RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 CCL4P13236 92 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 CFHR2P36980 270 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 KLRD1Q13241 179 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 C20orf204Q6ZNR8 217 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 OR10J6PQ8NGY7 276 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 FOXI3A8MTJ6 420 aaPredicted RBP4.77□□□□□ -1.65
HDAC9-203ENST00000406072 GGTLC3B5MD39 225 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 GFRA3O60609 400 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 DNAL4O96015 105 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 MAGEA5P43359 124 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 CD69Q07108 199 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 FOXF2Q12947 444 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 FOXI1Q12951 378 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 PMVKQ15126 192 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 TMEM78Q5T7P6 136 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 LYZL1Q6UWQ5 148 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 GLMPQ8WWB7 406 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 TMEM158Q8WZ71 300 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 C1orf43Q9BWL3 253 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 SRXN1Q9BYN0 137 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 PROK2Q9HC23 129 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 PSG8Q9UQ74 426 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 TRAV3A0A0B4J244 114 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 C15orf61A6NNL5 157 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 FNDC10F2Z333 226 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 MT-ATP8P03928 68 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 DUTP33316 252 aaKnown RBP4.77□□□□□ -1.65
HDAC9-203ENST00000406072 SRSF2Q01130 221 aaKnown RBP4.77□□□□□ -1.65
HDAC9-203ENST00000406072 SRSF1Q07955 248 aaKnown RBP eCLIP4.77□□□□□ -1.65
HDAC9-203ENST00000406072 RRN3P1Q2M238 152 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 IGFL3Q6UXB1 125 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 ACP7Q6ZNF0 438 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 ZNF497Q6ZNH5 498 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 C11orf52Q96A22 123 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 NABP1Q96AH0 204 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 SIGLEC8Q9NYZ4 499 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 DKK2Q9UBU2 259 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 TP53TG3Q9ULZ0 132 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 PHLDA3Q9Y5J5 127 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 IGKV3-7A0A075B6H7 116 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 TCRBV4S1A1TA0A5B7 111 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 M0R381 172 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 COX7A1P24310 79 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 KLF5Q13887 457 aaPredicted RBP4.77□□□□□ -1.65
HDAC9-203ENST00000406072 MLANAQ16655 118 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 CENPVQ7Z7K6 275 aaPredicted RBP4.77□□□□□ -1.65
HDAC9-203ENST00000406072 ZNRF1Q8ND25 227 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 FGFBP3Q8TAT2 258 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 OTORQ9NRC9 128 aa4.77□□□□□ -1.65
HDAC9-203ENST00000406072 RANBP2P49792 3224 aaKnown RBP4.76□□□□□ -1.65
HDAC9-203ENST00000406072 C2orf70A6NJV1 201 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 NPIPB11E5RHQ5 1161 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 AGFG2O95081 481 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 TCRAP04437 139 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 CELA2AP08217 269 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 TNFAIP6P98066 277 aaPredicted RBP4.76□□□□□ -1.65
HDAC9-203ENST00000406072 Q0VFX4 171 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 SPINK14Q6IE38 97 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 MDS2Q8NDY4 140 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 HS3ST6Q96QI5 342 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 KIR2DL4Q99706 377 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 TTTY13Q9BZ97 58 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 EFNA2O43921 213 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 PLNP26678 52 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 LINC01559Q495D7 138 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 LINC01545Q5VT33 79 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 FOXL2NBQ6ZUU3 175 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 EXOC3-AS1Q8N2X6 119 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 NTN5Q8WTR8 489 aaPredicted RBP4.76□□□□□ -1.65
HDAC9-203ENST00000406072 CCL17Q92583 94 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 RNF114Q9Y508 228 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 EP300Q09472 2414 aaPredicted RBP4.76□□□□□ -1.65
HDAC9-203ENST00000406072 TRBV25-1A0A075B6N4 114 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 IGHV3-35A0A0C4DH35 117 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 LINC00473A8K010 186 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 SLC25A20O43772 301 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 TFF1P04155 84 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 CRYGSP22914 178 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 PLA2G5P39877 138 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 CIRBPQ14011 172 aaKnown RBP4.76□□□□□ -1.65
HDAC9-203ENST00000406072 ATXN8Q156A1 80 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 Q6ZS49 121 aa4.76□□□□□ -1.65
HDAC9-203ENST00000406072 OSR1Q8TAX0 266 aaPredicted RBP4.76□□□□□ -1.65
HDAC9-203ENST00000406072 KLF13Q9Y2Y9 288 aaPredicted RBP4.76□□□□□ -1.65
HDAC9-203ENST00000406072 RNASE1P07998 156 aaKnown RBP4.75□□□□□ -1.65
HDAC9-203ENST00000406072 GLRXP35754 106 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 C3orf36Q3SXR2 165 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 Q6ZUT4 128 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 FAM231DQ6ZW35 169 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 CCL13Q99616 98 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 PAPPA-AS1Q5QFB9 102 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 FAM53AQ6NSI3 398 aaPredicted RBP4.75□□□□□ -1.65
HDAC9-203ENST00000406072 FAM159AQ6UWV7 190 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 GCSAMQ8N6F7 178 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 OR11H6Q8NGC7 330 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 PTH2Q96A98 100 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 ASCL2Q99929 193 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 PRUNE2Q8WUY3 3088 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 TRGV5A0A0B4J1U4 118 aa4.75□□□□□ -1.65
HDAC9-203ENST00000406072 H3BMM0 161 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms