RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 GLMPQ8WWB7 406 aa12.58□□□□□ -0.4
GNE-202ENST00000396594 TCF20Q9UGU0 1960 aaKnown RBP12.58□□□□□ -0.4
GNE-202ENST00000396594 D6R8Y8 96 aa12.57□□□□□ -0.4
GNE-202ENST00000396594 Q6ZR03 302 aa12.57□□□□□ -0.4
GNE-202ENST00000396594 C11orf52Q96A22 123 aa12.57□□□□□ -0.4
GNE-202ENST00000396594 COLCA2A8K830 154 aa12.57□□□□□ -0.4
GNE-202ENST00000396594 EMP1P54849 157 aa12.57□□□□□ -0.4
GNE-202ENST00000396594 HIST3H2BBQ8N257 126 aa12.57□□□□□ -0.4
GNE-202ENST00000396594 SH2D6Q7Z4S9 175 aa12.57□□□□□ -0.4
GNE-202ENST00000396594 EXOC3-AS1Q8N2X6 119 aa12.57□□□□□ -0.4
GNE-202ENST00000396594 DKK4Q9UBT3 224 aa12.57□□□□□ -0.4
GNE-202ENST00000396594 SCN2AQ99250 2005 aa12.56□□□□□ -0.4
GNE-202ENST00000396594 A0A1B0GV72 72 aa12.56□□□□□ -0.4
GNE-202ENST00000396594 IGHV2-5P01817 119 aa12.56□□□□□ -0.4
GNE-202ENST00000396594 DMRTC2Q8IXT2 367 aaPredicted RBP12.56□□□□□ -0.4
GNE-202ENST00000396594 CHAC1Q9BUX1 264 aa12.56□□□□□ -0.4
GNE-202ENST00000396594 BRD3OSQ6XYD6 125 aa12.56□□□□□ -0.4
GNE-202ENST00000396594 LIME1Q9H400 295 aa12.56□□□□□ -0.4
GNE-202ENST00000396594 PGPEP1Q9NXJ5 209 aa12.56□□□□□ -0.4
GNE-202ENST00000396594 FBXL19-AS1Q494R0 122 aa12.56□□□□□ -0.4
GNE-202ENST00000396594 PYGO2Q9BRQ0 406 aa12.56□□□□□ -0.4
GNE-202ENST00000396594 ATOH7Q8N100 152 aa12.56□□□□□ -0.4
GNE-202ENST00000396594 IGKV1-6A0A0C4DH72 117 aa12.55□□□□□ -0.4
GNE-202ENST00000396594 LEPROTO15243 131 aa12.55□□□□□ -0.4
GNE-202ENST00000396594 FCN3O75636 299 aa12.55□□□□□ -0.4
GNE-202ENST00000396594 TFF1P04155 84 aa12.55□□□□□ -0.4
GNE-202ENST00000396594 MST1LQ2TV78 715 aa12.55□□□□□ -0.4
GNE-202ENST00000396594 Q8N8P6 123 aa12.55□□□□□ -0.4
GNE-202ENST00000396594 DKK1O94907 266 aa12.55□□□□□ -0.4
GNE-202ENST00000396594 IGHV1OR15-1A0A075B7D0 117 aa12.55□□□□□ -0.4
GNE-202ENST00000396594 OVOL3O00110 214 aa12.55□□□□□ -0.4
GNE-202ENST00000396594 CR1LQ2VPA4 569 aa12.55□□□□□ -0.4
GNE-202ENST00000396594 HIST1H2BLQ99880 126 aa12.55□□□□□ -0.4
GNE-202ENST00000396594 RNF223E7ERA6 249 aa12.54□□□□□ -0.4
GNE-202ENST00000396594 FAM19A2Q8N3H0 131 aa12.54□□□□□ -0.4
GNE-202ENST00000396594 LOC102724200A0A096LPH7 203 aaPredicted RBP12.54□□□□□ -0.4
GNE-202ENST00000396594 Q96MF0 132 aa12.54□□□□□ -0.4
GNE-202ENST00000396594 GSN-AS1Q9NRJ2 163 aa12.54□□□□□ -0.4
GNE-202ENST00000396594 IGHV3OR16-8A0A075B7F1 116 aa12.54□□□□□ -0.4
GNE-202ENST00000396594 TRAV12-3A0A0B4J271 114 aa12.54□□□□□ -0.4
GNE-202ENST00000396594 LGALS1P09382 135 aaKnown RBP12.54□□□□□ -0.4
GNE-202ENST00000396594 FOXI2Q6ZQN5 318 aa12.54□□□□□ -0.4
GNE-202ENST00000396594 CSTL1Q9H114 145 aa12.54□□□□□ -0.4
GNE-202ENST00000396594 VPREB3Q9UKI3 123 aa12.54□□□□□ -0.4
GNE-202ENST00000396594 I3L3M4 83 aa12.54□□□□□ -0.4
GNE-202ENST00000396594 RNASE1P07998 156 aaKnown RBP12.54□□□□□ -0.4
GNE-202ENST00000396594 KLHDC3Q9BQ90 382 aa12.54□□□□□ -0.4
GNE-202ENST00000396594 REG4Q9BYZ8 158 aa12.54□□□□□ -0.4
GNE-202ENST00000396594 HEATR5BQ9P2D3 2071 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 LINC00158P58513 81 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 NPBQ8NG41 125 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 C20orf78Q9BR46 151 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 TSSC4Q9Y5U2 329 aaPredicted RBP12.53□□□□□ -0.4
GNE-202ENST00000396594 TRBV25-1A0A075B6N4 114 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 IGHV7-4-1A0A0J9YVY3 117 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 C5orf63A6NC05 138 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 TMEM158Q8WZ71 300 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 C14orf144Q96I85 54 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 F8WEM9 126 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 INS-IGF2F8WCM5 200 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 CDKN1BP46527 198 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 IGKV1-16P04430 117 aa12.53□□□□□ -0.4
GNE-202ENST00000396594 ANAPC1Q9H1A4 1944 aa12.52□□□□□ -0.4
GNE-202ENST00000396594 JPT2Q9H910 190 aa12.52□□□□□ -0.4
GNE-202ENST00000396594 EREGO14944 169 aa12.52□□□□□ -0.41
GNE-202ENST00000396594 FSTL3O95633 263 aa12.52□□□□□ -0.41
GNE-202ENST00000396594 ZNF479Q96JC4 524 aa12.52□□□□□ -0.41
GNE-202ENST00000396594 ARHGEF17Q96PE2 2063 aaPredicted RBP12.52□□□□□ -0.41
GNE-202ENST00000396594 VWC2Q2TAL6 325 aa12.52□□□□□ -0.41
GNE-202ENST00000396594 SYNJ2BPP57105 145 aa12.51□□□□□ -0.41
GNE-202ENST00000396594 TIMM21Q9BVV7 248 aa12.51□□□□□ -0.41
GNE-202ENST00000396594 SHISA9B4DS77 424 aa12.51□□□□□ -0.41
GNE-202ENST00000396594 MMP23AO75900 390 aa12.51□□□□□ -0.41
GNE-202ENST00000396594 DEFB131AP59861 70 aa12.51□□□□□ -0.41
GNE-202ENST00000396594 LINC01545Q5VT33 79 aa12.51□□□□□ -0.41
GNE-202ENST00000396594 FAM104BQ5XKR9 115 aa12.51□□□□□ -0.41
GNE-202ENST00000396594 A0A0G2JRQ6 117 aa12.51□□□□□ -0.41
GNE-202ENST00000396594 SYS1-DBNDD2H3BUS1 97 aa12.51□□□□□ -0.41
GNE-202ENST00000396594 WDR86Q86TI4 376 aa12.51□□□□□ -0.41
GNE-202ENST00000396594 TRAV2A0A0B4J234 112 aa12.5□□□□□ -0.41
GNE-202ENST00000396594 LHBP01229 141 aa12.5□□□□□ -0.41
GNE-202ENST00000396594 Q6ZRM9 215 aa12.5□□□□□ -0.41
GNE-202ENST00000396594 HS3ST6Q96QI5 342 aa12.5□□□□□ -0.41
GNE-202ENST00000396594 KIF26BQ2KJY2 2108 aa12.5□□□□□ -0.41
GNE-202ENST00000396594 SRSF3P84103 164 aaKnown RBP12.5□□□□□ -0.41
GNE-202ENST00000396594 NHP2Q9NX24 153 aaKnown RBP12.5□□□□□ -0.41
GNE-202ENST00000396594 TRAV25A0A0B4J276 109 aa12.5□□□□□ -0.41
GNE-202ENST00000396594 DAD1P61803 113 aa12.5□□□□□ -0.41
GNE-202ENST00000396594 SRSF6Q13247 344 aaKnown RBP12.5□□□□□ -0.41
GNE-202ENST00000396594 TDGF1P3P51864 188 aa12.49□□□□□ -0.41
GNE-202ENST00000396594 ARMS2P0C7Q2 107 aa12.49□□□□□ -0.41
GNE-202ENST00000396594 C6orf226Q5I0X4 101 aa12.49□□□□□ -0.41
GNE-202ENST00000396594 C8orf86Q6ZUL3 223 aa12.49□□□□□ -0.41
GNE-202ENST00000396594 LSM4Q9Y4Z0 139 aaKnown RBP12.49□□□□□ -0.41
GNE-202ENST00000396594 TNFRSF6BO95407 300 aa12.49□□□□□ -0.41
GNE-202ENST00000396594 AHCTF1Q8WYP5 2266 aa12.49□□□□□ -0.41
GNE-202ENST00000396594 A0A1B0GV90 55 aa12.49□□□□□ -0.41
GNE-202ENST00000396594 TAL2Q16559 108 aa12.49□□□□□ -0.41
GNE-202ENST00000396594 DEFB113Q30KQ7 82 aa12.49□□□□□ -0.41
GNE-202ENST00000396594 ATRAIDQ6UW56 229 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms