RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 COL8A1P27658 744 aa19.92■□□□□ 0.78
SMARCD3-203ENST00000392811 PKIAP61925 76 aa19.92■□□□□ 0.78
SMARCD3-203ENST00000392811 PIFOQ8TCI5 191 aa19.92■□□□□ 0.78
SMARCD3-203ENST00000392811 ASCL2Q99929 193 aa19.92■□□□□ 0.78
SMARCD3-203ENST00000392811 PRO1933Q9H354 126 aa19.92■□□□□ 0.78
SMARCD3-203ENST00000392811 IGHV3OR16-8A0A075B7F1 116 aa19.91■□□□□ 0.78
SMARCD3-203ENST00000392811 CAMPP49913 170 aa19.91■□□□□ 0.78
SMARCD3-203ENST00000392811 ZC2HC1AQ96GY0 325 aa19.91■□□□□ 0.78
SMARCD3-203ENST00000392811 ZFP30Q9Y2G7 519 aa19.91■□□□□ 0.78
SMARCD3-203ENST00000392811 MOB4Q9Y3A3 225 aa19.91■□□□□ 0.78
SMARCD3-203ENST00000392811 FLNCQ14315 2725 aa19.91■□□□□ 0.78
SMARCD3-203ENST00000392811 CLEC3BP05452 202 aa19.9■□□□□ 0.78
SMARCD3-203ENST00000392811 NOL4LQ96MY1 436 aaPredicted RBP19.9■□□□□ 0.78
SMARCD3-203ENST00000392811 SPOCK3Q9BQ16 436 aa19.9■□□□□ 0.78
SMARCD3-203ENST00000392811 TRAV20A0A0B4J274 112 aa19.9■□□□□ 0.78
SMARCD3-203ENST00000392811 ZNF253O75346 499 aa19.9■□□□□ 0.78
SMARCD3-203ENST00000392811 GFRA4Q9GZZ7 299 aa19.9■□□□□ 0.78
SMARCD3-203ENST00000392811 PSG9Q00887 426 aa19.89■□□□□ 0.77
SMARCD3-203ENST00000392811 IQCJQ1A5X6 159 aa19.89■□□□□ 0.77
SMARCD3-203ENST00000392811 TOMM20LQ6UXN7 152 aa19.89■□□□□ 0.77
SMARCD3-203ENST00000392811 PGLYRP4Q96LB8 373 aa19.89■□□□□ 0.77
SMARCD3-203ENST00000392811 CCDC140Q96MF4 163 aa19.89■□□□□ 0.77
SMARCD3-203ENST00000392811 RCHY1Q96PM5 261 aa19.89■□□□□ 0.77
SMARCD3-203ENST00000392811 SSBP4Q9BWG4 385 aaPredicted RBP19.89■□□□□ 0.77
SMARCD3-203ENST00000392811 CACNA1BQ00975 2339 aa19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 USP9XQ93008 2570 aaPredicted RBP19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 IGHV4-38-2P0DP08 117 aa19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 C16orf54Q6UWD8 224 aa19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 Q6ZWC4 215 aa19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 OR4B1Q8NGF8 309 aa19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 SMAD5-AS1Q9Y6J3 95 aa19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 TSTD3H0UI37 97 aa19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 SCGB1D1O95968 90 aa19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 OR2D3Q8NGH3 330 aa19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 SAMD10Q9BYL1 202 aa19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 MEGF9Q9H1U4 602 aa19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 ZFAND3Q9H8U3 227 aa19.88■□□□□ 0.77
SMARCD3-203ENST00000392811 HBBP68871 147 aa19.87■□□□□ 0.77
SMARCD3-203ENST00000392811 CLEC19AQ6UXS0 136 aa19.87■□□□□ 0.77
SMARCD3-203ENST00000392811 RBPMS2Q6ZRY4 209 aaKnown RBP19.87■□□□□ 0.77
SMARCD3-203ENST00000392811 SOX21Q9Y651 276 aaPredicted RBP19.86■□□□□ 0.77
SMARCD3-203ENST00000392811 FAM231BA6NCW3 169 aa19.86■□□□□ 0.77
SMARCD3-203ENST00000392811 CD33P20138 364 aa19.86■□□□□ 0.77
SMARCD3-203ENST00000392811 CSN1S1P47710 185 aa19.86■□□□□ 0.77
SMARCD3-203ENST00000392811 ZNF664Q8N3J9 261 aa19.86■□□□□ 0.77
SMARCD3-203ENST00000392811 EEF1AKMT3Q96AZ1 226 aa19.86■□□□□ 0.77
SMARCD3-203ENST00000392811 PRB1P04280 392 aa19.85■□□□□ 0.77
SMARCD3-203ENST00000392811 C18orf32Q8TCD1 76 aa19.85■□□□□ 0.77
SMARCD3-203ENST00000392811 KCNS1Q96KK3 526 aa19.85■□□□□ 0.77
SMARCD3-203ENST00000392811 NAGKQ9UJ70 344 aa19.85■□□□□ 0.77
SMARCD3-203ENST00000392811 MSMBP08118 114 aa19.85■□□□□ 0.77
SMARCD3-203ENST00000392811 S100A7P31151 101 aa19.85■□□□□ 0.77
SMARCD3-203ENST00000392811 TRAV41A0A0B4J266 112 aa19.84■□□□□ 0.77
SMARCD3-203ENST00000392811 A0A1W2PS18 150 aa19.84■□□□□ 0.77
SMARCD3-203ENST00000392811 GPX1P07203 203 aa19.84■□□□□ 0.77
SMARCD3-203ENST00000392811 C19orf54Q5BKX5 351 aa19.84■□□□□ 0.77
SMARCD3-203ENST00000392811 NRGNQ92686 78 aa19.84■□□□□ 0.77
SMARCD3-203ENST00000392811 SERTM2A0A1B0GWG4 89 aa19.83■□□□□ 0.77
SMARCD3-203ENST00000392811 CRIP1P50238 77 aa19.83■□□□□ 0.77
SMARCD3-203ENST00000392811 PRR31Q5SQ13 230 aa19.83■□□□□ 0.77
SMARCD3-203ENST00000392811 SIGLECL1Q8N7X8 197 aa19.83■□□□□ 0.77
SMARCD3-203ENST00000392811 C8orf49Q96NF6 230 aa19.83■□□□□ 0.77
SMARCD3-203ENST00000392811 LINC00527Q9UJ94 153 aa19.83■□□□□ 0.77
SMARCD3-203ENST00000392811 VPS13CQ709C8 3753 aa19.83■□□□□ 0.77
SMARCD3-203ENST00000392811 TRBV7-1A0A0A6YYK4 115 aa19.83■□□□□ 0.76
SMARCD3-203ENST00000392811 IGKV2-40A0A087WW87 121 aaPredicted RBP19.82■□□□□ 0.76
SMARCD3-203ENST00000392811 IGKV2D-40P01614 121 aaPredicted RBP19.82■□□□□ 0.76
SMARCD3-203ENST00000392811 DDTP30046 118 aa19.82■□□□□ 0.76
SMARCD3-203ENST00000392811 ALKBH7Q9BT30 221 aaPredicted RBP19.82■□□□□ 0.76
SMARCD3-203ENST00000392811 A8MWP6 167 aa19.81■□□□□ 0.76
SMARCD3-203ENST00000392811 CRIP2P52943 208 aaPredicted RBP19.81■□□□□ 0.76
SMARCD3-203ENST00000392811 IGFL4Q6B9Z1 124 aa19.81■□□□□ 0.76
SMARCD3-203ENST00000392811 CLPSL1A2RUU4 121 aa19.81■□□□□ 0.76
SMARCD3-203ENST00000392811 CHEK1O14757 476 aa19.81■□□□□ 0.76
SMARCD3-203ENST00000392811 BUB3O43684 328 aa19.81■□□□□ 0.76
SMARCD3-203ENST00000392811 PAX1P15863 534 aa19.81■□□□□ 0.76
SMARCD3-203ENST00000392811 ATP5G2Q06055 141 aa19.81■□□□□ 0.76
SMARCD3-203ENST00000392811 ARL6IP6Q8N6S5 226 aa19.81■□□□□ 0.76
SMARCD3-203ENST00000392811 SPG11Q96JI7 2443 aa19.8■□□□□ 0.76
SMARCD3-203ENST00000392811 IGHG4P01861 327 aa19.8■□□□□ 0.76
SMARCD3-203ENST00000392811 AMTP48728 403 aa19.8■□□□□ 0.76
SMARCD3-203ENST00000392811 KLF5Q13887 457 aaPredicted RBP19.8■□□□□ 0.76
SMARCD3-203ENST00000392811 LY6EQ16553 131 aa19.8■□□□□ 0.76
SMARCD3-203ENST00000392811 USP24Q9UPU5 2620 aa19.8■□□□□ 0.76
SMARCD3-203ENST00000392811 PMCHP20382 165 aa19.8■□□□□ 0.76
SMARCD3-203ENST00000392811 HLA-DMBP28068 263 aa19.8■□□□□ 0.76
SMARCD3-203ENST00000392811 FOXA3P55318 350 aaPredicted RBP19.8■□□□□ 0.76
SMARCD3-203ENST00000392811 APOHP02749 345 aaPredicted RBP19.79■□□□□ 0.76
SMARCD3-203ENST00000392811 RAB9AP51151 201 aa19.79■□□□□ 0.76
SMARCD3-203ENST00000392811 DEFA6Q01524 100 aa19.79■□□□□ 0.76
SMARCD3-203ENST00000392811 ZNF324O75467 553 aaPredicted RBP19.78■□□□□ 0.76
SMARCD3-203ENST00000392811 CT45A10P0DMU9 189 aa19.78■□□□□ 0.76
SMARCD3-203ENST00000392811 BBC3Q96PG8 261 aaPredicted RBP19.78■□□□□ 0.76
SMARCD3-203ENST00000392811 RNF114Q9Y508 228 aa19.78■□□□□ 0.76
SMARCD3-203ENST00000392811 ZNF705FA8MVS1 300 aaPredicted RBP19.78■□□□□ 0.76
SMARCD3-203ENST00000392811 H3BUX3 64 aa19.78■□□□□ 0.76
SMARCD3-203ENST00000392811 ZNF705DP0CH99 300 aaPredicted RBP19.78■□□□□ 0.76
SMARCD3-203ENST00000392811 ZNF705BP0CI00 300 aaPredicted RBP19.78■□□□□ 0.76
SMARCD3-203ENST00000392811 HIF1ANQ9NWT6 349 aa19.78■□□□□ 0.76
SMARCD3-203ENST00000392811 IGHV3-66A0A0C4DH42 116 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms