RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 MBD3L2Q8NHZ7 208 aaPredicted RBP8.7□□□□□ -1.02
PBRM1-205ENST00000409057 Q8TAT8 98 aa8.7□□□□□ -1.02
PBRM1-205ENST00000409057 CHAC1Q9BUX1 264 aa8.7□□□□□ -1.02
PBRM1-205ENST00000409057 ZNF492Q9P255 531 aa8.7□□□□□ -1.02
PBRM1-205ENST00000409057 IGHG3P01860 377 aa8.7□□□□□ -1.02
PBRM1-205ENST00000409057 OCIAD2Q56VL3 154 aa8.7□□□□□ -1.02
PBRM1-205ENST00000409057 C9orf139Q6ZV77 190 aa8.7□□□□□ -1.02
PBRM1-205ENST00000409057 GAFA1Q96PS6 74 aa8.7□□□□□ -1.02
PBRM1-205ENST00000409057 WNT2P09544 360 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 PRTN3P24158 256 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 CST9LQ9H4G1 147 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 COL4A6Q14031 1691 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 ARFGEF3Q5TH69 2177 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 IGHV3-64A0A075B6Q5 118 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 VCYO14598 125 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 WISP1O95388 367 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 Q6ZWC4 215 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 IGKV1-16P04430 117 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 C5orf64Q2M2E5 130 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 TRAV41A0A0B4J266 112 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 GGTLC3B5MD39 225 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 ARMS2P0C7Q2 107 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 PGPEP1Q9NXJ5 209 aa8.69□□□□□ -1.02
PBRM1-205ENST00000409057 LMO1P25800 156 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 IL15RAQ13261 267 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 PDE6HQ13956 83 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 STPG4Q8N801 248 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 ZNF524Q96C55 264 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 CYYR1Q96J86 154 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 LINC00477Q96M19 166 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 GTF3C1Q12789 2109 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 MGAMO43451 1857 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 ADAMTSL5Q6ZMM2 481 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 A0A0U1RRA0 63 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 SMKR1H3BMG3 65 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 PF4P02776 101 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 NPSP0C0P6 89 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 ZNF876PQ49A33 203 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 TMEM14BQ9NUH8 114 aa8.68□□□□□ -1.02
PBRM1-205ENST00000409057 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-205ENST00000409057 SLC25A20O43772 301 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 MMP23AO75900 390 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 MINOS1Q5TGZ0 78 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 VOPP1Q96AW1 172 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 SHANK2-AS3Q9BTD1 123 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 LSM4Q9Y4Z0 139 aaKnown RBP8.67□□□□□ -1.02
PBRM1-205ENST00000409057 MINOS1-NBL1R4GNA1 71 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 VDAC2P45880 294 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-205ENST00000409057 GAGE1Q13065 139 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 Q6ZS92 163 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 FAM231DQ6ZW35 169 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 NLRC5Q86WI3 1866 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 IGKV1-39P01597 117 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 IGKV1D-39P04432 117 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 TMEM155Q4W5P6 130 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 SRSF8Q9BRL6 282 aaKnown RBP8.67□□□□□ -1.02
PBRM1-205ENST00000409057 LINC00527Q9UJ94 153 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 V9GYV3 84 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 MALRD1Q5VYJ5 2156 aa8.67□□□□□ -1.02
PBRM1-205ENST00000409057 SRRM4A7MD48 611 aaKnown RBP8.66□□□□□ -1.02
PBRM1-205ENST00000409057 BUB1B-PAK6H3BSN5 160 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 SSBP2P81877 361 aaPredicted RBP8.66□□□□□ -1.02
PBRM1-205ENST00000409057 ZNF474Q6S9Z5 364 aaPredicted RBP8.66□□□□□ -1.02
PBRM1-205ENST00000409057 C2orf82Q6UX34 121 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 LYPD6BQ8NI32 183 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 PRSS22Q9GZN4 317 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 YLPM1P49750 1951 aaKnown RBP8.66□□□□□ -1.02
PBRM1-205ENST00000409057 TRAV40A0A0B4J280 105 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 TMEM86BQ8N661 226 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 NOTCH4Q99466 2003 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 A0A0G2JNJ9 132 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 TNFRSF6BO95407 300 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 ZNF562Q6V9R5 426 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 VMO1Q7Z5L0 202 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 STHQ8IWL8 128 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 C14orf178Q8N769 122 aaPredicted RBP8.66□□□□□ -1.02
PBRM1-205ENST00000409057 CSTL1Q9H114 145 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 Q9UFV3 132 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 HELZP42694 1942 aaKnown RBP8.66□□□□□ -1.02
PBRM1-205ENST00000409057 A0A1W2PPI3 338 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 PCNX2A6NKB5 2137 aa8.66□□□□□ -1.02
PBRM1-205ENST00000409057 PLXNA4Q9HCM2 1894 aa8.65□□□□□ -1.02
PBRM1-205ENST00000409057 SPINK8P0C7L1 97 aa8.65□□□□□ -1.02
PBRM1-205ENST00000409057 SRD5A1P18405 259 aa8.65□□□□□ -1.02
PBRM1-205ENST00000409057 KLRD1Q13241 179 aa8.65□□□□□ -1.02
PBRM1-205ENST00000409057 TRBV7-1A0A0A6YYK4 115 aa8.65□□□□□ -1.02
PBRM1-205ENST00000409057 IGLL1P15814 213 aa8.65□□□□□ -1.02
PBRM1-205ENST00000409057 FAM104BQ5XKR9 115 aa8.65□□□□□ -1.02
PBRM1-205ENST00000409057 TEX43Q6ZNM6 134 aa8.65□□□□□ -1.02
PBRM1-205ENST00000409057 KLF2Q9Y5W3 355 aaPredicted RBP8.65□□□□□ -1.02
PBRM1-205ENST00000409057 SLAQ13239 276 aa8.65□□□□□ -1.03
PBRM1-205ENST00000409057 LY6DQ14210 128 aa8.65□□□□□ -1.03
PBRM1-205ENST00000409057 TMEM75Q8N9X5 138 aa8.65□□□□□ -1.03
PBRM1-205ENST00000409057 WFDC12Q8WWY7 111 aa8.65□□□□□ -1.03
PBRM1-205ENST00000409057 C9orf118A6NHY6 69 aa8.64□□□□□ -1.03
PBRM1-205ENST00000409057 ADARB2-AS1A8MUL3 147 aa8.64□□□□□ -1.03
PBRM1-205ENST00000409057 TMEM249Q2WGJ8 235 aa8.64□□□□□ -1.03
PBRM1-205ENST00000409057 C11orf52Q96A22 123 aa8.64□□□□□ -1.03
PBRM1-205ENST00000409057 PROK2Q9HC23 129 aa8.64□□□□□ -1.03
PBRM1-205ENST00000409057 MALP21145 153 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms