RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 RPUSD4Q96CM3 377 aaKnown RBP14.63□□□□□ -0.07
TRAF4-203ENST00000394925 A0A087X0K7 114 aa14.62□□□□□ -0.07
TRAF4-203ENST00000394925 ZNF701M0R085 212 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-203ENST00000394925 HOXB5P09067 269 aa14.62□□□□□ -0.07
TRAF4-203ENST00000394925 LINC00869P0C866 280 aa14.62□□□□□ -0.07
TRAF4-203ENST00000394925 BTF3P20290 206 aaKnown RBP14.62□□□□□ -0.07
TRAF4-203ENST00000394925 ZNF503Q96F45 646 aa14.62□□□□□ -0.07
TRAF4-203ENST00000394925 UPK3BQ9BT76 320 aa14.62□□□□□ -0.07
TRAF4-203ENST00000394925 H7BYZ3 331 aa14.61□□□□□ -0.07
TRAF4-203ENST00000394925 ADAP1O75689 374 aa14.61□□□□□ -0.07
TRAF4-203ENST00000394925 HOXA5P20719 270 aa14.61□□□□□ -0.07
TRAF4-203ENST00000394925 KIR3DS1Q14943 382 aa14.61□□□□□ -0.07
TRAF4-203ENST00000394925 ZNF586Q9NXT0 402 aa14.61□□□□□ -0.07
TRAF4-203ENST00000394925 A0A1W2PPQ1 181 aa14.6□□□□□ -0.07
TRAF4-203ENST00000394925 GAGE12BA1L429 117 aa14.6□□□□□ -0.07
TRAF4-203ENST00000394925 GAGE7O76087 117 aa14.6□□□□□ -0.07
TRAF4-203ENST00000394925 GAGE12FP0CL80 117 aa14.6□□□□□ -0.07
TRAF4-203ENST00000394925 GAGE12GP0CL81 117 aa14.6□□□□□ -0.07
TRAF4-203ENST00000394925 GAGE12IP0CL82 117 aa14.6□□□□□ -0.07
TRAF4-203ENST00000394925 FAUP35544 74 aaKnown RBP14.6□□□□□ -0.07
TRAF4-203ENST00000394925 PLP1P60201 277 aa14.6□□□□□ -0.07
TRAF4-203ENST00000394925 LINC00612Q8N6U2 182 aa14.6□□□□□ -0.07
TRAF4-203ENST00000394925 DYNC2LI1Q8TCX1 351 aa14.6□□□□□ -0.07
TRAF4-203ENST00000394925 PARD6GQ9BYG4 376 aaPredicted RBP14.6□□□□□ -0.07
TRAF4-203ENST00000394925 CCDC59Q9P031 241 aaKnown RBP14.6□□□□□ -0.07
TRAF4-203ENST00000394925 DMBT1Q9UGM3 2413 aaPredicted RBP14.59□□□□□ -0.07
TRAF4-203ENST00000394925 FABP12A6NFH5 140 aa14.59□□□□□ -0.07
TRAF4-203ENST00000394925 SFT2D2O95562 160 aa14.59□□□□□ -0.07
TRAF4-203ENST00000394925 ANXA7P20073 488 aaKnown RBP14.59□□□□□ -0.07
TRAF4-203ENST00000394925 CCDC28AQ8IWP9 274 aa14.59□□□□□ -0.07
TRAF4-203ENST00000394925 SOSTQ9BQB4 213 aa14.59□□□□□ -0.07
TRAF4-203ENST00000394925 ARL6Q9H0F7 186 aa14.59□□□□□ -0.07
TRAF4-203ENST00000394925 MRPS16Q9Y3D3 137 aaKnown RBP14.59□□□□□ -0.07
TRAF4-203ENST00000394925 PMS2P5A8MQ11 134 aa14.58□□□□□ -0.08
TRAF4-203ENST00000394925 EPM2AB3EWF7 344 aa14.58□□□□□ -0.08
TRAF4-203ENST00000394925 RLN2P04090 185 aa14.58□□□□□ -0.08
TRAF4-203ENST00000394925 SNRPCP09234 159 aaKnown RBP14.58□□□□□ -0.08
TRAF4-203ENST00000394925 SELENOTP62341 195 aa14.58□□□□□ -0.08
TRAF4-203ENST00000394925 PPP1R1AQ13522 171 aa14.58□□□□□ -0.08
TRAF4-203ENST00000394925 C20orf144Q9BQM9 153 aa14.58□□□□□ -0.08
TRAF4-203ENST00000394925 MRPS12O15235 138 aaKnown RBP14.57□□□□□ -0.08
TRAF4-203ENST00000394925 TNFSF8P32971 234 aa14.57□□□□□ -0.08
TRAF4-203ENST00000394925 RRAS2P62070 204 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-203ENST00000394925 POLR2GP62487 172 aaKnown RBP eCLIP14.57□□□□□ -0.08
TRAF4-203ENST00000394925 PATE2Q6UY27 113 aa14.57□□□□□ -0.08
TRAF4-203ENST00000394925 S100A7AQ86SG5 101 aa14.57□□□□□ -0.08
TRAF4-203ENST00000394925 PSENENQ9NZ42 101 aa14.57□□□□□ -0.08
TRAF4-203ENST00000394925 SNURFLB1AK76 121 aa14.56□□□□□ -0.08
TRAF4-203ENST00000394925 GFI1BQ5VTD9 330 aa14.56□□□□□ -0.08
TRAF4-203ENST00000394925 CCDC190Q86UF4 302 aa14.56□□□□□ -0.08
TRAF4-203ENST00000394925 MRPS26Q9BYN8 205 aaKnown RBP14.56□□□□□ -0.08
TRAF4-203ENST00000394925 ARV1Q9H2C2 271 aa14.56□□□□□ -0.08
TRAF4-203ENST00000394925 ZNF331Q9NQX6 463 aaPredicted RBP14.56□□□□□ -0.08
TRAF4-203ENST00000394925 H3BNG1 76 aa14.55□□□□□ -0.08
TRAF4-203ENST00000394925 CCNKO75909 580 aa14.55□□□□□ -0.08
TRAF4-203ENST00000394925 LINC00315P59091 139 aa14.55□□□□□ -0.08
TRAF4-203ENST00000394925 ID3Q02535 119 aa14.55□□□□□ -0.08
TRAF4-203ENST00000394925 LCN15Q6UWW0 184 aa14.55□□□□□ -0.08
TRAF4-203ENST00000394925 TOMM5Q8N4H5 51 aa14.55□□□□□ -0.08
TRAF4-203ENST00000394925 SLC25A21Q9BQT8 299 aaPredicted RBP14.55□□□□□ -0.08
TRAF4-203ENST00000394925 TMPRSS5Q9H3S3 457 aa14.55□□□□□ -0.08
TRAF4-203ENST00000394925 PRAC2D3DTV9 90 aa14.54□□□□□ -0.08
TRAF4-203ENST00000394925 J3KRW8 73 aa14.54□□□□□ -0.08
TRAF4-203ENST00000394925 CXCL2P19875 107 aa14.54□□□□□ -0.08
TRAF4-203ENST00000394925 AP3S2P59780 193 aa14.54□□□□□ -0.08
TRAF4-203ENST00000394925 MCFD2Q8NI22 146 aa14.54□□□□□ -0.08
TRAF4-203ENST00000394925 RAB2BQ8WUD1 216 aa14.54□□□□□ -0.08
TRAF4-203ENST00000394925 TRIM63Q969Q1 353 aa14.54□□□□□ -0.08
TRAF4-203ENST00000394925 SLC50A1Q9BRV3 221 aa14.54□□□□□ -0.08
TRAF4-203ENST00000394925 NPVFQ9HCQ7 196 aa14.54□□□□□ -0.08
TRAF4-203ENST00000394925 RNF24Q9Y225 148 aa14.54□□□□□ -0.08
TRAF4-203ENST00000394925 H3BTX0 84 aa14.53□□□□□ -0.08
TRAF4-203ENST00000394925 SSSCA1O60232 199 aa14.53□□□□□ -0.08
TRAF4-203ENST00000394925 FUSP35637 526 aaKnown RBP eCLIP14.53□□□□□ -0.08
TRAF4-203ENST00000394925 SLC38A11Q08AI6 406 aa14.53□□□□□ -0.08
TRAF4-203ENST00000394925 SLIRPQ9GZT3 109 aaKnown RBP14.53□□□□□ -0.08
TRAF4-203ENST00000394925 METTL15P1P0C7V9 234 aa14.52□□□□□ -0.09
TRAF4-203ENST00000394925 INAFM2P0DMQ5 153 aa14.52□□□□□ -0.09
TRAF4-203ENST00000394925 PYDC2Q56P42 97 aa14.52□□□□□ -0.09
TRAF4-203ENST00000394925 Q6ZRN7 208 aaPredicted RBP14.52□□□□□ -0.09
TRAF4-203ENST00000394925 Q6ZTI0 123 aa14.52□□□□□ -0.09
TRAF4-203ENST00000394925 LINC00305Q7Z4B0 112 aa14.52□□□□□ -0.09
TRAF4-203ENST00000394925 A0A096LPF7 62 aa14.51□□□□□ -0.09
TRAF4-203ENST00000394925 TRAV12-3A0A0B4J271 114 aa14.51□□□□□ -0.09
TRAF4-203ENST00000394925 K7EPK0 472 aa14.51□□□□□ -0.09
TRAF4-203ENST00000394925 SLC17A3O00476 420 aa14.51□□□□□ -0.09
TRAF4-203ENST00000394925 TEPPQ6URK8 271 aa14.51□□□□□ -0.09
TRAF4-203ENST00000394925 VSIG2Q96IQ7 327 aa14.51□□□□□ -0.09
TRAF4-203ENST00000394925 SMIM8Q96KF7 97 aa14.51□□□□□ -0.09
TRAF4-203ENST00000394925 PGPEP1Q9NXJ5 209 aa14.51□□□□□ -0.09
TRAF4-203ENST00000394925 MGAT4CQ9UBM8 478 aa14.51□□□□□ -0.09
TRAF4-203ENST00000394925 FAT1Q14517 4588 aa14.5□□□□□ -0.09
TRAF4-203ENST00000394925 GOSR2O14653 212 aa14.5□□□□□ -0.09
TRAF4-203ENST00000394925 TMEM14EPQ6UXP3 125 aa14.5□□□□□ -0.09
TRAF4-203ENST00000394925 BPIFA4PQ86YQ2 179 aa14.5□□□□□ -0.09
TRAF4-203ENST00000394925 ZBTB8BQ8NAP8 495 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-203ENST00000394925 CT45A10P0DMU9 189 aa14.49□□□□□ -0.09
TRAF4-203ENST00000394925 TMBIM6P55061 237 aa14.49□□□□□ -0.09
TRAF4-203ENST00000394925 DAZ2Q13117 558 aaKnown RBP14.49□□□□□ -0.09
TRAF4-203ENST00000394925 PXDC1Q5TGL8 231 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms