RNA–Protein interactions for RNA: ENST00000390945.1

RNU6-278P-201, Transcript of RNA, U6 small nuclear 278, pseudogene, humanhuman

BASIC

Gene RNU6-278P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-278P-201ENST00000390945 TMEM70Q9BUB7 260 aa0.63□□□□□ -2.31
RNU6-278P-201ENST00000390945 RTL8AQ9BWD3 113 aa0.63□□□□□ -2.31
RNU6-278P-201ENST00000390945 ZNF462Q96JM2 2506 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 RIIAD1A6NNX1 92 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 ERC2-IT1O76042 136 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 CXCL1P09341 107 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 CXCL8P10145 99 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 ARPP19P56211 112 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 BASP1P80723 227 aaKnown RBP0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 AKR1C8PQ5T2L2 129 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 EIF5AL1Q6IS14 154 aaKnown RBP0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 OR13C6PQ8NH95 151 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 BORCS5Q969J3 196 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 ZC2HC1AQ96GY0 325 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 HOPXQ9BPY8 73 aaPredicted RBP0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 SSR3Q9UNL2 185 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 ANK1P16157 1881 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 TECPR2O15040 1411 aa0.62□□□□□ -2.31
RNU6-278P-201ENST00000390945 TENM3Q9P273 2699 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 FER1L6Q2WGJ9 1857 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 ZDBF2Q9HCK1 2354 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 K7ERJ3 54 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 CD2P06729 351 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 OR10J4P0C629 311 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 EFNA4P52798 201 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 CDK6Q00534 326 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 HAGHLQ6PII5 290 aaPredicted RBP0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 PHF5AQ7RTV0 110 aaKnown RBP0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 ARPINQ7Z6K5 226 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 MALSU1Q96EH3 234 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 HYLS1Q96M11 299 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 BOLA2Q9H3K6 86 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 MUC4Q99102 2169 aa0.61□□□□□ -2.31
RNU6-278P-201ENST00000390945 RTL9Q8NET4 1388 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 CTTNBP2Q8WZ74 1663 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 M0R233 179 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 DNAL4O96015 105 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 IFNA14P01570 189 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 APOA2P02652 100 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 OGNP20774 298 aaKnown RBP0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 RAB5CP51148 216 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 TAS2R41P59536 307 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 KLRD1Q13241 179 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 C1orf140Q5VVS0 124 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 RAB37Q96AX2 223 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 ZHX1-C8orf76Q96EF9 292 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 GGACTQ9BVM4 153 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 ASH1LQ9NR48 2969 aaKnown RBP0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 OR52A1Q9UKL2 312 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 KIAA1107Q9UPP5 1409 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 TRAPPC8Q9Y2L5 1435 aa0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 TCOF1Q13428 1488 aaKnown RBP0.6□□□□□ -2.31
RNU6-278P-201ENST00000390945 TRAV27A0A087WT01 109 aa0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 ODAMA1E959 279 aa0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 HIST1H2BKO60814 126 aa0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 HIST1H2BJP06899 126 aa0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 COX7CP15954 63 aa0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 SNCBQ16143 134 aa0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 KRTAP19-3Q7Z4W3 81 aa0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 CHCHD1Q96BP2 118 aaKnown RBP0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 PBDC1Q9BVG4 233 aa0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 OR2H1Q9GZK4 316 aa0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 CACYBPQ9HB71 228 aaKnown RBP0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 IL20Q9NYY1 176 aa0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 TMEM14CQ9P0S9 112 aa0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 UFC1Q9Y3C8 167 aa0.59□□□□□ -2.31
RNU6-278P-201ENST00000390945 WDR97A6NE52 1622 aa0.59□□□□□ -2.32
RNU6-278P-201ENST00000390945 hDV103S1A0JD37 113 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 NCR3O14931 201 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 PIAS1O75925 651 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 PPP1R2P41236 205 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 TMBIM6P55061 237 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 MSMO1Q15800 293 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 LTC4SQ16873 150 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 PPP1R2P3Q6NXS1 205 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 LINC00575Q6W349 94 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 PRR15Q8IV56 129 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 CARD19Q96LW7 228 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 MAP1LC3BQ9GZQ8 125 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 RNF11Q9Y3C5 154 aa0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 XIRP1Q702N8 1843 aaKnown RBP0.58□□□□□ -2.32
RNU6-278P-201ENST00000390945 IGLV3-32A0A0A0MS00 114 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 E5RI56 91 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 F8W1H4 67 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 IFNA4P05014 189 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 IDO1P14902 403 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 CRYBA4P53673 196 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 VBP1P61758 197 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 FKBP1CQ5VVH2 108 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 PSMF1Q92530 271 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 TAF9BQ9HBM6 251 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 BIN3Q9NQY0 253 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 MYH1P12882 1939 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 TANC2Q9HCD6 1990 aa0.57□□□□□ -2.32
RNU6-278P-201ENST00000390945 C9orf170A2RU37 121 aa0.56□□□□□ -2.32
RNU6-278P-201ENST00000390945 RER1O15258 196 aa0.56□□□□□ -2.32
RNU6-278P-201ENST00000390945 KLF7O75840 302 aaPredicted RBP0.56□□□□□ -2.32
RNU6-278P-201ENST00000390945 PRB4P10163 310 aaPredicted RBP0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms