RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 TNFRSF18Q9Y5U5 241 aa10.21□□□□□ -0.77
SEC13-206ENST00000397102 A0A087X0K7 114 aa10.2□□□□□ -0.78
SEC13-206ENST00000397102 PRSS46E5RG02 174 aa10.2□□□□□ -0.78
SEC13-206ENST00000397102 NXPH4O95158 308 aa10.2□□□□□ -0.78
SEC13-206ENST00000397102 SHANK2-AS3Q9BTD1 123 aa10.2□□□□□ -0.78
SEC13-206ENST00000397102 IAPPP10997 89 aa10.19□□□□□ -0.78
SEC13-206ENST00000397102 VBP1P61758 197 aa10.19□□□□□ -0.78
SEC13-206ENST00000397102 KIR3DS1Q14943 382 aa10.19□□□□□ -0.78
SEC13-206ENST00000397102 RPUSD4Q96CM3 377 aaKnown RBP10.19□□□□□ -0.78
SEC13-206ENST00000397102 VCX3AQ9NNX9 186 aa10.19□□□□□ -0.78
SEC13-206ENST00000397102 PITX3O75364 302 aa10.18□□□□□ -0.78
SEC13-206ENST00000397102 PRB4P10163 310 aaPredicted RBP10.18□□□□□ -0.78
SEC13-206ENST00000397102 RAP2BP61225 183 aa10.18□□□□□ -0.78
SEC13-206ENST00000397102 SRPXP78539 464 aa10.18□□□□□ -0.78
SEC13-206ENST00000397102 HAMPP81172 84 aa10.18□□□□□ -0.78
SEC13-206ENST00000397102 DAZ2Q13117 558 aaKnown RBP10.18□□□□□ -0.78
SEC13-206ENST00000397102 GFI1BQ5VTD9 330 aa10.18□□□□□ -0.78
SEC13-206ENST00000397102 Q6ZTI0 123 aa10.18□□□□□ -0.78
SEC13-206ENST00000397102 TMED4Q7Z7H5 227 aa10.18□□□□□ -0.78
SEC13-206ENST00000397102 LRRC20Q8TCA0 184 aa10.18□□□□□ -0.78
SEC13-206ENST00000397102 AP3S1Q92572 193 aa10.18□□□□□ -0.78
SEC13-206ENST00000397102 PRRT1Q99946 306 aa10.18□□□□□ -0.78
SEC13-206ENST00000397102 HIGD1AQ9Y241 93 aa10.18□□□□□ -0.78
SEC13-206ENST00000397102 AKAIN1P0CW23 69 aa10.17□□□□□ -0.78
SEC13-206ENST00000397102 RPP30P78346 268 aaKnown RBP10.17□□□□□ -0.78
SEC13-206ENST00000397102 MRPS10P82664 201 aaKnown RBP10.17□□□□□ -0.78
SEC13-206ENST00000397102 AKR1C1Q04828 323 aa10.17□□□□□ -0.78
SEC13-206ENST00000397102 TMEM70Q9BUB7 260 aa10.17□□□□□ -0.78
SEC13-206ENST00000397102 PARD6GQ9BYG4 376 aaPredicted RBP10.17□□□□□ -0.78
SEC13-206ENST00000397102 TRGV2A0A075B6R0 118 aa10.16□□□□□ -0.78
SEC13-206ENST00000397102 ANXA3P12429 323 aa10.16□□□□□ -0.78
SEC13-206ENST00000397102 OR51S1Q8NGJ8 323 aa10.16□□□□□ -0.78
SEC13-206ENST00000397102 SCGB3A2Q96PL1 93 aa10.16□□□□□ -0.78
SEC13-206ENST00000397102 CIB3Q96Q77 187 aaPredicted RBP10.16□□□□□ -0.78
SEC13-206ENST00000397102 FUNDC2Q9BWH2 189 aa10.16□□□□□ -0.78
SEC13-206ENST00000397102 ICOSQ9Y6W8 199 aa10.16□□□□□ -0.78
SEC13-206ENST00000397102 TRAV9-2A0A087WT02 112 aa10.15□□□□□ -0.78
SEC13-206ENST00000397102 PIGBOS1A0A0B4J2F0 54 aa10.15□□□□□ -0.78
SEC13-206ENST00000397102 DUXBA0A1W2PPF3 345 aa10.15□□□□□ -0.78
SEC13-206ENST00000397102 KRTAP29-1A8MX34 341 aaPredicted RBP10.15□□□□□ -0.78
SEC13-206ENST00000397102 HYPMO75409 117 aa10.15□□□□□ -0.78
SEC13-206ENST00000397102 MED6O75586 246 aa10.15□□□□□ -0.78
SEC13-206ENST00000397102 IL5P05113 134 aa10.15□□□□□ -0.78
SEC13-206ENST00000397102 CXCL2P19875 107 aa10.15□□□□□ -0.78
SEC13-206ENST00000397102 PLP1P60201 277 aa10.15□□□□□ -0.78
SEC13-206ENST00000397102 CYP2G1PQ6ZSU1 146 aa10.15□□□□□ -0.78
SEC13-206ENST00000397102 ACOT7LQ6ZUV0 252 aa10.15□□□□□ -0.78
SEC13-206ENST00000397102 CCDC190Q86UF4 302 aa10.15□□□□□ -0.78
SEC13-206ENST00000397102 PYGO2Q9BRQ0 406 aa10.15□□□□□ -0.78
SEC13-206ENST00000397102 A0A087WXM4 84 aa10.14□□□□□ -0.79
SEC13-206ENST00000397102 ATP6V1G2O95670 118 aa10.14□□□□□ -0.79
SEC13-206ENST00000397102 OR5G3P0C626 314 aa10.14□□□□□ -0.79
SEC13-206ENST00000397102 LINC00869P0C866 280 aa10.14□□□□□ -0.79
SEC13-206ENST00000397102 LCN15Q6UWW0 184 aa10.14□□□□□ -0.79
SEC13-206ENST00000397102 S100A7AQ86SG5 101 aa10.14□□□□□ -0.79
SEC13-206ENST00000397102 CLVS1Q8IUQ0 354 aaPredicted RBP10.14□□□□□ -0.79
SEC13-206ENST00000397102 SMIM4Q8WVI0 70 aa10.14□□□□□ -0.79
SEC13-206ENST00000397102 SLC50A1Q9BRV3 221 aa10.14□□□□□ -0.79
SEC13-206ENST00000397102 ZNF331Q9NQX6 463 aaPredicted RBP10.14□□□□□ -0.79
SEC13-206ENST00000397102 MSRB1Q9NZV6 116 aa10.14□□□□□ -0.79
SEC13-206ENST00000397102 UBR4Q5T4S7 5183 aa10.14□□□□□ -0.79
SEC13-206ENST00000397102 PMS2P5A8MQ11 134 aa10.13□□□□□ -0.79
SEC13-206ENST00000397102 K7EP13 123 aa10.13□□□□□ -0.79
SEC13-206ENST00000397102 MRPS12O15235 138 aaKnown RBP10.13□□□□□ -0.79
SEC13-206ENST00000397102 PAX4O43316 350 aa10.13□□□□□ -0.79
SEC13-206ENST00000397102 SYNGR2O43760 224 aa10.13□□□□□ -0.79
SEC13-206ENST00000397102 ZNF324O75467 553 aaPredicted RBP10.13□□□□□ -0.79
SEC13-206ENST00000397102 SLC25A6P12236 298 aa10.13□□□□□ -0.79
SEC13-206ENST00000397102 SERTAD4-AS1Q5TG53 156 aa10.13□□□□□ -0.79
SEC13-206ENST00000397102 LINC00467Q9BRT7 94 aa10.13□□□□□ -0.79
SEC13-206ENST00000397102 SCP2D1Q9UJQ7 156 aa10.13□□□□□ -0.79
SEC13-206ENST00000397102 RNF24Q9Y225 148 aa10.13□□□□□ -0.79
SEC13-206ENST00000397102 LY96Q9Y6Y9 160 aa10.13□□□□□ -0.79
SEC13-206ENST00000397102 IGLV5-52A0A0A0MRZ9 124 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 TRAV12-3A0A0B4J271 114 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 NPIPB6E9PJ23 425 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 J3KRW8 73 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 WRBO00258 174 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 SELENOTP62341 195 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 SPANXN5Q5MJ07 72 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 LYPD5Q6UWN5 251 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 C11orf72Q8NBR9 251 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 ZNF680Q8NEM1 530 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 ODF3Q96PU9 254 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 GSN-AS1Q9NRJ2 163 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 FUT9Q9Y231 359 aa10.12□□□□□ -0.79
SEC13-206ENST00000397102 TRGV1A0A0A0MS02 117 aa10.11□□□□□ -0.79
SEC13-206ENST00000397102 SMCO3A2RU48 225 aa10.11□□□□□ -0.79
SEC13-206ENST00000397102 PRAC2D3DTV9 90 aa10.11□□□□□ -0.79
SEC13-206ENST00000397102 ANXA7P20073 488 aaKnown RBP10.11□□□□□ -0.79
SEC13-206ENST00000397102 LEPP41159 167 aa10.11□□□□□ -0.79
SEC13-206ENST00000397102 SYT8Q8NBV8 401 aa10.11□□□□□ -0.79
SEC13-206ENST00000397102 NTN5Q8WTR8 489 aaPredicted RBP10.11□□□□□ -0.79
SEC13-206ENST00000397102 MIXL1Q9H2W2 232 aa10.11□□□□□ -0.79
SEC13-206ENST00000397102 HMCN2Q8NDA2 5059 aa10.11□□□□□ -0.79
SEC13-206ENST00000397102 ANKRD20A5PA0PJZ0 165 aa10.1□□□□□ -0.79
SEC13-206ENST00000397102 H3BP45 60 aa10.1□□□□□ -0.79
SEC13-206ENST00000397102 CTDSPLO15194 276 aa10.1□□□□□ -0.79
SEC13-206ENST00000397102 PLA2G1BP04054 148 aaKnown RBP10.1□□□□□ -0.79
SEC13-206ENST00000397102 PATE2Q6UY27 113 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms