RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 LINC00477Q96M19 166 aa10.77□□□□□ -0.69
CACNA1C-222ENST00000406454 NHP2Q9NX24 153 aaKnown RBP10.77□□□□□ -0.69
CACNA1C-222ENST00000406454 TRAV8-1A0A0A6YYK1 113 aa10.76□□□□□ -0.69
CACNA1C-222ENST00000406454 SMPXQ9UHP9 88 aa10.76□□□□□ -0.69
CACNA1C-222ENST00000406454 LAGE3Q14657 143 aa10.76□□□□□ -0.69
CACNA1C-222ENST00000406454 GBF1Q92538 1859 aa10.76□□□□□ -0.69
CACNA1C-222ENST00000406454 Q86TA4 180 aa10.76□□□□□ -0.69
CACNA1C-222ENST00000406454 PIP4P2Q8N4L2 257 aa10.76□□□□□ -0.69
CACNA1C-222ENST00000406454 TMEM14BQ9NUH8 114 aa10.76□□□□□ -0.69
CACNA1C-222ENST00000406454 CEP250Q9BV73 2442 aa10.76□□□□□ -0.69
CACNA1C-222ENST00000406454 LIME1Q9H400 295 aa10.76□□□□□ -0.69
CACNA1C-222ENST00000406454 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 LINC01356Q8N9X3 169 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 RHPN1-AS1Q9BWJ2 59 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 SPTBN2O15020 2390 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 IGLV1-44P01699 117 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 RCHY1Q96PM5 261 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 GTSCR1Q86UQ5 136 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 UBE2E1P51965 193 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 DMRTA1Q5VZB9 504 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 DUX4L9Q6RFH8 374 aaPredicted RBP10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 FCN3O75636 299 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 PAX9P55771 341 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 C17orf58Q2M2W7 97 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 ZNF833PQ6ZTB9 187 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 THADAQ6YHU6 1953 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 IGKV1-39P01597 117 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 IGKV1D-39P04432 117 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 LOXP28300 417 aaPredicted RBP10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 TMEM256Q8N2U0 113 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 SLC25A2Q9BXI2 301 aa10.75□□□□□ -0.69
CACNA1C-222ENST00000406454 NDUFA4L2Q9NRX3 87 aa10.74□□□□□ -0.69
CACNA1C-222ENST00000406454 TMEM8BA6NDV4 472 aa10.74□□□□□ -0.69
CACNA1C-222ENST00000406454 MS4A6AQ9H2W1 248 aa10.74□□□□□ -0.69
CACNA1C-222ENST00000406454 FAM110DQ8TAY7 271 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-222ENST00000406454 ORAOV1Q8WV07 137 aa10.74□□□□□ -0.69
CACNA1C-222ENST00000406454 PLCE1Q9P212 2302 aa10.74□□□□□ -0.69
CACNA1C-222ENST00000406454 CD300EQ496F6 205 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-222ENST00000406454 RNF182Q8N6D2 247 aa10.74□□□□□ -0.69
CACNA1C-222ENST00000406454 FAM215AQ9Y5M1 114 aa10.74□□□□□ -0.69
CACNA1C-222ENST00000406454 WNK1Q9H4A3 2382 aa10.73□□□□□ -0.69
CACNA1C-222ENST00000406454 MAJINQ3KP22 176 aa10.73□□□□□ -0.69
CACNA1C-222ENST00000406454 CST9LQ9H4G1 147 aa10.73□□□□□ -0.69
CACNA1C-222ENST00000406454 OVOL3O00110 214 aa10.73□□□□□ -0.69
CACNA1C-222ENST00000406454 IGLV3-1P01715 115 aa10.73□□□□□ -0.69
CACNA1C-222ENST00000406454 RUSC1-AS1Q66K80 236 aa10.73□□□□□ -0.69
CACNA1C-222ENST00000406454 CHCHD5Q9BSY4 110 aa10.73□□□□□ -0.69
CACNA1C-222ENST00000406454 TSC2P49815 1807 aa10.73□□□□□ -0.69
CACNA1C-222ENST00000406454 TEX36Q5VZQ5 186 aa10.73□□□□□ -0.69
CACNA1C-222ENST00000406454 TCF20Q9UGU0 1960 aaKnown RBP10.73□□□□□ -0.69
CACNA1C-222ENST00000406454 IGLV3-9A0A075B6K5 115 aa10.73□□□□□ -0.69
CACNA1C-222ENST00000406454 PDE6HQ13956 83 aa10.73□□□□□ -0.69
CACNA1C-222ENST00000406454 C9JQL5 133 aa10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 ATP6V0E1O15342 81 aa10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 MSMBP08118 114 aa10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 ZNF876PQ49A33 203 aa10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 LINC00479Q96M42 142 aa10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 DAZ1Q9NQZ3 744 aaKnown RBP10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 TRAV2A0A0B4J234 112 aa10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 MRPL27Q9P0M9 148 aaKnown RBP10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 GPR179Q6PRD1 2367 aa10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 CFHR2P36980 270 aa10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 YPEL3P61236 119 aaPredicted RBP10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 PAX2Q02962 417 aa10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 HSD52Q0P140 79 aa10.72□□□□□ -0.69
CACNA1C-222ENST00000406454 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.69
CACNA1C-222ENST00000406454 C15orf65H3BRN8 121 aa10.71□□□□□ -0.69
CACNA1C-222ENST00000406454 LINC00311Q8N616 119 aa10.71□□□□□ -0.69
CACNA1C-222ENST00000406454 NDUFB8O95169 186 aa10.71□□□□□ -0.69
CACNA1C-222ENST00000406454 CNOT1A5YKK6 2376 aaKnown RBP10.71□□□□□ -0.7
CACNA1C-222ENST00000406454 DMRTC2Q8IXT2 367 aaPredicted RBP10.71□□□□□ -0.7
CACNA1C-222ENST00000406454 C3orf79P0CE67 100 aa10.71□□□□□ -0.7
CACNA1C-222ENST00000406454 LCNL1Q6ZST4 164 aa10.71□□□□□ -0.7
CACNA1C-222ENST00000406454 PIP4P1Q86T03 277 aa10.71□□□□□ -0.7
CACNA1C-222ENST00000406454 BAALCQ8WXS3 180 aa10.71□□□□□ -0.7
CACNA1C-222ENST00000406454 PHF3Q92576 2039 aaKnown RBP10.71□□□□□ -0.7
CACNA1C-222ENST00000406454 IGHV3-73A0A0B4J1V6 119 aa10.71□□□□□ -0.7
CACNA1C-222ENST00000406454 KIF26BQ2KJY2 2108 aa10.71□□□□□ -0.7
CACNA1C-222ENST00000406454 KLHL30-AS1Q8NEE0 82 aa10.71□□□□□ -0.7
CACNA1C-222ENST00000406454 A6NNC1 897 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 GFRA4Q9GZZ7 299 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 CRPP02741 224 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 GATA3P23771 443 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 PLNP26678 52 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 ERCC8Q13216 396 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 SP5Q6BEB4 398 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 C14orf178Q8N769 122 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 WIPF3A6NGB9 483 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 FXYD7P58549 80 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 OR9G4Q8NGQ1 327 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 IGHV1-69DA0A0B4J2H0 117 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 NDUFS5O43920 106 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 IGHV1-69P01742 117 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 C1orf194Q5T5A4 169 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 UBE2E2Q96LR5 201 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 PRADC1Q9BSG0 188 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 INS-IGF2F8WCM5 200 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 INSP01308 110 aa10.7□□□□□ -0.7
CACNA1C-222ENST00000406454 IGHV2-70DA0A0C4DH43 119 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms