RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 ZNF48Q96MX3 618 aaPredicted RBP11.08□□□□□ -0.64
RNF41-202ENST00000394013 MRPL18Q9H0U6 180 aaKnown RBP11.08□□□□□ -0.64
RNF41-202ENST00000394013 CLPSL1A2RUU4 121 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 ZNF705FA8MVS1 300 aaPredicted RBP11.07□□□□□ -0.64
RNF41-202ENST00000394013 GOSR1O95249 250 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 LTAP01374 205 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 IGHV4-59P01825 116 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 PAX1P15863 534 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 Q86TA4 180 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 CMTM2Q8TAZ6 248 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 MBD6Q96DN6 1003 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 GPR82Q96P67 336 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 ZFAND3Q9H8U3 227 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 NIT2Q9NQR4 276 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 GAR1Q9NY12 217 aaKnown RBP11.07□□□□□ -0.64
RNF41-202ENST00000394013 ACANP16112 2415 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 KMT2BQ9UMN6 2715 aaPredicted RBP11.07□□□□□ -0.64
RNF41-202ENST00000394013 SMIM27A0A1W2PRY6 76 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 A6NDX4 124 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 TGOLN2O43493 480 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 GATCO43716 136 aaKnown RBP11.07□□□□□ -0.64
RNF41-202ENST00000394013 RAB4BP61018 213 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 RPL19P84098 196 aaKnown RBP11.07□□□□□ -0.64
RNF41-202ENST00000394013 DEFB112Q30KQ8 113 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 C19orf54Q5BKX5 351 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 GDF5OSQ5U4N7 250 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 C10orf99Q6UWK7 81 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 BTF3L4Q96K17 158 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 TP53TG3Q9ULZ0 132 aa11.07□□□□□ -0.64
RNF41-202ENST00000394013 FLNAP21333 2647 aaKnown RBP11.06□□□□□ -0.64
RNF41-202ENST00000394013 IGKV2-40A0A087WW87 121 aaPredicted RBP11.06□□□□□ -0.64
RNF41-202ENST00000394013 IGKV2D-40P01614 121 aaPredicted RBP11.06□□□□□ -0.64
RNF41-202ENST00000394013 AMBPP02760 352 aa11.06□□□□□ -0.64
RNF41-202ENST00000394013 C8orf49Q96NF6 230 aa11.06□□□□□ -0.64
RNF41-202ENST00000394013 PITPNC1Q9UKF7 332 aa11.06□□□□□ -0.64
RNF41-202ENST00000394013 TRGV3P03979 118 aa11.06□□□□□ -0.64
RNF41-202ENST00000394013 NUP35Q8NFH5 326 aa11.06□□□□□ -0.64
RNF41-202ENST00000394013 VN1R17PQ8TDU5 208 aa11.06□□□□□ -0.64
RNF41-202ENST00000394013 NEU1Q99519 415 aa11.06□□□□□ -0.64
RNF41-202ENST00000394013 RABAC1Q9UI14 185 aa11.06□□□□□ -0.64
RNF41-202ENST00000394013 NF1P21359 2839 aa11.05□□□□□ -0.64
RNF41-202ENST00000394013 MYO9AB2RTY4 2548 aa11.05□□□□□ -0.64
RNF41-202ENST00000394013 TMEM183AQ8IXX5 376 aa11.05□□□□□ -0.64
RNF41-202ENST00000394013 RNF182Q8N6D2 247 aa11.05□□□□□ -0.64
RNF41-202ENST00000394013 ZC2HC1AQ96GY0 325 aa11.05□□□□□ -0.64
RNF41-202ENST00000394013 IGHG4P01861 327 aa11.04□□□□□ -0.64
RNF41-202ENST00000394013 S100A8P05109 93 aa11.04□□□□□ -0.64
RNF41-202ENST00000394013 S100A2P29034 98 aa11.04□□□□□ -0.64
RNF41-202ENST00000394013 LINC00310P59036 64 aa11.04□□□□□ -0.64
RNF41-202ENST00000394013 TMEM136Q6ZRR5 245 aa11.04□□□□□ -0.64
RNF41-202ENST00000394013 Q8TAT8 98 aa11.04□□□□□ -0.64
RNF41-202ENST00000394013 GTSF1Q8WW33 167 aa11.04□□□□□ -0.64
RNF41-202ENST00000394013 FMC1Q96HJ9 113 aa11.04□□□□□ -0.64
RNF41-202ENST00000394013 SSBP4Q9BWG4 385 aaPredicted RBP11.04□□□□□ -0.64
RNF41-202ENST00000394013 HIGD1CA8MV81 97 aa11.04□□□□□ -0.64
RNF41-202ENST00000394013 TPPP2P59282 170 aa11.04□□□□□ -0.64
RNF41-202ENST00000394013 LINC01356Q8N9X3 169 aa11.04□□□□□ -0.64
RNF41-202ENST00000394013 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
RNF41-202ENST00000394013 NAT8BQ9UHF3 227 aa11.04□□□□□ -0.64
RNF41-202ENST00000394013 DIRC3C9JPN6 131 aa11.03□□□□□ -0.64
RNF41-202ENST00000394013 CD33P20138 364 aa11.03□□□□□ -0.64
RNF41-202ENST00000394013 ATP5G2Q06055 141 aa11.03□□□□□ -0.64
RNF41-202ENST00000394013 UNQ9165/PRO28630Q6UXU0 137 aa11.03□□□□□ -0.64
RNF41-202ENST00000394013 PRAC2D3DTV9 90 aa11.03□□□□□ -0.64
RNF41-202ENST00000394013 S100A9P06702 114 aaKnown RBP11.03□□□□□ -0.64
RNF41-202ENST00000394013 SMIM6P0DI80 62 aa11.03□□□□□ -0.64
RNF41-202ENST00000394013 SLC25A16P16260 332 aa11.03□□□□□ -0.64
RNF41-202ENST00000394013 CAMPP49913 170 aa11.03□□□□□ -0.64
RNF41-202ENST00000394013 CRIP1P50238 77 aa11.03□□□□□ -0.64
RNF41-202ENST00000394013 Q5PR19 223 aa11.03□□□□□ -0.64
RNF41-202ENST00000394013 DUX5Q96PT3 197 aa11.03□□□□□ -0.64
RNF41-202ENST00000394013 C19orf71A6NCJ1 209 aa11.02□□□□□ -0.64
RNF41-202ENST00000394013 EDN2P20800 178 aa11.02□□□□□ -0.64
RNF41-202ENST00000394013 SSTP61278 116 aa11.02□□□□□ -0.64
RNF41-202ENST00000394013 SLAQ13239 276 aa11.02□□□□□ -0.64
RNF41-202ENST00000394013 FAM231DQ6ZW35 169 aa11.02□□□□□ -0.64
RNF41-202ENST00000394013 EEF1AKMT3Q96AZ1 226 aa11.02□□□□□ -0.64
RNF41-202ENST00000394013 VGLL1Q99990 258 aa11.02□□□□□ -0.64
RNF41-202ENST00000394013 PSG8Q9UQ74 426 aa11.02□□□□□ -0.64
RNF41-202ENST00000394013 AKAP9Q99996 3911 aa11.02□□□□□ -0.65
RNF41-202ENST00000394013 BUB3O43684 328 aa11.02□□□□□ -0.65
RNF41-202ENST00000394013 GRAMD2BQ96HH9 432 aa11.02□□□□□ -0.65
RNF41-202ENST00000394013 PGLYRP4Q96LB8 373 aa11.02□□□□□ -0.65
RNF41-202ENST00000394013 TXN2Q99757 166 aa11.02□□□□□ -0.65
RNF41-202ENST00000394013 TRAV20A0A0B4J274 112 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 IZUMO1RA6ND01 250 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 BMPR1BO00238 502 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 PF4V1P10720 104 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 PPIFP30405 207 aaKnown RBP11.01□□□□□ -0.65
RNF41-202ENST00000394013 PDZD2O15018 2839 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 IGHG2P01859 326 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 IGHV4-31P0DP07 118 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 DSCR9P59020 149 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 ERCC8Q13216 396 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 PSG3Q16557 428 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 HIST2H2BDQ6DRA6 164 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 IL17RELQ6ZVW7 336 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 Q96MF0 132 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 TCEAL7Q9BRU2 100 aa11.01□□□□□ -0.65
RNF41-202ENST00000394013 PRSS22Q9GZN4 317 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms