RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 IGKV1-6A0A0C4DH72 117 aa11.34□□□□□ -0.59
ITGA6-202ENST00000409080 CA1P00915 261 aaPredicted RBP11.34□□□□□ -0.59
ITGA6-202ENST00000409080 IGHV3-53P01767 116 aa11.34□□□□□ -0.59
ITGA6-202ENST00000409080 LINC00205P59089 165 aa11.34□□□□□ -0.59
ITGA6-202ENST00000409080 MYLKQ15746 1914 aa11.34□□□□□ -0.59
ITGA6-202ENST00000409080 ZNF25P17030 456 aaPredicted RBP11.34□□□□□ -0.59
ITGA6-202ENST00000409080 C5orf24Q7Z6I8 188 aa11.34□□□□□ -0.59
ITGA6-202ENST00000409080 LINC00587B1AMM8 73 aa11.33□□□□□ -0.59
ITGA6-202ENST00000409080 SLC25A20O43772 301 aa11.33□□□□□ -0.59
ITGA6-202ENST00000409080 FOXE3Q13461 319 aa11.33□□□□□ -0.59
ITGA6-202ENST00000409080 ZGRF1Q86YA3 2104 aa11.33□□□□□ -0.59
ITGA6-202ENST00000409080 Q8NA96 180 aa11.33□□□□□ -0.59
ITGA6-202ENST00000409080 AGMATQ9BSE5 352 aa11.33□□□□□ -0.59
ITGA6-202ENST00000409080 XCL2Q9UBD3 114 aa11.33□□□□□ -0.59
ITGA6-202ENST00000409080 HBDP02042 147 aa11.33□□□□□ -0.6
ITGA6-202ENST00000409080 RPL24P83731 157 aaKnown RBP11.33□□□□□ -0.6
ITGA6-202ENST00000409080 ZNF876PQ49A33 203 aa11.33□□□□□ -0.6
ITGA6-202ENST00000409080 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
ITGA6-202ENST00000409080 ZNF524Q96C55 264 aa11.33□□□□□ -0.6
ITGA6-202ENST00000409080 IMMP2LQ96T52 175 aa11.33□□□□□ -0.6
ITGA6-202ENST00000409080 F5H768 121 aa11.33□□□□□ -0.6
ITGA6-202ENST00000409080 CKS1BP61024 79 aa11.33□□□□□ -0.6
ITGA6-202ENST00000409080 TMEM86BQ8N661 226 aa11.33□□□□□ -0.6
ITGA6-202ENST00000409080 NUDT11Q96G61 164 aa11.33□□□□□ -0.6
ITGA6-202ENST00000409080 CBY1Q9Y3M2 126 aa11.33□□□□□ -0.6
ITGA6-202ENST00000409080 RSPO1Q2MKA7 263 aaPredicted RBP11.33□□□□□ -0.6
ITGA6-202ENST00000409080 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.32□□□□□ -0.6
ITGA6-202ENST00000409080 SH2D1AO60880 128 aa11.32□□□□□ -0.6
ITGA6-202ENST00000409080 LGALS1P09382 135 aaKnown RBP11.32□□□□□ -0.6
ITGA6-202ENST00000409080 FABP2P12104 132 aa11.32□□□□□ -0.6
ITGA6-202ENST00000409080 TTC9CQ8N5M4 171 aa11.32□□□□□ -0.6
ITGA6-202ENST00000409080 VSIRQ9H7M9 311 aa11.32□□□□□ -0.6
ITGA6-202ENST00000409080 CCL24O00175 119 aa11.32□□□□□ -0.6
ITGA6-202ENST00000409080 APOMO95445 188 aa11.32□□□□□ -0.6
ITGA6-202ENST00000409080 IGLV3-1P01715 115 aa11.32□□□□□ -0.6
ITGA6-202ENST00000409080 CTSZQ9UBR2 303 aa11.32□□□□□ -0.6
ITGA6-202ENST00000409080 LY96Q9Y6Y9 160 aa11.32□□□□□ -0.6
ITGA6-202ENST00000409080 VCYO14598 125 aa11.32□□□□□ -0.6
ITGA6-202ENST00000409080 RIPPLY3P57055 190 aa11.32□□□□□ -0.6
ITGA6-202ENST00000409080 TRBV7-9A0A0J9YWB2 115 aa11.31□□□□□ -0.6
ITGA6-202ENST00000409080 RNF182Q8N6D2 247 aa11.31□□□□□ -0.6
ITGA6-202ENST00000409080 TRAV9-2A0A087WT02 112 aa11.31□□□□□ -0.6
ITGA6-202ENST00000409080 MPDZO75970 2070 aa11.31□□□□□ -0.6
ITGA6-202ENST00000409080 COL4A4P53420 1690 aaPredicted RBP11.31□□□□□ -0.6
ITGA6-202ENST00000409080 BDP1A6H8Y1 2624 aa11.31□□□□□ -0.6
ITGA6-202ENST00000409080 IGHV7-4-1A0A0J9YVY3 117 aa11.31□□□□□ -0.6
ITGA6-202ENST00000409080 RMI2Q96E14 147 aa11.31□□□□□ -0.6
ITGA6-202ENST00000409080 FAM208BQ5VWN6 2430 aa11.31□□□□□ -0.6
ITGA6-202ENST00000409080 IGHV3-73A0A0B4J1V6 119 aa11.3□□□□□ -0.6
ITGA6-202ENST00000409080 CENPVL3A0A0U1RRI6 287 aa11.3□□□□□ -0.6
ITGA6-202ENST00000409080 Q8TAT8 98 aa11.3□□□□□ -0.6
ITGA6-202ENST00000409080 ST6GALNAC6Q969X2 333 aa11.3□□□□□ -0.6
ITGA6-202ENST00000409080 PCNX1Q96RV3 2341 aa11.3□□□□□ -0.6
ITGA6-202ENST00000409080 LHBP01229 141 aa11.3□□□□□ -0.6
ITGA6-202ENST00000409080 MORN3Q6PF18 240 aaPredicted RBP11.3□□□□□ -0.6
ITGA6-202ENST00000409080 GNB1LQ9BYB4 327 aa11.29□□□□□ -0.6
ITGA6-202ENST00000409080 ERCC8Q13216 396 aa11.29□□□□□ -0.6
ITGA6-202ENST00000409080 RASL11AQ6T310 242 aa11.29□□□□□ -0.6
ITGA6-202ENST00000409080 ANAPC10Q9UM13 185 aa11.29□□□□□ -0.6
ITGA6-202ENST00000409080 IGKV3D-20A0A0C4DH25 116 aa11.29□□□□□ -0.6
ITGA6-202ENST00000409080 LAGE3Q14657 143 aa11.29□□□□□ -0.6
ITGA6-202ENST00000409080 SS18Q15532 418 aa11.29□□□□□ -0.6
ITGA6-202ENST00000409080 RPP25LQ8N5L8 163 aaKnown RBP11.29□□□□□ -0.6
ITGA6-202ENST00000409080 A0A0G2JRQ6 117 aa11.29□□□□□ -0.6
ITGA6-202ENST00000409080 NDUFA3O95167 84 aa11.29□□□□□ -0.6
ITGA6-202ENST00000409080 RPLP1P05386 114 aaKnown RBP11.29□□□□□ -0.6
ITGA6-202ENST00000409080 LINC00469Q8N7U9 141 aa11.29□□□□□ -0.6
ITGA6-202ENST00000409080 C1orf147Q96MC9 270 aaPredicted RBP11.29□□□□□ -0.6
ITGA6-202ENST00000409080 JKAMPQ9P055 326 aa11.29□□□□□ -0.6
ITGA6-202ENST00000409080 LOXL1Q08397 574 aaPredicted RBP11.28□□□□□ -0.6
ITGA6-202ENST00000409080 SLAQ13239 276 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 COL5A1-AS1Q5SY13 56 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 LYZL1Q6UWQ5 148 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 SEM1Q6ZVN7 128 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 Q6ZRM9 215 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 MMP23AO75900 390 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 IGHV4-38-2P0DP08 117 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 CDKN1BP46527 198 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 POU2AF1Q16633 256 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 TEX48A0A1B0GUV7 120 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 GTF3C1Q12789 2109 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 IGFL4Q6B9Z1 124 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 ATP6V0BQ99437 205 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 LRRK1Q38SD2 2015 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 TEX43Q6ZNM6 134 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 TMEM75Q8N9X5 138 aa11.28□□□□□ -0.6
ITGA6-202ENST00000409080 CHCHD1Q96BP2 118 aaKnown RBP11.28□□□□□ -0.6
ITGA6-202ENST00000409080 SSBP4Q9BWG4 385 aaPredicted RBP11.28□□□□□ -0.6
ITGA6-202ENST00000409080 YLPM1P49750 1951 aaKnown RBP11.27□□□□□ -0.6
ITGA6-202ENST00000409080 WNK2Q9Y3S1 2297 aa11.27□□□□□ -0.6
ITGA6-202ENST00000409080 A8MWV9 139 aa11.27□□□□□ -0.6
ITGA6-202ENST00000409080 MLANAQ16655 118 aa11.27□□□□□ -0.6
ITGA6-202ENST00000409080 SPINK13Q1W4C9 94 aa11.27□□□□□ -0.6
ITGA6-202ENST00000409080 NRGNQ92686 78 aa11.27□□□□□ -0.6
ITGA6-202ENST00000409080 A0A1B0GW64 132 aa11.27□□□□□ -0.61
ITGA6-202ENST00000409080 EVI2AP22794 236 aa11.27□□□□□ -0.61
ITGA6-202ENST00000409080 C8orf86Q6ZUL3 223 aa11.27□□□□□ -0.61
ITGA6-202ENST00000409080 C11orf53Q8IXP5 236 aa11.27□□□□□ -0.61
ITGA6-202ENST00000409080 CHTOPQ9Y3Y2 248 aaKnown RBP11.27□□□□□ -0.61
ITGA6-202ENST00000409080 DPM2O94777 84 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms