPIRE1-202ENST00000409402 LYL1P12980 280 aa20.07■□□□□ 0.8
SPIRE1-202ENST00000409402 DOCK8Q8NF50 2099 aa20.07■□□□□ 0.8
SPIRE1-202ENST00000409402 K7EM74 188 aa20.07■□□□□ 0.8
SPIRE1-202ENST00000409402 SRSF4Q08170 494 aaKnown RBP20.06■□□□□ 0.8
SPIRE1-202ENST00000409402 IGFL2Q6UWQ7 119 aa20.06■□□□□ 0.8
SPIRE1-202ENST00000409402 TMEM95Q3KNT9 176 aa20.06■□□□□ 0.8
SPIRE1-202ENST00000409402 CFHR3Q02985 330 aa20.05■□□□□ 0.8
SPIRE1-202ENST00000409402 GFRA4Q9GZZ7 299 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms